Query= MSMg01no481_h20.b1 MSMg01no481_h20.b1 CHROMAT_FILE:
MSMg01no481_h20.b1 PHD_FILE: MSMg01no481_h20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:02:08 2005
(696 letters)
>mm_chr9_94760713_94761807
Length = 1095
Score = 1268 bits (656), Expect = 0.0
Identities = 668/672 (99%), Gaps = 1/672 (0%)
Strand = Plus / Plus
Query: 22 tttacctttctaaagttgttaaatagactttgaaaggaggcagaagacagagcaaagaga 81
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 tttacctttctaaagttgttaaatagactttgaaaggaggcagaagacagagcaaagaga 281
Query: 82 tctggagaaggtatacgtgcttgaatcctgaacaaagacattaatttcagaggcagcatg 141
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 tctggagaaggtatacgtgcttgaatcctgaacaaagacattaatttcagaggcagcatg 341
Query: 142 gcagaagctacaattagaagtcagatctgatgtcaggatcccccaataattaactgtgca 201
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 gcagaagctacaattagaagtcagatctgatgtcaggatcccccaataattaactgtgca 401
Query: 202 atcagtacagttttcccagaaccaaccaaactgctgtaagcaaacagactgtgagctgat 261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 atcagtacagttttcccagaaccaaccaaactgctgtaagcaaacagactgtgagctgat 461
Query: 262 gtaagtgagcagcagccataggaatagctcagtaaagggccccaccaaatgagcaggtct 321
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 gtaagtgagcagcagccataggaatagctcagtaaagggccccaccaaatgagcaggtct 521
Query: 322 ctccctcctcacccagctccttcatgaggcactgctccagtcttctgaacagagcaagaa 381
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 ctccctcctcacccagctccttcatgaggcactgctccagtcttctgaacagagcaagaa 581
Query: 382 cccacggtccattagcccatcatccccagccttgttttgctacagcttatagattctgga 441
||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| ||
Sbjct: 582 cccacggtccattagcccatcatccccggccttgttt-gctacagcttatagattctcga 640
Query: 442 actgtgactactttaggtatgcttactgaggcaagggagacactgtcttacccatgtaag 501
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 actgtgactactttaggtatgcttactgaggcaagggagacactgtcttacccatgtaag 700
Query: 502 ccacgtgtaacatcagagtcataagtggcctcacttggaatcacaaagctgagataagaa 561
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 ccacgtgtaacatcagagtcataagtggcctcacttggaatcacaaagctgagataagaa 760
Query: 562 aagcagaattattgtccaagtaaaatcgccatgaaactaaatgctagatagaaacgtaac 621
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 761 aagcagaattattgtccaagtaaaatcgccatgaaactaaatgctagatagaaatgtaac 820
Query: 622 aaaacttagcacaccagaagagcggtattggttttcctgcctacaaagtgtaaaagtcgt 681
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 821 aaaacttagcacaccagaagagcggtattggttttcctgcctacaaagtgtaaaagtcgt 880
Query: 682 tatttagtatac 693
||||||||||||
Sbjct: 881 tatttagtatac 892
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 696
Length of database: 1095
Length adjustment: 10
Effective length of query: 686
Effective length of database: 1085
Effective search space: 744310
Effective search space used: 744310
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no481_h20.g1 MSMg01no481_h20.g1 CHROMAT_FILE:
MSMg01no481_h20.g1 PHD_FILE: MSMg01no481_h20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:02:09 2005
(627 letters)
>mm_chr9_94956581_94957607
Length = 1027
Score = 1120 bits (579), Expect = 0.0
Identities = 609/619 (98%)
Strand = Plus / Minus
Query: 1 tcttcctctaagctctgccttctaagcctcatttttccatgcagggatccaacctactga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 819 tcttcctctaagctctgccttctaagcctcatttttccatgcagggatccaacctactga 760
Query: 61 attttatttttcagaaacctgaacacagcactgtcttactaacgattcgcgggggatcca 120
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 759 attttattttccagaaacctgaacacagcactgtcttactaacgattcgcgggggatcca 700
Query: 121 actcttgagagtttaatgcggcatgtgtgcccatccataggaaccctccaggaaccacca 180
||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||
Sbjct: 699 actcttgagagtttaatgcagcatgtgtgcccatcaataggaaccctccaggaaccacca 640
Query: 181 ctgtgaaagaaattgcagaccacgtttatgtggctagaaaataattcaacaagcatttca 240
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 ctgtgagagaaattgcagaccacgtttatgtggctagaaaataattcaacaagcatttca 580
Query: 241 aaatgctcactgctcacctttagtcaaagcacttttgtgtgttcagtaatacccatagta 300
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 aagtgctcactgctcacctttagtcaaagcacttttgtgtgttcagtaatacccatagta 520
Query: 301 gtccataagctcttctaccctgaaatttggtttaatacacagctacttggcctactttac 360
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 519 gtccataagctcttctaccccgaaatttggtttaatacacagctacttggcctactttac 460
Query: 361 acataagcctacttatactaaatatgtgaggcctgcttctgcgttttctttgccaaatgg 420
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 459 acataagcctacttatactaaatatgtgaggcctgcttctgctttttctttgccaaatgg 400
Query: 421 gtagaaaattcttgaaaatgcttaacaaaagcatttgtatttatagttatagtcacttaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 gtagaaaattcttgaaaatgcttaacaaaagcatttgtatttatagttatagtcacttaa 340
Query: 481 gttttcatgaataatgtattcattcttgttataatggacatgtcatgcaaaggtactgaa 540
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 gttttcatgaataatttattcattcttgttataatggacatgtcatgcaaaggtactgaa 280
Query: 541 atcatagtccttgttaataagcatccttttggaaaccctgtgtcgttagaaggatctttt 600
||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||
Sbjct: 279 atcatagtccttgttaataagcatccttttggaaaccctgtatagttagaaggatctttt 220
Query: 601 cctattgggcatgagtttg 619
|||||||||||||||||||
Sbjct: 219 cctattgggcatgagtttg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 627
Length of database: 1027
Length adjustment: 10
Effective length of query: 617
Effective length of database: 1017
Effective search space: 627489
Effective search space used: 627489
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
