Query= MSMg01no480_l20.b1 MSMg01no480_l20.b1 CHROMAT_FILE:
MSMg01no480_l20.b1 PHD_FILE: MSMg01no480_l20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:01:08 2005
(652 letters)
>mm_chr9_75865591_75866640
Length = 1050
Score = 1218 bits (630), Expect = 0.0
Identities = 646/652 (99%), Gaps = 2/652 (0%)
Strand = Plus / Plus
Query: 1 ataaacagaactacgaacccccagtagtccttcattcatctcattttaaactattcactt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ataaacagaactacgaacccccagtagtccttcattcatctcattttaaactattcactt 260
Query: 61 ttattcttgccctttttccccccacagaggccctctttgagatctctacaaaccatgttc 120
||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 261 ttattcttgcccttttttcccccacagaggccctctttgaggtctctacaaaccatgttc 320
Query: 121 cctctgattttctcatccatcttagaggatatttctccattaattagtttttattccatc 180
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 321 cctctgattttctcatccatcttagaggatatttctccattaattagcttttattccatc 380
Query: 181 ttcagtgttcaatttgaatgtcactttctcaccaactccttctgagattaccgtacagtg 240
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 381 ttcagtgttcaatttgaatgtcactttctcaccaactccttctgagattaccatacagtg 440
Query: 241 aactactgtatgtaatatggattatctatttatttgatgcttatttggcatataactctc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aactactgtatgtaatatggattatctatttatttgatgcttatttggcatataactctc 500
Query: 301 agtcatatgttaaccccaacaagaccaggaaacaacccatcagtggatttacctcactca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agtcatatgttaaccccaacaagaccaggaaacaacccatcagtggatttacctcactca 560
Query: 361 acaaaaatgcctgattagttctgatgttttgtatgtacttgctaaacaaataaatgactg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 acaaaaatgcctgattagttctgatgttttgtatgtacttgctaaacaaataaatgactg 620
Query: 421 ctcacctttgcagaggacaagccaagcatcacatagttggaaaacagtcttaaaacagcg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ctcacctttgcagaggacaagccaagcatcacatagttggaaaacagtcttaaaacagcg 680
Query: 481 attagcacattatagtatataatacatagtttctgagaatgagtgccttagtaccagcat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 attagcacattatagtatataatacatagtttctgagaatgagtgccttagtaccagcat 740
Query: 541 ccactggctgttgttactgtttgggaatcatctttttattacatggtcccaggcagggtt 600
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 741 ccactggctgttgttactgtt--ggaatcatctttttattacatggtcccaggcagggtt 798
Query: 601 tgctggtcaaggaaacatgcaaacgaaatttgaatgctgtaaataaaccaca 652
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 tgctggtcaaggaaacatgcaaacgaaatttgaatgctgtaaataaaccaca 850
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 652
Length of database: 1050
Length adjustment: 10
Effective length of query: 642
Effective length of database: 1040
Effective search space: 667680
Effective search space used: 667680
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no480_l20.g1 MSMg01no480_l20.g1 CHROMAT_FILE:
MSMg01no480_l20.g1 PHD_FILE: MSMg01no480_l20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:01:08 2005
(356 letters)
>mm_chr9_76039520_76040275
Length = 756
Score = 543 bits (281), Expect = e-159
Identities = 338/357 (94%), Gaps = 2/357 (0%)
Strand = Plus / Minus
Query: 1 ttattagcttttagaaataagatgtaaatatatttttaaagttaatctttaggaaaagga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 556 ttattagcttttagaaataagatgtaaatatatttttaaagttaatctttaggaaaaaga 497
Query: 61 aaactgaaattcaggcaatgggcttggttggggatgaattcattgaccttactgt-tgtg 119
|||||||||||||||||||||| |||||||||||||| | || |||| | ||||| | ||
Sbjct: 496 aaactgaaattcaggcaatgggtttggttggggatgactacagtgacatcactgtct-tg 438
Query: 120 agattctccaacagttttgtataaacagctcataggacatactagaggaggttggagctc 179
||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||
Sbjct: 437 agattctccaacagttttgtataaacagctcataggacacactagaagaggttggagctc 378
Query: 180 atgtgtgtttctgtctgctgctattcccctgtcaccagtgataggtagttttccagagcc 239
|||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 377 atgtatgtttctgtctgctgctattcccctgttgccagtgataggtagttttccagagcc 318
Query: 240 agctgtctctacccgttgcccttagccttgcatctgttcagccctaaggagttgcttgtg 299
|||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||
Sbjct: 317 agctgtctctacccgtcacccttagccttgtatctgttcagccctaaggagttgcttgtg 258
Query: 300 tcttgtttcagctcctttctcttttattcactttgtcatgactctgctatctgagca 356
||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||
Sbjct: 257 tcttgtttcagctcctttcccttttatgcactttgtcatgactctgctatctgagca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 356
Length of database: 756
Length adjustment: 9
Effective length of query: 347
Effective length of database: 747
Effective search space: 259209
Effective search space used: 259209
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
