Query= MSMg01no475_a16.b1 MSMg01no475_a16.b1 CHROMAT_FILE:
MSMg01no475_a16.b1 PHD_FILE: MSMg01no475_a16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:53:41 2005
(464 letters)
>mm_chr9_52668384_52669248
Length = 865
Score = 843 bits (436), Expect = 0.0
Identities = 454/460 (98%), Gaps = 1/460 (0%)
Strand = Plus / Minus
Query: 6 gaattcagctggcttg-catctcctttgctctgggtgatggtttaattctcaggaaaata 64
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 gaattcagctggcttgaaatctcctttgctctgggtgatggtttaattctcaggaaaata 606
Query: 65 catggggtctgcagctcaattgatgtcagcctgagcatgtgtgttgtagtgatcgaagtg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 catggggtctgcagctcaattgatgtcagcctgagcatgtgtgttgtagtgatcgaagtg 546
Query: 125 tttctcttgggattctcattttccttttaaggaactcatcaagatttataataaaatcat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 tttctcttgggattctcattttccttttaaggaactcatcaagatttataataaaatcat 486
Query: 185 tcaggtttggaagaatcccctgcagcagataaaagcttgaatcatctctgggattcccct 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 tcaggtttggaagaatcccctgcagcagataaaagcttgaatcatctctgggattcccct 426
Query: 245 ttgagatttgcattcaaccatgagaccggaagtcttataatgggtgtttataaaggtggt 304
|||||||||||||||||||||||||||||| ||| | ||||||||||||||||||||||
Sbjct: 425 ttgagatttgcattcaaccatgagaccggaggtcggaaaatgggtgtttataaaggtggt 366
Query: 305 tgaaaaggaattgttaaagggattttctaacaaaatggagtcaaactcactacgttggtg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 tgaaaaggaattgttaaagggattttctaacaaaatggagtcaaactcactacgttggtg 306
Query: 365 ctggtctttgaagtgagggcccagctttgatctgttcagacttcacacaatagcttcact 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 ctggtctttgaagtgagggcccagctttgatctgttcagacttcacacaatagcttcact 246
Query: 425 gtatagcatgacttatcatttatcttgctcctggagaata 464
||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 gtatagcatgacttatcatttatcttgctcctggagaata 206
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 464
Length of database: 865
Length adjustment: 10
Effective length of query: 454
Effective length of database: 855
Effective search space: 388170
Effective search space used: 388170
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no475_a16.g1 MSMg01no475_a16.g1 CHROMAT_FILE:
MSMg01no475_a16.g1 PHD_FILE: MSMg01no475_a16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:53:41 2005
(244 letters)
>mm_chr9_52523342_52523985
Length = 644
Score = 472 bits (244), Expect = e-138
Identities = 244/244 (100%)
Strand = Plus / Plus
Query: 1 tttgttatggttctacttaaattgggggccaagaaatacttctgtggggacagtagttgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttgttatggttctacttaaattgggggccaagaaatacttctgtggggacagtagttgc 260
Query: 61 cttgtgcaatgtagaatatagagaaatactccaggcttttgacccctggaagtggaagtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cttgtgcaatgtagaatatagagaaatactccaggcttttgacccctggaagtggaagtg 320
Query: 121 gtcaggtttccttaagatgtcagtactatgtcccctaccataccatgacaataaacaaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtcaggtttccttaagatgtcagtactatgtcccctaccataccatgacaataaacaaaa 380
Query: 181 ttgtcttcagtattgtctagttgtcaaatgcctgccaagggaagagaaagtatcctcagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttgtcttcagtattgtctagttgtcaaatgcctgccaagggaagagaaagtatcctcagc 440
Query: 241 agaa 244
||||
Sbjct: 441 agaa 444
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
