Query= MSMg01no463_j23.b1 MSMg01no463_j23.b1 CHROMAT_FILE:
MSMg01no463_j23.b1 PHD_FILE: MSMg01no463_j23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:38:06 2005
(457 letters)
>mm_chr9_98401598_98402450
Length = 853
Score = 772 bits (399), Expect = 0.0
Identities = 434/457 (94%), Gaps = 19/457 (4%)
Strand = Plus / Plus
Query: 1 catgtctgtccctctggcctttcctgatccttaaaaatacttgtcaacaccccacccctc 60
||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 201 catgtctgtccttctggcctttcctgatccttaaaaatacttgtcaacagcccacccctc 260
Query: 61 cccccaccgttctcattctccctcctctctaagatcatcatttaacatcactgcagggaa 120
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 261 cccccaccgttctcattctccctcct----aagatcatcatttaacatcactgcagggaa 316
Query: 121 caatgatcctttcacccataccttgtctcctctttgcctgtaacagaaagccagggatag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 caatgatcctttcacccataccttgtctcctctttgcctgtaacagaaagccagggatag 376
Query: 181 caatctctttctctccatctccatctctgtctctgtctttcacacacacacacacacaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 caatctctttctctccatctccatctctgtctctgtctttcacacacacacacacacaca 436
Query: 241 cacacacacacatttttttcacacacacacacacacaactggtaggatgagatatatttg 300
|||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 437 cacacacacaca---------------cacacacacaactggtaggatgagatatatttg 481
Query: 301 actagagactgaacaaaggtctaatcccatgagaattacagctcagagcaggtgcccttg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 actagagactgaacaaaggtctaatcccatgagaattacagctcagagcaggtgcccttg 541
Query: 361 ggatcatttactgcctctaacaggaatagaaccctttaactctgaggagcacatgagccc 420
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 ggatcatctactgcctctaacaggaatagaaccctttaactctgaggagcacatgagccc 601
Query: 421 cgcccctcctcacgagctgcgtgtgtacacacgtgta 457
| |||||||||||||||||||||||||||||||||||
Sbjct: 602 cacccctcctcacgagctgcgtgtgtacacacgtgta 638
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 54
Number of extensions: 12
Number of successful extensions: 12
Number of sequences better than 10.0: 1
Number of HSP's gapped: 6
Number of HSP's successfully gapped: 1
Length of query: 457
Length of database: 853
Length adjustment: 10
Effective length of query: 447
Effective length of database: 843
Effective search space: 376821
Effective search space used: 376821
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no463_j23.g1 MSMg01no463_j23.g1 CHROMAT_FILE:
MSMg01no463_j23.g1 PHD_FILE: MSMg01no463_j23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:38:06 2005
(359 letters)
>mm_chr9_98593354_98594111
Length = 758
Score = 632 bits (327), Expect = 0.0
Identities = 351/359 (97%), Gaps = 3/359 (0%)
Strand = Plus / Minus
Query: 1 ccttctaaatacttaatcactctcataatttagtaatagatcttcataatttaaaaactt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 ccttctaaatacttaatcactctcataatttagtaatagatcttcataatttaaaaactt 430
Query: 61 tacctctattgtaactcttaatgatgtcttccctcttatcctgtattttgcttgtaattt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 tacctctattgtaactcttaatgatgtcttccctcttatcctgtattttgcttgtaattt 370
Query: 121 tgtctctttttttcctttaacggtcttgagaatttgtcagttttgtttatttgtgaaatt 180
|||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| |
Sbjct: 369 tgtctc-ttttttcctttaacggtcttgagaatttgtcagttttatttatttgtgaaaat 311
Query: 181 tttatctgtcaatgcttctaagtagccaagctaatagtttcttaaaaagttattgagatg 240
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 310 tttatctgtcaatgcttctaagtaaccaagctaatagtttcttaaaaagttattgagatg 251
Query: 241 ttttctattttgtttatttcttcctttgtaattttacattattttatgtctttttttttc 300
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 250 ttttctattttgttgatttcttcctttgtaattttacattattttatgtctttttttt-c 192
Query: 301 ttttttttttttttacatttagcaggatgtgtgtgtagggtatgtgtgtgtgtgtatgt 359
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 atttttttttttt-acatttagcaggatgtgtgtgtagggtatgtgtgtgtgtgtatgt 134
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 359
Length of database: 758
Length adjustment: 9
Effective length of query: 350
Effective length of database: 749
Effective search space: 262150
Effective search space used: 262150
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
