Query= MSMg01no460_d22.b1 MSMg01no460_d22.b1 CHROMAT_FILE:
MSMg01no460_d22.b1 PHD_FILE: MSMg01no460_d22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:33:26 2005
(453 letters)
>mm_chr9_29591593_29592446
Length = 854
Score = 832 bits (430), Expect = 0.0
Identities = 448/454 (98%), Gaps = 1/454 (0%)
Strand = Plus / Minus
Query: 1 atctaacaaacattattctaaatacactgcagcaagtatagtaatcaaatcccccctatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 atctaacaaacattattctaaatacactgcagcaagtatagtaatcaaatcccccctatc 595
Query: 61 aaatatctattaaatagatatccttctgactgatttctagatggaaaaactgagacttag 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 594 aaatatctattaaatagatatccttctgactgatttctagatggaaaaactgaggcttag 535
Query: 121 accagagatgtaggcccagctggcagagtagcagtgtgcctggttcacatgagtgatgct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 accagagatgtaggcccagctggcagagtagcagtgtgcctggttcacatgagtgatgct 475
Query: 181 gattccaggtcatttgccatctcctgggtatgaagatggactggaacctgagatgacctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 gattccaggtcatttgccatctcctgggtatgaagatggactggaacctgagatgacctt 415
Query: 241 tagaaaatcgtgtcataactttcatagaggatagtaggtcataaaggagagactcctcag 300
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 tagaaaaccgtgtcataactttcatagaggatagtaggtcataaaggagagactcctcag 355
Query: 301 gtagccaagaaagtcagttaatctttcaaaactacacagagaaagaaggaa-tgaacttt 359
|||||||||||||||||||||||||||||||||||||||||||| || ||| ||||||||
Sbjct: 354 gtagccaagaaagtcagttaatctttcaaaactacacagagaaaaaaagaaatgaacttt 295
Query: 360 gacagtgaagggacacaggtgatgtggaaatgctgtcagatgttccttaagggaaaaata 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 gacagtgaagggacacaggtgatgtggaaatgctgtcagatgttccttaagggaaaaata 235
Query: 420 aaaaagactttatgactacagttggcaaagcagt 453
|||||||||||||||| |||||||||||||||||
Sbjct: 234 aaaaagactttatgaccacagttggcaaagcagt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 453
Length of database: 854
Length adjustment: 10
Effective length of query: 443
Effective length of database: 844
Effective search space: 373892
Effective search space used: 373892
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no460_d22.g1 MSMg01no460_d22.g1 CHROMAT_FILE:
MSMg01no460_d22.g1 PHD_FILE: MSMg01no460_d22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:33:26 2005
(426 letters)
>mm_chr9_29442339_29443164
Length = 826
Score = 816 bits (422), Expect = 0.0
Identities = 425/426 (99%)
Strand = Plus / Plus
Query: 1 ttgaatttcttctctttaacagatgtgtttctgggcagcctactccctgaacacatcttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttgaatttcttctctttaacagatgtgtttctgggcagcctactccctgaacacatcttc 260
Query: 61 tgttgattcttctgccccaaactcacagtttatagcattgttactcctagaatgtttaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgttgattcttctgccccaaactcacagtttatagcattgttactcctagaatgtttaaa 320
Query: 121 agccatcaaagctggcattcctcccttctactatgttgctttttgcagtgttcttcctca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agccatcaaagctggcattcctcccttctactatgttgctttttgcagtgttcttcctca 380
Query: 181 aaaaaataaaataaaataaaataaatgaacaacaccaaaaacattttcaaatcacttaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaaaaataaaataaaataaaataaatgaacaacaccaaaaacattttcaaatcacttaca 440
Query: 241 agaaaccaagtcactttcaaaagtgttcatctcaaaccatttaggagtattccccttcct 300
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 441 agaaaccaagtcactttcaaaagtgttcatctcaaaccatttagcagtattccccttcct 500
Query: 301 gtgtttattgatgctgttctgttctgtcttttctaatcctacaatgatgccccagcctct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtgtttattgatgctgttctgttctgtcttttctaatcctacaatgatgccccagcctct 560
Query: 361 gcaggccctgtccctggtctctcaaatagagcgggttactatctgagctctcccacctgc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gcaggccctgtccctggtctctcaaatagagcgggttactatctgagctctcccacctgc 620
Query: 421 ttgctg 426
||||||
Sbjct: 621 ttgctg 626
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 426
Length of database: 826
Length adjustment: 9
Effective length of query: 417
Effective length of database: 817
Effective search space: 340689
Effective search space used: 340689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
