Query= MSMg01no479_h03.b1 MSMg01no479_h03.b1 CHROMAT_FILE:
MSMg01no479_h03.b1 PHD_FILE: MSMg01no479_h03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:59:26 2005
(594 letters)
>mm_chr9_42298627_42299621
Length = 995
Score = 1081 bits (559), Expect = 0.0
Identities = 586/595 (98%), Gaps = 1/595 (0%)
Strand = Plus / Plus
Query: 1 agccaccctgcattcacagcaaacatttagctcagaaaaattgcatcaccgtaaacattg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agccaccctgcattcacagcaaacatttagctcagaaaaattgcatcaccgtaaacattg 260
Query: 61 cttccaagccaggagtgcgtcataggtaagcctgccatgccattaagatgaaatattgca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cttccaagccaggagtgcgtcataggtaagcctgccatgccattaagatgaaatattgca 320
Query: 121 cacagctagccatctgtcttggcacgtttagctgttcatctacctcaggaggtttcactg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cacagctagccatctgtcttggcacgtttagctgttcatctacctcaggaggtttcactg 380
Query: 181 aactctgtgaatatgtcactttaaaagatggtaccaattttaaaataacaccgagaacaa 240
|||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||
Sbjct: 381 aactctgtgaatatgtcactttaaaagatggtaccaatttaaaaataacatcgagaacaa 440
Query: 241 ttaaagatattgtatacgctgttcacttaaagggtccagacaaccactgagagctaagaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttaaagatattgtatacgctgttcacttaaagggtccagacaaccactgagagctaagaa 500
Query: 301 gacaatcctctctgatataaaacggcccagttatgcgttatttcaccacctacttgtagg 360
||||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||
Sbjct: 501 gacaatcctctctgatataaaacggcccagttatgtgttatttcactacttacttgtagg 560
Query: 361 gattttataggtatttttcattttccacgcactcccatctggctcccttaaacttggctc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gattttataggtatttttcattttccacgcactcccatctggctcccttaaacttggctc 620
Query: 421 tcttcatggttataaatgaagtaaataaggcaaactattgggagaaaggcaaactaaagg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tcttcatggttataaatgaagtaaataaggcaaactattgggagaaaggcaaactaaagg 680
Query: 481 gagaaaaaaa-tgaggcaaagagaggccagatggggtctcgtgggagcaaagagtactag 539
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gagaaaaaaaatgaggcaaagagaggccagatggggtctcgtgggagcaaagagtactag 740
Query: 540 tctgcccattcacatgtagagtagagagaatggacgtcacctccgtgacggcaga 594
||||| |||||||||| ||||||||||||||||||||||||||||||| ||||||
Sbjct: 741 tctgcacattcacatgcagagtagagagaatggacgtcacctccgtgatggcaga 795
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 594
Length of database: 995
Length adjustment: 10
Effective length of query: 584
Effective length of database: 985
Effective search space: 575240
Effective search space used: 575240
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no479_h03.g1 MSMg01no479_h03.g1 CHROMAT_FILE:
MSMg01no479_h03.g1 PHD_FILE: MSMg01no479_h03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:59:27 2005
(572 letters)
>mm_chr9_42494477_42495448
Length = 972
Score = 1060 bits (548), Expect = 0.0
Identities = 566/572 (98%)
Strand = Plus / Minus
Query: 1 cctgtggattgtagggttttacagacacagtagggccctcaactttcatagcacacaggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 772 cctgtggattgtagggttttacagacacagtagggccctcaactttcatagcacacaggg 713
Query: 61 tgggttccttgtgatgggtgcctcttttacatctaacaatactatgagaattacatgctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 tgggttccttgtgatgggtgcctcttttacatctaacaatactatgagaattacatgctg 653
Query: 121 cttcctctattttaggaagaacagtgatgctcaaagttgtgggataatcagcctgagccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 cttcctctattttaggaagaacagtgatgctcaaagttgtgggataatcagcctgagccc 593
Query: 181 agagctagtctgcgcaatctgctgcatctcccttcggtcctctgcctggtgctggtattg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 agagctagtctgcgcaatctgctgcatctcccttcggtcctctgcctggtgctggtattg 533
Query: 241 ccttgtgttttagcctcagctactgagcctctgccttgcagctaagccagaagtgaacaa 300
||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 ccttgtgacttaacctcagctactgagcctctgccttgcagctaagccagaagtgaacaa 473
Query: 301 cagctctgttacagaagggaagcagagagctatcagtcacctctctgcttctctgtccaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 cagctctgttacagaagggaagcagagagctatcagtcacctctctgcttctctgtccaa 413
Query: 361 gtgccagagacagcagcttaaagggagaaaaggcttgcttggctgcacagtctttgaggt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 gtgccagagacagcagcttaaagggagaaaaggcttgcttggctgcacagtctttgaggt 353
Query: 421 ccgtgactgagcaccatggagaggcttgtgttagagtaaagttgcctactgcgtggtacc 480
||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||
Sbjct: 352 ccgtgactgagcaccatggagaggcttttgttagagtaaagttgcccactgcgtggtacc 293
Query: 481 caggaagcaagaggagatgggaagagagggaacaaggaggctcccaatatccctgtaagg 540
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 292 caggaagcaagaggagatgggaagagggggaacaaggaggctcccaatatccctgtaagg 233
Query: 541 acacgccccagtgacctcactcccttccactt 572
||||||||||||||||||||||||||||||||
Sbjct: 232 acacgccccagtgacctcactcccttccactt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 572
Length of database: 972
Length adjustment: 10
Effective length of query: 562
Effective length of database: 962
Effective search space: 540644
Effective search space used: 540644
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
