Query= MSMg01no487_i22.b1 MSMg01no487_i22.b1 CHROMAT_FILE:
MSMg01no487_i22.b1 PHD_FILE: MSMg01no487_i22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:10:12 2005
(638 letters)
>mm_chr9_60208578_60209615
Length = 1038
Score = 1189 bits (615), Expect = 0.0
Identities = 633/639 (99%), Gaps = 2/639 (0%)
Strand = Plus / Plus
Query: 1 cacacattaacatctggacagttgaaagatgacaggaataagttcctgattaaagtcata 60
|||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cacacattaacatctgtatagttgaaagatgacaggaataagttcctgattaaagtcata 260
Query: 61 gaaaacacagatagctgcatacaattatgaacagttcagggaaaaagttcgtccaacaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaaaacacagatagctgcatacaattatgaacagttcagggaaaaagttcgtccaacaga 320
Query: 121 gggaaatttcccttaccccattttactgataggaatgctaaggcctccatcctgaagcca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gggaaatttcccttaccccattttactgataggaatgctaaggcctccatcctgaagcca 380
Query: 181 acagactgaagagtggacactttaatgattatctcacatggcaccatgcaaaaggacagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acagactgaagagtggacactttaatgattatctcacatggcaccatgcaaaaggacagt 440
Query: 241 atacatggtcacaatggatcgcgataaactagaacctttgctatcaaacaactttagagt 300
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atacatggtcacaatggatcgagataaactagaacctttgctatcaaacaactttagagt 500
Query: 301 catcactcaaaatcaaattcctggaggtaataaaccaatctttaactactgaatgagcct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 catcactcaaaatcaaattcctggaggtaataaaccaatctttaactactgaatgagcct 560
Query: 361 cacttatatatgcgaatacttttgaaatggcatgcagataatctgaaaatttcctaacgc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cacttatatatgcgaatacttttgaaatggcatgcagataatctgaaaatttcctaacgc 620
Query: 421 tctgggaaggtaactcccctcaacaaattgtatcccaaaccactgcaggcactgacttcc 480
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tctgggaaggtaactcccttcaacaaattgtatcccaaaccactgcaggcactgacttcc 680
Query: 481 tataaatcaaattgaaccatatttattcaaggactttgctagggtgaatatacagtaaat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tataaatcaaattgaaccatatttattcaaggactttgctagggtgaatatacagtaaat 740
Query: 541 atttaataaatgaaaactcactgttgcaatc-tgtatagtcattcaataatttatctgtt 599
||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 741 atttaataaatgaaaactcactgttgcaatcct-tatagtcattcaataatttatctgtt 799
Query: 600 ttggaaatttggatttatagtcagactcttgacattcct 638
|||||||||||||||||||||||||||||||||||||||
Sbjct: 800 ttggaaatttggatttatagtcagactcttgacattcct 838
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 638
Length of database: 1038
Length adjustment: 10
Effective length of query: 628
Effective length of database: 1028
Effective search space: 645584
Effective search space used: 645584
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no487_i22.g1 MSMg01no487_i22.g1 CHROMAT_FILE:
MSMg01no487_i22.g1 PHD_FILE: MSMg01no487_i22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:10:12 2005
(679 letters)
>mm_chr9_60373551_60374629
Length = 1079
Score = 1226 bits (634), Expect = 0.0
Identities = 651/657 (99%)
Strand = Plus / Minus
Query: 1 aaagttgtgctgtgccaggtaaggccacttcactatctctgctgacaggatgtgagcagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 aaagttgtgctgtgccaggtaaggccacttcactatctctgctgacaggatgtgagcagg 598
Query: 61 agagaggaagagagagagagatggaaatagaacgggcagagcaagataacttgaggtgtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 agagaggaagagagagagagatggaaatagaacgggcagagcaagataacttgaggtgtg 538
Query: 121 tctgaagcctctgggacacttcatgggaatcttcaacagtccccggacagtccatctaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 tctgaagcctctgggacacttcatgggaatcttcaacagtccccggacagtccatctaaa 478
Query: 181 tatgttgaccccgtgacctcagagactgtggctgcagacaaattagtctctggactgttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 tatgttgaccccgtgacctcagagactgtggctgcagacaaattagtctctggactgttg 418
Query: 241 tgtagtcttgttacaggtcaagttgcagccagccataggaaaggacacaggctcagtgtg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 tgtagtcttgttacaggtcaagttgcagccagccataggaaaggacacaggctcagtgtg 358
Query: 301 caggttagagtccagacccctggaagaggaaggagaagaagcgagttaaggagacaagca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 caggttagagtccagacccctggaagaggaaggagaagaagcgagttaaggagacaagca 298
Query: 361 ggaatgttcatcctgaaatacttaggtccactttacagatggtttatttttaattgcacc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 297 ggaatgttcatcctgaaatacttaggtccactttacagatggtttatttttaaccgcacc 238
Query: 421 tttttatttatactaggggaacacatatgatagagcgtgctgaagtcagttctcaccttc 480
|||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct: 237 tttttatttatactagggaaacacatacgatagagcgtgctgaagtcagttctcaccttc 178
Query: 481 caccacgtggggtcctggggaccaaactcaggtcatcaggcatggtggtaagcgtcttca 540
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 177 caccacgtggggtcctggggaccaaactcaggtcatcaggcgtggtggtaagcgtcttca 118
Query: 541 cctgatgacccatcttgctggcccccaagaaacgggttaaaacaatactgtttcctagca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117 cctgatgacccatcttgctggcccccaagaaacgggttaaaacaatactgtttcctagca 58
Query: 601 ctcgaagagactttattgttgattttatggttcctggcagtcatccaggntgggttt 657
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 57 ctcgaagagactttattgttgattttatggttcctggcagtcatccaggttgggttt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 679
Length of database: 1079
Length adjustment: 10
Effective length of query: 669
Effective length of database: 1069
Effective search space: 715161
Effective search space used: 715161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
