Query= MSMg01no477_b05.b1 MSMg01no477_b05.b1 CHROMAT_FILE:
MSMg01no477_b05.b1 PHD_FILE: MSMg01no477_b05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:56:24 2005
(643 letters)
>mm_chr9_56130303_56131345
Length = 1043
Score = 1193 bits (617), Expect = 0.0
Identities = 633/639 (99%), Gaps = 2/639 (0%)
Strand = Plus / Plus
Query: 5 gaattcaaagtttgattgtctggagacaatatacctatattagtatcaaatgtctaacat 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaaagtttgattgtctggagacaatatacctatattagtatcaaatgtctaacat 264
Query: 65 tgtcaaatgtctaacattatcaaatgtctaatattgtctggaggcgatatacctatatta 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tgtcaaatgtctaacattatcaaatgtctaatattgtctggaggcgatatacctatatta 324
Query: 125 gtatcaaatgtctaacactgataaaaatgttgcagaattatgatctgctagtttcttttt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gtatcaaatgtctaacactgataaaaatgttgcagaattatgatctgctagtttcttttt 384
Query: 185 tttaattaggtgtttatttcatttacatttccaatgctctcccaaaagtccccaacatgc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 385 tttaattaggtgtttatttcatttacatttccaatgctctcccaaaagtcccccacatgc 444
Query: 245 tccccccccccactcccacttcttggccctggcgttcccctgtactgagacagataaagt 304
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tccccccccc--ctcccacttcttggccctggcgttcccctgtactgagacagataaagt 502
Query: 305 ttgcacgaccaatgggcctctctttccactgatggccgactaggccatcttctgatacat 364
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 503 ttgcacgaccaatgggcctctctttccactgatggccaactaggccatcttctgatacat 562
Query: 365 atgcagctagagacacgagctccgtggggtactgggtagttcatattgttgttccgccta 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 atgcagctagagacacgagctccgtggggtactgggtagttcatattgttgttccgccta 622
Query: 425 tagggttgcagatccctttagctccttggttactttctctagctcctccattgtgggccc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 623 tagggttgcagatccctttagctccttggttactttctctagctcctccattgggggccc 682
Query: 485 tgtgatccatccaatagctgactgtgagcatccacttctgtgtttgctaggccccggcat 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 tgtgatccatccaatagctgactgtgagcatccacttctgtgtttgctaggccccggcat 742
Query: 545 agtctcacatgagacagctctatctgggtcctttcagcaaaatcttgctagtgtatgcaa 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 agtctcacatgagacagctctatctgggtcctttcagcaaaatcttgctagtgtatgcaa 802
Query: 605 tgttgtcagcgtttggaagctgattatgggatggatccc 643
|| ||||||||||||||||||||||||||||||||||||
Sbjct: 803 tggtgtcagcgtttggaagctgattatgggatggatccc 841
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 643
Length of database: 1043
Length adjustment: 10
Effective length of query: 633
Effective length of database: 1033
Effective search space: 653889
Effective search space used: 653889
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no477_b05.g1 MSMg01no477_b05.g1 CHROMAT_FILE:
MSMg01no477_b05.g1 PHD_FILE: MSMg01no477_b05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:56:24 2005
(642 letters)
>mm_chr9_56342121_56343162
Length = 1042
Score = 1207 bits (624), Expect = 0.0
Identities = 637/642 (99%)
Strand = Plus / Minus
Query: 1 tccttcaaagtcccgctgagccacaaaacccagaggtcagaaaatggagatgtgtgactt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717 tccttcaaagtcccgctgagccacaaaacccagaggtcagaaaatggagatgtgtgactt 658
Query: 61 ggtgggagtgaagaaaagcagtcccccagaggcatttaaaaaagtgacatctgggtaaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 ggtgggagtgaagaaaagcagtcccccagaggcatttaaaaaagtgacatctgggtaaga 598
Query: 121 aaactggagtgggattgtaacaatgagaaatcttcctttttgctggggagagaaggagga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 aaactggagtgggattgtaacaatgagaaatcttcctttttgctggggagagaaggagga 538
Query: 181 tgtcagtctcggggtcgctgttgtcagaagaatgtatgcagctccactttagcagaaatg 240
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 537 tgtcagtctcggggtcgctgttgtcagaagaatgtatgcagctccacttcagcagaaatg 478
Query: 241 gaaatgagaggactccaggaagactttgaagagagtgaggggctggacacttccagaact 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 477 gaaatgagaggactccaggaagactttgaagagagtgaggggctggacacttccagagct 418
Query: 301 gcacacagggcatttctacagagttcacgcatccatctttgttgctccctcacacagctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 gcacacagggcatttctacagagttcacgcatccatctttgttgctccctcacacagctt 358
Query: 361 cctgggatgaaagcacttcacttactgacaattctttcacagggagggatctgtcctctg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 cctgggatgaaagcacttcacttactgacaattctttcacagggagggatctgtcctctg 298
Query: 421 ccccgtctcagttcaaatgttcatgggcagcttctcattctgcacaagtgcacacactac 480
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 297 ccccgtctcagttcaaatgttcatgggaagcttctcattctgcacaagtgcacacactac 238
Query: 481 atcttggagcactaagatctgtagaatagagagagaaaaacaaacaaacaaacaaacacc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 atcttggagcactaagatctgtagaatagagagagaaaaacaaacaaacaaacaaacacc 178
Query: 541 nnaaaggtaactgccagtcagaaggagttagggttatggatttaaaaatgctttgatttt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177 aaaaaggtaactgccagtcagaaggagttagggttatggatttaaaaatgctttgatttt 118
Query: 601 tgagagggttataacaggaaaatatgaaataaagacctcata 642
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117 tgagagggttataacaggaaaatatgaaataaagacctcata 76
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 642
Length of database: 1042
Length adjustment: 10
Effective length of query: 632
Effective length of database: 1032
Effective search space: 652224
Effective search space used: 652224
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
