Query= MSMg01no480_a07.b1 MSMg01no480_a07.b1 CHROMAT_FILE:
MSMg01no480_a07.b1 PHD_FILE: MSMg01no480_a07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:00:12 2005
(133 letters)
>mm_chr9_11124574_11125116
Length = 543
Score = 195 bits (101), Expect = 7e-55
Identities = 129/139 (92%), Gaps = 10/139 (7%)
Strand = Plus / Plus
Query: 2 ttttctgacattatatttc-cctcatatatgcacaaagagagacatataaaaacacaaa- 59
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 202 ttttctgacattatatttcacctcatatatgcacaaagagagacatataaaaacacaaag 261
Query: 60 ttataa-taa-aaaacttaatatctaaaa-ttatgttcaat--aatgat-gtatgattta 113
|||||| ||| |||||||||||||||||| ||||||||||| |||||| ||||||||||
Sbjct: 262 ttataagtaataaaacttaatatctaaaaattatgttcaattaaatgattgtatgattta 321
Query: 114 -aca-tccttttaaagtag 130
||| ||||||||||||||
Sbjct: 322 tacaatccttttaaagtag 340
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 133
Length of database: 543
Length adjustment: 8
Effective length of query: 125
Effective length of database: 535
Effective search space: 66875
Effective search space used: 66875
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no480_a07.g1 MSMg01no480_a07.g1 CHROMAT_FILE:
MSMg01no480_a07.g1 PHD_FILE: MSMg01no480_a07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:00:12 2005
(576 letters)
>mm_chr9_11270739_11271713
Length = 975
Score = 1013 bits (524), Expect = 0.0
Identities = 563/576 (97%), Gaps = 1/576 (0%)
Strand = Plus / Minus
Query: 1 acacatcgaagaagcaatttctataaaagtgaaatataaattacaggttaagtcctcaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 acacatcgaagaagcaatttctataaaagtgaaatataaattacaggttaagtcctcaaa 716
Query: 61 tggtctatattaaatggtgctttgccatgtctcaaataaaatttagataattttaaattg 120
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 715 tggtctatattaaatggtgctttgccatgtctccaataaaatttagataattttaaattg 656
Query: 121 tcaaaagtttaacatttaaggaaaagagcaccaagtttttagattgaatgcaacaatgtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 tcaaaagtttaacatttaaggaaaagagcaccaagtttttagattgaatgcaacaatgtg 596
Query: 181 gtcatagttatcagttagtattacttttctctacatccagtgtatttgggttcaaggagg 240
||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 595 gtcatagttatcagtcagtattacttttctctacatccagtgtatttgggttcaaagagg 536
Query: 241 aaaatgtttgtgtaaattaactgaaaatgaatatgaagaaaatctacgggtatttataat 300
|||| | |||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 535 aaaaagaaagtgtaaattaactgaaaatgaatatgaagaaaatctac-ggtatttataat 477
Query: 301 ttattcaggaaatgcaaaaatgtgagattaaaatttatcagaatgtcttggaattgaaat 360
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 476 ttattcaggaaatgcaaaaatgtgagattaaaatttatcagaacgtcttggaattgaaat 417
Query: 361 aatttgttcctaatcacacatttgcagagcactaaaagtaaaataatcattagataaaaa 420
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 416 gatttgttcctaatcacacatttgcagagtactaaaagtaaaataatcattagataaaaa 357
Query: 421 tagtcaacaattgtgccatacggctgtacctatgaatatagtattaaaatgtttagcaaa 480
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||
Sbjct: 356 tagtcaacaattgtgccatatggctgtacctatgaatatagtattaaaatgtttagcgaa 297
Query: 481 gaaatccaagagggattacatcaatggttcttacagtcaattataagaagggaaactcta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 gaaatccaagagggattacatcaatggttcttacagtcaattataagaagggaaactcta 237
Query: 541 gagatctgtgcttcgaatttatcactatcatttaaa 576
||||||||||||||||||||||||||||||||||||
Sbjct: 236 gagatctgtgcttcgaatttatcactatcatttaaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 576
Length of database: 975
Length adjustment: 10
Effective length of query: 566
Effective length of database: 965
Effective search space: 546190
Effective search space used: 546190
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
