XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTCT
GTTTACCTCTATACCCCATTTTTTGATTGGGTTGTTTGGGGTTTTGGTGG
TTAGGTTTTTGAGTTCTTTATATATTTTGGATATTAGTCCTCTATCGGAT
GTGGGATTAGTAAAGATTTTTTTTCCCAATCTGTAGGTTGCCGATTTGTC
TTATTGACTATATCCTTTGCCTTACAGAAGCTTTTCTGTTTCATAAGGTC
TCATTTATCAATTCTTGATCTTACAGCGTGAGCCACTGGAGTTCTGTTTA
GGAAATTTCTTTTTTGTACCAATAAGTTCAAGGCTCTTTCCCACCTTTTC
TTCTATTAGATTCAGTATATCTGGTTTTATGTTGAGGTTCTTGATCCACT
TGGACTTGAGCTTTGTGCAAGGTGACAAATATGGGCCTATTTTCTATTTT
TCTACACACAGACAGCCTTCAATAAAAAAAAAACCCAGAAAGCTCACATA
CACATGGAAATTGAACAACTCTCTACTCAATGATAACTTGGTCAGGGAAA
AAATAAAGAAATAAATTAAAGACTTCCTGGAACTCAATGAAAATGTTGAC
ATAATATATCCCAACTTATGGGACACAATGAAAGCAGTACTAAGAGGAAA
ATTCATAGTATTAAGAGCTCTGGTAAAGAAACTGGAGAGATATTATACTA
GCAACTTAACAGCACTCCTGAGAGCTCTAGAACAAN

GGCGGCCGCCTGGCCCCAAAAATGGGGTGAACTATAGAAGGTTTTCCGGA
ATTCAGAGGAACGCAATGAGGATGATGTATGAATCTAACTAAGAACAACT
CTTGCGGGAAGGTCAAAAGTACTGGAGAAGGAAGGTGAGGGAACATTTAA
TAACTGTTTTTAAAATACTAAATTTTTACATGTAAGAGATTAAATGTGTT
TAAGTCTGAAGGAGTTAGGATCGACAGAAAGAACTCCCCTTTGTGAAAGA
TAAATAGGCTACAAAAAATTAGAGAACCTGCTCCACAGAATTTGAAAAAT
GAAGTTATTTTCATTTATTTTAGCTCATCGTTCTTTGTGAAGGTCAGGGA
AGGGGCCACACAGCATTTCATTCTCCCTCGGCTCTGAGATTCTTGGACCA
CCCTTTTCCGTGAATCAGTGATGGATCCCTCCATAGTTAAGTGCCCTTGT
GCCCTGAGAGCTTGAGGTGATGTTCCAAGCTGAAATTCCTTTCTGTTAGA
TTGAGGTTAGTCTTGGGTTTAATAAGTCTTCTTTTTAATAAGACAGTGAT
GTGACCCTAGACTACTGCATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT
CTCTCTATGTGTGTGTGTGTGTGTGTGTTTGTGCGTGTATGTGTGTATGT
GTGTATGTGTGTGNGAATGAGNGNGTATATTTGAAT

Query= MSMg01no482_b05.g1 MSMg01no482_b05.g1 CHROMAT_FILE:
MSMg01no482_b05.g1 PHD_FILE: MSMg01no482_b05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:02:54 2005
         (605 letters)



>mm_chr9_85902842_85903846
          Length = 1005

 Score = 1023 bits (529), Expect = 0.0
 Identities = 593/629 (94%), Gaps = 24/629 (3%)
 Strand = Plus / Minus

                                                                       
Query: 1   cagaggaacgcaatgaggatgatgtatgaatctaactaagaacaactcttgcgggaaggt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 716 cagaggaacgcaatgaggatgatgtatgaatctaactaagaacaactcttgcgggaaggt 657

                                                                       
Query: 61  caaaagtactggagaaggaaggtgagggaacatttaataactgtttttaaaatactaaat 120
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 656 caaaagtactggagaaggaaggtgaaggaacatttaataactgtttttaaaatactaaat 597

                                                                       
Query: 121 ttttacatgtaagagattaaatgtgtttaagtctgaaggagttaggatcgacagaaagaa 180
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 596 ttttacatgtaagagattaaatgtgtttaagtctggaggagttaggatcgacagaaagaa 537

                                                                       
Query: 181 ctcccctttgtgaaagataaataggctacaaaaaattagagaacctgctccacagaattt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 ctcccctttgtgaaagataaataggctacaaaaaattagagaacctgctccacagaattt 477

                                                                       
Query: 241 gaaaaatgaagttattttcatttattttagctcatcgttctttgtgaaggtcagggaagg 300
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 gaacaatgaagttattttcatttattttagctcatcgttctttgtgaaggtcagggaagg 417

                                                                       
Query: 301 ggccacacagcatttcattctccctcggctctgagattcttggaccacccttttccgtga 360
           ||||||||||||||||||||||||||||||||||||||||||||  | | ||||||| ||
Sbjct: 416 ggccacacagcatttcattctccctcggctctgagattcttggattagctttttccggga 357

                                                                       
Query: 361 atcagtgatggatccctccatagttaagtgcccttgtgccctgagagcttgaggtgatgt 420
           |||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 356 atcagtgatggatccccccatagttaagtgcccttgtgccctgagggcttgaggtgatgt 297

                                                                       
Query: 421 tccaagctgaaattcctttctgttagattgaggttagtcttgggtttaataagtcttctt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 tccaagctgaaattcctttctgttagattgaggttagtcttgggtttaataagtcttctt 237

                                                                       
Query: 481 tttaataagacagtgatgtgaccctagactactgcatctctctctctctctctctctctc 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 236 tttaataagacagtgatgtgaccctagactactgcatctctctctctctctctctctctc 177

                                                                       
Query: 541 tctctctctctc----------------------tatgtgtgtgtgtgtgtgtgtgtttg 578
           ||||||||||||                      | ||||||||||||||||||||||||
Sbjct: 176 tctctctctctctctctctctctctctctctgtgtgtgtgtgtgtgtgtgtgtgtgtttg 117

                                        
Query: 579 tgcgtgta--tgtgtgtatgtgtgtatgt 605
           || |||||  |||||||||||||||||||
Sbjct: 116 tgtgtgtatgtgtgtgtatgtgtgtatgt 88


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 80
Number of extensions: 19
Number of successful extensions: 19
Number of sequences better than 10.0: 1
Number of HSP's gapped: 10
Number of HSP's successfully gapped: 1
Length of query: 605
Length of database: 1005
Length adjustment: 10
Effective length of query: 595
Effective length of database: 995
Effective search space:   592025
Effective search space used:   592025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)