Query= MSMg01no474_e07.b1 MSMg01no474_e07.b1 CHROMAT_FILE:
MSMg01no474_e07.b1 PHD_FILE: MSMg01no474_e07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:52:39 2005
(224 letters)
>mm_chr9_89543146_89543769
Length = 624
Score = 381 bits (197), Expect = e-110
Identities = 218/227 (96%), Gaps = 6/227 (2%)
Strand = Plus / Plus
Query: 1 gtataaaaactattaatactgcctatcagtaatgatttcaggacagtttactgcagcagg 60
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gtataaaaactaataatactgcctatcagtaatgatttcaggacagtttactgcagcagg 260
Query: 61 aactccagtttgctgaaacgatctgactaattctctcttccatcttaacaaggcaatacc 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 261 aactccagtttgctgaaacgatctgactaattctctcttccatcttaacaaggcaagacc 320
Query: 121 tggctgccaaagtgaaggttctgctacccaagtggtctgctgtctatttccaacaccttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tggctgccaaagtgaaggttctgctacccaagtggtctgctgtctatttccaacaccttt 380
Query: 181 gttat---tgtttcgcctaccactgggagaactacttggtctcgtga 224
|| || || ||||||||||||||||||||||||||||||||||
Sbjct: 381 gt-atcagtgc--cgcctaccactgggagaactacttggtctcgtga 424
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 224
Length of database: 624
Length adjustment: 9
Effective length of query: 215
Effective length of database: 615
Effective search space: 132225
Effective search space used: 132225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no474_e07.g1 MSMg01no474_e07.g1 CHROMAT_FILE:
MSMg01no474_e07.g1 PHD_FILE: MSMg01no474_e07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:52:39 2005
(240 letters)
>mm_chr9_89700021_89700661
Length = 641
Score = 439 bits (227), Expect = e-128
Identities = 236/239 (98%), Gaps = 1/239 (0%)
Strand = Plus / Minus
Query: 1 aataggatggccataag-aatacacatgttaagcaactttatatactgacctgtgagctt 59
||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 439 aataggatggccataagaaatacacatgttaagcaactttagatactgacctgtgagctt 380
Query: 60 tgtgtgtgtgccagaggagcaaagtgacaagagtggccttggcaatgaacttctacctgc 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 tgtgtgtgtgccagaggagcaaagtgacaagagtggccttggcaatgaacttctacctgc 320
Query: 120 tctagcatcacctttcagttatggaggcaaagtaggagccatctttgaagatgcactgga 179
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 319 tctagcatcacctttcagttatggaggcaaagtaggagccatctttgaagatgcgctgga 260
Query: 180 gttttgagtacttgtgagttttcgtgtatttagagacactccaccagggttgtggcaaa 238
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 gttttgagtacttgtgagttttcgtgtatttagagacactccaccagggttgtggcaaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 240
Length of database: 641
Length adjustment: 9
Effective length of query: 231
Effective length of database: 632
Effective search space: 145992
Effective search space used: 145992
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
