Query= MSMg01no476_i23.b1 MSMg01no476_i23.b1 CHROMAT_FILE:
MSMg01no476_i23.b1 PHD_FILE: MSMg01no476_i23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:55:42 2005
(204 letters)
>mm_chr9_112655487_112656090
Length = 604
Score = 387 bits (200), Expect = e-112
Identities = 203/204 (99%)
Strand = Plus / Plus
Query: 1 atctgaagtgctttaatttggatggtcttgttagtcactggagacaccaaataccaaatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atctgaagtgctttaatttggatggtcttgttagtcactggagacaccaaataccaaatg 260
Query: 61 ctaattagatcataaggcatcataactagctagatggaaatgccagactattaaaggtta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctaattagatcataaggcatcataactagctagatggaaatgccagactattaaaggtta 320
Query: 121 tttagtcatctagcagcaagaactttcccccagaagacatgatatatcctaattttcccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttagtcatctagcagcaagaactttcccccagaagacatgatatatcctaattttcccc 380
Query: 181 ccagatgataaatggaatttagaa 204
|||||||| |||||||||||||||
Sbjct: 381 ccagatgaaaaatggaatttagaa 404
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 204
Length of database: 604
Length adjustment: 8
Effective length of query: 196
Effective length of database: 596
Effective search space: 116816
Effective search space used: 116816
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no476_i23.g1 MSMg01no476_i23.g1 CHROMAT_FILE:
MSMg01no476_i23.g1 PHD_FILE: MSMg01no476_i23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:55:42 2005
(380 letters)
>mm_chr9_112807363_112808143
Length = 781
Score = 714 bits (369), Expect = 0.0
Identities = 378/381 (99%), Gaps = 1/381 (0%)
Strand = Plus / Minus
Query: 1 tgagcctctggttcagcgctggcaccaaaataatgatgttgctattgataaaactgtata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 tgagcctctggttcagcgctggcaccaaaataatgatgttgctattgataaaactgtata 522
Query: 61 tatcacagcactgctgaccccctgtgaaggctactcaaagtgaatattctatgtatttaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 tatcacagcactgctgaccccctgtgaaggctactcaaagtgaatattctatgtatttaa 462
Query: 121 cctgtaatacagatacaggcagaaacaagatacaggcggggagatacctgaggctatctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 cctgtaatacagatacaggcagaaacaagatacaggcggggagatacctgaggctatctt 402
Query: 181 ctgctttcctctagcttcctgtctagatcatggagttctgtcacaggcaaactgtgggtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 ctgctttcctctagcttcctgtctagatcatggagttctgtcacaggcaaactgtgggtt 342
Query: 241 ctgcttttgctttagttattatcttaaagagcttattttagttattttaaatttaagtct 300
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 341 ctgctgttgctttagttattatcttaaagagcttattttagttattttaaatttaagttt 282
Query: 301 gagttttttcattgtatggacagagacaaatggaagc-aggaataatgaggtttcctgtg 359
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 281 gagttttttcattgtatggacagagacaaatggaagcaaggaataatgaggtttcctgtg 222
Query: 360 gttaggaatgacatttgggct 380
|||||||||||||||||||||
Sbjct: 221 gttaggaatgacatttgggct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 380
Length of database: 781
Length adjustment: 9
Effective length of query: 371
Effective length of database: 772
Effective search space: 286412
Effective search space used: 286412
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
