Query= MSMg01no461_p05.b1 MSMg01no461_p05.b1 CHROMAT_FILE:
MSMg01no461_p05.b1 PHD_FILE: MSMg01no461_p05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:35:45 2005
(323 letters)
>mm_chr9_7183647_7184369
Length = 723
Score = 543 bits (281), Expect = e-159
Identities = 304/323 (94%), Gaps = 18/323 (5%)
Strand = Plus / Plus
Query: 1 atccaggactcattacaacaaccggtttttttctttctccttgactagattagggtccca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atccaggactcattacaacaaccggtttttttctttctccttgactagattagggtccca 260
Query: 61 cgatgcagtcacagaaccacagggatagaatttaaagaaacagtcttctgtcacagttgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cgatgcagtcacagaaccacagggatagaatttaaagaaacagtcttctgtcacagttgg 320
Query: 121 gttacaaacatggacttcattcactaagaatcttctatgagataattttacctagcaaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gttacaaacatggacttcattcactaagaatcttctatgagataattttacctagcaaac 380
Query: 181 ctttcttataagcagtatttccattagaagtgacgtgattactgtttcttgagagcagcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctttcttataagcagtatttccattagaagtgacgtgattactgtttcttgagagcagcc 440
Query: 241 cattatatttttttcccccattagaacagttccccaaatcctctgtaataagtcagtccg 300
||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 441 catta------------------gaacagttccccaaatcctctgtaataagtcagtccg 482
Query: 301 tttcccagtctcttatcctagag 323
|||||||||||||||||| ||||
Sbjct: 483 tttcccagtctcttatccaagag 505
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 323
Length of database: 723
Length adjustment: 9
Effective length of query: 314
Effective length of database: 714
Effective search space: 224196
Effective search space used: 224196
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no461_p05.g1 MSMg01no461_p05.g1 CHROMAT_FILE:
MSMg01no461_p05.g1 PHD_FILE: MSMg01no461_p05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:35:45 2005
(415 letters)
>mm_chr9_7348070_7348885
Length = 816
Score = 789 bits (408), Expect = 0.0
Identities = 414/416 (99%), Gaps = 1/416 (0%)
Strand = Plus / Minus
Query: 1 tgtcctttccataatcataaaatcttgacaagtaccactagataaaacacaagcattgca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 tgtcctttccataatcataaaatcttgacaagtaccactagataaaacacaagcattgca 493
Query: 61 cacggttgtatgcagccaggtttctgctgggaaccctgcaaacatggtcagtagtatact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 cacggttgtatgcagccaggtttctgctgggaaccctgcaaacatggtcagtagtatact 433
Query: 121 gatattctagaaccaggtattttaatcacaggctacattattattattattattacctag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 gatattctagaaccaggtattttaatcacaggctacattattattattattattacctag 373
Query: 181 ggaatcaattataaggagg-aaaaataatttcctacgctatttaaaacataaatgattag 239
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 ggaatcaattataaggaggaaaaaataatttcctacgctatttaaaacataaatgattag 313
Query: 240 tcagattaccaaaattccagaggaagaactatttattattctccttcttcagacctgctt 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 tcagattaccaaaattccagaggaagaactatttattattctccttcttcagacctgctt 253
Query: 300 ctaggtttttaaggagccattttagcatctagtatatacgggtacttgattggggaaggt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 ctaggtttttaaggagccattttagcatctagtatatacgggtacttgattggggaaggt 193
Query: 360 agtttagtggtacagcaattatctagcatgctagcaggtctagggctagtccccag 415
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 192 agtttagtggtacagcaattatctagcatgctagcaggtctagggttagtccccag 137
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 415
Length of database: 816
Length adjustment: 9
Effective length of query: 406
Effective length of database: 807
Effective search space: 327642
Effective search space used: 327642
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
