Query= MSMg01no485_k10.b1 MSMg01no485_k10.b1 CHROMAT_FILE:
MSMg01no485_k10.b1 PHD_FILE: MSMg01no485_k10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:07:40 2005
(232 letters)
>mm_chr9_70090708_70091338
Length = 631
Score = 381 bits (197), Expect = e-110
Identities = 206/209 (98%), Gaps = 1/209 (0%)
Strand = Plus / Plus
Query: 1 aagtaaataaatgcaaatatttatataatgctcattctgtgtcagcacagaagggggata 60
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 201 aagtaaataaatgcaaatatttatataatgcttattctgtgtcagcacagaagggggata 260
Query: 61 tttaagactaggtttctcttttttagaattttgtaaaatgtctttttaaaaacaagtgta 120
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttaagactaggtttct-ttttttagaattttgtaaaatgtctttttaaaaacaagtgta 319
Query: 121 tggtctggaggtgtagctcagggggagagaatgttctgtcctgggttctgtccctggccc 180
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tggtctggaggtgtagctcagtgggagagaatgttctgtcctgggttctgtccctggccc 379
Query: 181 ctcgtcctgaagtcaatagtaagctaagc 209
|||||||||||||||||||||||||||||
Sbjct: 380 ctcgtcctgaagtcaatagtaagctaagc 408
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 232
Length of database: 631
Length adjustment: 9
Effective length of query: 223
Effective length of database: 622
Effective search space: 138706
Effective search space used: 138706
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no485_k10.g1 MSMg01no485_k10.g1 CHROMAT_FILE:
MSMg01no485_k10.g1 PHD_FILE: MSMg01no485_k10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:07:40 2005
(242 letters)
>mm_chr9_70260620_70261261
Length = 642
Score = 426 bits (220), Expect = e-124
Identities = 235/240 (97%)
Strand = Plus / Minus
Query: 3 gaggatgtctccatgaaggaagagagcctctgtctagctttctctgatgctctgctctgc 62
|||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||
Sbjct: 442 gaggatgtctccatgaaggaagagagcctctgccaagctttctctgatgctctgctctgc 383
Query: 63 aagattgaggacattgataacgaggacagggagaaccctcagctctgcagtgactacgtg 122
||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 aagatcgaggacatagataacgaggacagggagaaccctcagctctgcagtgactacgtg 323
Query: 123 aaggacatctaccagtacctcaggcagcttgaggtagctgggcctttctgtttgggatgc 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 aaggacatctaccagtacctcaggcagcttgaggtagctgggcctttctgtttgggatgc 263
Query: 183 acaagcaatgtggactttacagggatatgcggggagagatgccaacttgttaaactttta 242
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 262 acaagcaatgtggactttacagggatgtgcggggagagatgccaacttgttaaactttta 203
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 242
Length of database: 642
Length adjustment: 9
Effective length of query: 233
Effective length of database: 633
Effective search space: 147489
Effective search space used: 147489
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|