GGCGGCGCGAAANNGANNCCAATTTCTTACCCGCGCGNGGAANNCNGNGC
TTACTGTTATCTGGCGNNAGNGNNNACNCCANNCANACNGAAGGCAGAAC
ANGCATGNCACCCCGAAAAGNNANNCNANNNAGCGCNNANAANNNAAAAN
AAATTNNAAAAGCCNNGNGCANGNGANGCANGNANGNGNNNGCANGCNNG
AGNGNGNGNGCGCGAGNANGNGAGCCNGCANGCGCATGTTTTAACAAGGC
CATCATGTATATATAGGGGTCAGAAGACATTCTCAATGTTGGTCCTGGCC
TTCTGTTTTTTTTAAANANGANNNNNCANNGNNNGCACCNGAANATTGCA
GGCTACACGGCCTGCAGCTTCTAAGGATTCTCTTGTCTCTGCCTTTCATC
TAACTGCAGTGTTCTGGGATTATAAGTTCACACTTATTACTGGGCAGAGC
TTTTACATGGGCTTTTGCTCATTTAAGCTCAGATCCTCACTCTTAAGCTG
CAAATGTTCTACTACTGAGCCATCTCTCTAGCCCTTGAAATAATCCTGAG
TCTATATATATAAAACACTTGCATTCAAGAGTTAGACATTTATCAGGAAG
AGTCGCTTTGCTAGTAAATGTTTTAGGTGAAGATGTCATTCTTTTTGACA
CACCTCAAAAGAACACTTGTGTTGGAGACAGGTAACTAACAGCCACTGCC
AACTAAAGTTCATGCCAAATCCTTTAATGGA

GGGAGGCCTGGAGGCCGCCTTTTTCAAATAGGGAGGNNGAANNANANAAG
TACAAGAAAAAGTGCTGAATGGTCTCCTTTGACTCCACAGTACATTGTGC
ATACCCACACCATCTCCCATAATAATACAAATATGTATATTTATGATTTA
AAGAAAAATCACAGGATAATAACACTAGATAAAGAAAAGCTAATAACAAT
AAAGGCCAAATTACTGAAGAAAATATGTCTTAGGGGTTTTATTTTATTTT
ATTTTATTTTTGCCTGAATTAGATTCAATTTCCTCAGAGAAGCATTCAAC
TGTTTGTGTTTTCTGCATTGTACGTCTAGTATACAGACAATTAAGAGTAG
AAAAGCTGACACTGTATTTTGATTCAAAGAAATTTCTTAGGAGCAATTCT
TAGTCCAATTTATATACACATTTCACTTTATCTGAAAATTCTGGAGATTG
AATTTAGAAGAATCTAGGCCTGTTGATAGAAACCCAGTATCCCATACACC
TAGAAGACTCAGACAAGCAAATGTGAGGTTCATGCTCTCCACTGAGTTAC
ATCACCAATTCTAATCAAGGCAATTCATCAGTACAACAAGTCACCCATCA
TACAAACAAAAAGTCATCTATCATTTATCTCTCTATTCATCTATCTATCT
ACCTATTCTCCTATCATTTATCTACATGTCTATCCATCTGTCCATGCATC
CATTCATCCACCCATCTATCTATCTGTCTATCTTCN

Query= MSMg01no478_k11.g1 MSMg01no478_k11.g1 CHROMAT_FILE:
MSMg01no478_k11.g1 PHD_FILE: MSMg01no478_k11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:58:25 2005
         (662 letters)



>mm_chr9_9009792_9010853
          Length = 1062

 Score = 1189 bits (615), Expect = 0.0
 Identities = 651/663 (98%), Gaps = 2/663 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgaatggtctcctttgactccacagtacattgtgcatacccacaccatctcccataataa 60
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 201 tgaatggtctcctttgactccacagtacattgtgcatgcccacaccatctcccataataa 260

                                                                       
Query: 61  tacaaatatgtatatttatgatttaaagaaaaatcacaggataataacactagataaaga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tacaaatatgtatatttatgatttaaagaaaaatcacaggataataacactagataaaga 320

                                                                       
Query: 121 aaagctaataacaataaaggccaaattactgaagaaaatatgtcttaggggttttatttt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 321 aaagctaataacaataaaggccaaattactgaagaaaatatgtcttaggggttttatttg 380

                                                                       
Query: 181 attttattttatttttgcctgaattagattcaatttcctcagagaagcattcaactgttt 240
            |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 381 gttttattttatttttgcctgaattagattcaatttcttcagagaagcattcaactgttt 440

                                                                       
Query: 241 gtgt-tttctgcattgtacgtctagtatacagacaattaagagtagaaaagctgacactg 299
           | || |||||||||||||| ||||||||||||||||||||||||||| ||||||||||||
Sbjct: 441 g-gtatttctgcattgtacttctagtatacagacaattaagagtagataagctgacactg 499

                                                                       
Query: 300 tattttgattcaaagaaatttcttaggagcaattcttagtccaatttatatacacatttc 359
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 500 tattttgattcaaagaaatttcttaggaccaattcttagtccaatttatatacacatttc 559

                                                                       
Query: 360 actttatctgaaaattctggagattgaatttagaagaatctaggcctgttgatagaaacc 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 actttatctgaaaattctggagattgaatttagaagaatctaggcctgttgatagaaacc 619

                                                                       
Query: 420 cagtatcccatacacctagaagactcagacaagcaaatgtgaggttcatgctctccactg 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 cagtatcccatacacctagaagactcagacaagcaaatgtgaggttcatgctctccactg 679

                                                                       
Query: 480 agttacatcaccaattctaatcaaggcaattcatcagtacaacaagtcacccatcataca 539
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 680 agttacatcaccaattctaatcaagacaattcatcagtacaacaagtcacccatcataca 739

                                                                       
Query: 540 aacaaaaagtcatctatcatttatctctctattcatctatctatctacctattctcctat 599
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 aacaaaaagtcatctaccatttatctctctattcatctatctatctacctattctcctat 799

                                                                       
Query: 600 catttatctacatgtctatccatctgtccatgcatccattcatccacccatctatctatc 659
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 800 catttatctacatgtctatccatctgtccatgcatccattcatccacccatctatccatc 859

              
Query: 660 tgt 662
           |||
Sbjct: 860 tgt 862


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 40
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 662
Length of database: 1062
Length adjustment: 10
Effective length of query: 652
Effective length of database: 1052
Effective search space:   685904
Effective search space used:   685904
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)