Query= MSMg01no475_g22.b1 MSMg01no475_g22.b1 CHROMAT_FILE:
MSMg01no475_g22.b1 PHD_FILE: MSMg01no475_g22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:54:12 2005
(399 letters)
>mm_chr9_27561320_27562118
Length = 799
Score = 706 bits (365), Expect = 0.0
Identities = 389/397 (97%)
Strand = Plus / Plus
Query: 1 tctatcataggtgtctcctgggccaatgtagatgagctcaaattattagatagtttatta 60
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 201 tctatcataggtgtctcctgggccaatgtagatgagctcaaattaagagatagtttatta 260
Query: 61 tggaagattgattatgggtgtgctgctgttcctccagcagggaagaacaattcccatcac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggaagattgattatgggtgtgctgctgttcctccagcagggaagaacaattcccatcac 320
Query: 121 attgccattcttgaagggaagaagtgtttctcctttcctatcttggcatgtttgtcattg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 attgccattcttgaagggaagaagtgtttctcctttcctatcttggcatgtttgtcattg 380
Query: 181 tgtgcctgagataactatcgctgtgagctctgttcagcttctgaagctgagaggttatta 240
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgtgcctgagataactatctctgtgagctctgttcagcttctgaagctgagaggttatta 440
Query: 241 tcacatcccttatatttgatgcatgcaatatgtatgcagccttgtgcccagagagaatca 300
||||||||| | | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcacatcccccagaaatgatgcatgcaatatgtatgcagccttgtgcccagagagaatca 500
Query: 301 ctgtttgaagtcttcatcagtacataaccacctcaacacacgacaacatgtgcttacatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctgtttgaagtcttcatcagtacataaccacctcaacacacgacaacatgtgcttacatt 560
Query: 361 acatttacagtgggtggatatgtatgtatgtatgtat 397
|||||||||||||||||||||||||||||||||||||
Sbjct: 561 acatttacagtgggtggatatgtatgtatgtatgtat 597
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 399
Length of database: 799
Length adjustment: 9
Effective length of query: 390
Effective length of database: 790
Effective search space: 308100
Effective search space used: 308100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no475_g22.g1 MSMg01no475_g22.g1 CHROMAT_FILE:
MSMg01no475_g22.g1 PHD_FILE: MSMg01no475_g22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:54:12 2005
(400 letters)
>mm_chr9_27734091_27734889
Length = 799
Score = 721 bits (373), Expect = 0.0
Identities = 391/397 (98%), Gaps = 1/397 (0%)
Strand = Plus / Minus
Query: 1 tacaggcacccctggttccttagagagtgtggactgtatttgggggaacatgacccacca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 tacaggcacccctggttccttagagagtgtggactgtatttgggggaacatgacccacca 537
Query: 61 ggcagactgtgtctggcagccacaggcttaggatctcagctctactttcagagcccatgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 ggcagactgtgtctggcagccacaggcttaggatctcagctctactttcagagcccatgg 477
Query: 121 tttgttccccaggtttgcccccctactacttgtatatatgtgttctttctgtcataatct 180
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 tttgttccccaggtttg-ccccctactacttgtatatatgtgttctttctgtcataatct 418
Query: 181 gcatttcaaccttccttcctccaccataggatatgagacacagaagacctgaaagttgct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 417 gcatttcaaccttccttcctccaccataggatatgagacacagaagacctgaaagctgct 358
Query: 241 gatcttcacacagatcgactcacctctgcttctagcttcttgtctcgcctagatatttct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 gatcttcacacagatcgactcacctctgcttctagcttcttgtctcgcctagatatttct 298
Query: 301 ctgcagtctggcccaatgcctatggaaccagcccttccacagccttgctgcaagccttga 360
|||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 297 ttgcaatctggcccaatgcctatggaagcagcccttccacagccttgctgcaagccttga 238
Query: 361 gcggagacaacaggatctgtcttgaacctatatctca 397
|| ||||||||||||||||||||||||||||||||||
Sbjct: 237 gcagagacaacaggatctgtcttgaacctatatctca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 400
Length of database: 799
Length adjustment: 9
Effective length of query: 391
Effective length of database: 790
Effective search space: 308890
Effective search space used: 308890
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
