Query= MSMg01no461_a11.b1 MSMg01no461_a11.b1 CHROMAT_FILE:
MSMg01no461_a11.b1 PHD_FILE: MSMg01no461_a11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:34:28 2005
(360 letters)
>mm_chr9_108647791_108648550
Length = 760
Score = 642 bits (332), Expect = 0.0
Identities = 353/364 (96%), Gaps = 8/364 (2%)
Strand = Plus / Minus
Query: 1 acctagaactgaacaagagtcatcagaataagtcaggccagttacaggaaagacaataaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 acctagaactgaacaagagtcatcagaataagtcaggccagttacaggaaagacaataaa 501
Query: 61 acccctgtatattagtaatgcacaaagaattttcttttccatgtttagaatgtttattag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 acccctgtatattagtaatgcacaaagaattttcttttccatgtttagaatgtttattag 441
Query: 121 cctatttcagccatacatgataatggtttttatcatggtatcttcacacatgcatgattt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 cctatttcagccatacatgataatggtttttatcatggtatcttcacacatgcatgattt 381
Query: 181 tgaccatgtccatccctcactacctgccgcccactctcactccaacccatcccccttctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tgaccatgtccatccctcactacctgccgcccactctcactccaacccatcccccttctt 321
Query: 241 c----cttgttttttcccaccctgctcttctgatttcatgtctttttggtaggaaggggg 296
| || | |||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 320 cccagctag----ttcccaccctgctcttctgatttcatgtctttttgggaggaaggggg 265
Query: 297 agatagaatttaatcaggattatgtctccctcctccagctgccattagctgcctaaagtt 356
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 264 agatagaatttaatcaggattatgtctccctcctccagctgccattagttgcctaaagtt 205
Query: 357 ggag 360
||||
Sbjct: 204 ggag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 360
Length of database: 760
Length adjustment: 9
Effective length of query: 351
Effective length of database: 751
Effective search space: 263601
Effective search space used: 263601
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no461_a11.g1 MSMg01no461_a11.g1 CHROMAT_FILE:
MSMg01no461_a11.g1 PHD_FILE: MSMg01no461_a11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:34:28 2005
(231 letters)
>mm_chr9_108443549_108444179
Length = 631
Score = 447 bits (231), Expect = e-130
Identities = 231/231 (100%)
Strand = Plus / Plus
Query: 1 agtccatccagaccctcagaaccgtagagtggaaagagaactgttgcagtctgagctgag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtccatccagaccctcagaaccgtagagtggaaagagaactgttgcagtctgagctgag 260
Query: 61 gagtgccgctttggcttagttacattgctgcttctgttgtccccagagccagatagactc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gagtgccgctttggcttagttacattgctgcttctgttgtccccagagccagatagactc 320
Query: 121 tccaaagcatgaaaacgggacagcaagaattggttttggttgttgtttttgtttttccca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tccaaagcatgaaaacgggacagcaagaattggttttggttgttgtttttgtttttccca 380
Query: 181 attgaatagcagttaagtttcatttgctggtatttttactaaaagtcctaa 231
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 attgaatagcagttaagtttcatttgctggtatttttactaaaagtcctaa 431
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 231
Length of database: 631
Length adjustment: 9
Effective length of query: 222
Effective length of database: 622
Effective search space: 138084
Effective search space used: 138084
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
