Query= MSMg01no459_m23.b1 MSMg01no459_m23.b1 CHROMAT_FILE:
MSMg01no459_m23.b1 PHD_FILE: MSMg01no459_m23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:32:52 2005
(440 letters)
>mm_chr9_83377714_83378553
Length = 840
Score = 685 bits (354), Expect = 0.0
Identities = 363/366 (99%), Gaps = 2/366 (0%)
Strand = Plus / Minus
Query: 7 gaattcatgttg-tcccactgggaaactcactgttaagttcaagaggaagaatgactaca 65
|||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 gaattcatgttgat-ccactgggaaactcactgttaagttcaagaggaagaatgactaca 307
Query: 66 ccaaggagaaacccagccacatggcagttgattaatttagttttaagagaatgaaaatct 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 ccaaggagaaacccagccacatggcagttgattaatttagttttaagagaatgaaaatct 247
Query: 126 gggaagaaaaatgtcccaacaacttgtgctataaaggaaagctgtggatttaacttggtg 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 gggaagaaaaatgtcccaacaacttgtgctataaaggaaagctgtggatttaacttggtg 187
Query: 186 aagtgcttgcctaacatccgcaaagccttggcaactatccttgtgaaactgggtgtggtg 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 aagtgcttgcctaacatccgcaaagccttggcaactatccttgtgaaactgggtgtggtg 127
Query: 246 gcacaaacctgttatcctagcactaggaaaggtgtaagcagaaacataagacactcaggg 305
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 126 gcacaaacctgttatcctagcactaggaaaggtggaagcagaaacataagacactcaggg 67
Query: 306 ttatcctcaccgacgtagcaagttggagcccagcttatcttgtattgaaagacaaagcaa 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66 ttatcctcaccgacgtagcaagttggagcccagcttatcttgtattgaaagacaaagcaa 7
Query: 366 tgtatg 371
||||||
Sbjct: 6 tgtatg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 440
Length of database: 840
Length adjustment: 9
Effective length of query: 431
Effective length of database: 831
Effective search space: 358161
Effective search space used: 358161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no459_m23.g1 MSMg01no459_m23.g1 CHROMAT_FILE:
MSMg01no459_m23.g1 PHD_FILE: MSMg01no459_m23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:32:52 2005
(333 letters)
>mm_chr9_83163710_83164441
Length = 732
Score = 555 bits (287), Expect = e-162
Identities = 324/339 (95%), Gaps = 8/339 (2%)
Strand = Plus / Plus
Query: 1 attggaaagtgaaaaagaaaagacaagcagaacagagaaaccacatttgagcccgatgta 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 201 attggaaagtgaaaaagaaaagacaagcagaacagagaaaccacgtttgagcccgatgta 260
Query: 61 ctcattaagtgttcaattttgagtgtctcttgtaattgtaaccatcaaaatgctcccaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 261 ctcattaagtgttcaattttgagtgtctcttgtaattgtaaccatcaaaatgcccccaaa 320
Query: 121 gccaaggcaaggctctatcttactgacaacagtgtttcctctccactgtgcttgactgtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gccaaggcaaggctctatcttactgacaacagtgtttcctctccactgtgcttgactgtg 380
Query: 181 cagtcgccatgactctcctgtgagtgcgtggtcatgaacttctcacggggg-ggcgggg- 238
||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct: 381 cagtcgccatgactctcctgtgagtgcgtggtcatgaacttctcacgggggtgggggggt 440
Query: 239 ggggtaa----atacagccaaccgaggcggccaaagacacccaaacgcctgccctgacta 294
|||| | || ||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct: 441 gggg--aggggatgcagccaaccgaagcggccaaagacacccaaacgcctgccctgacca 498
Query: 295 gaggcaggcgccactacgatgagcaaatatgtgatgtag 333
||||||||||||||||| |||||||||||||||||||||
Sbjct: 499 gaggcaggcgccactacaatgagcaaatatgtgatgtag 537
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 333
Length of database: 732
Length adjustment: 9
Effective length of query: 324
Effective length of database: 723
Effective search space: 234252
Effective search space used: 234252
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
