Query= MSMg01no489_m10.b1 MSMg01no489_m10.b1 CHROMAT_FILE:
MSMg01no489_m10.b1 PHD_FILE: MSMg01no489_m10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:13:08 2005
(545 letters)
>mm_chr9_70239971_70240915
Length = 945
Score = 980 bits (507), Expect = 0.0
Identities = 536/547 (97%), Gaps = 4/547 (0%)
Strand = Plus / Minus
Query: 1 aatctatgcagatgaagagctgactgacgcctgggtttagcagtctagggacctggaagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 aatctatgcagatgaagagctgactgacgcctgggtttagcagtctagggacctggaagc 686
Query: 61 atcacagagcacagccagtcacaacacaactgccattacccaggctaggctagaaagagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 atcacagagcacagccagtcacaacacaactgccattacccaggctaggctagaaagagc 626
Query: 121 ccccaagcctccagaacccagccgatctctagtgtcactaggtggcgatcctgtgtaata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ccccaagcctccagaacccagccgatctctagtgtcactaggtggcgatcctgtgtaata 566
Query: 181 aatatggagaactaatggctttcaacacactgccagaaattgattaatgaggtcgtttag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 aatatggagaactaatggctttcaacacactgccagaaattgattaatgaggtcgtttag 506
Query: 241 gtaccactcccagccagagtgactgccaactcagtgcagaagggccactgagcagagctg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gtaccactcccagccagagtgactgccaactcagtgcagaagggccactgagcagagctg 446
Query: 301 gctccgtcctcagcagagcggatggcagagactttgaggaactgcgtcaatgacttgtga 360
||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||||
Sbjct: 445 gctccgtcctcagcagagcggatggcagagactttcaggaactgtgtcaacgacttgtga 386
Query: 361 aacagtcattaaaaaccaaatcttacctacttacaattaaattagcaaacgaaataagca 420
|||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 385 aacagtcattaaaagccaaatcttaccaacttacaattaaattagcaaacgaaataagca 326
Query: 421 agcttcatcccatcccgtcccccaccccgtccccctctg--cctgcctccccagtcccac 478
|||||||||||||||| ||||||||||||||||| |||| || |||||||||||||||
Sbjct: 325 agcttcatcccatcccatcccccaccccgtccccttctgtccc--cctccccagtcccac 268
Query: 479 acactttctgagtagccatgctggtggctcagcctgacctggctatggtgtgtatattta 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 acactttctgagtagccatgctggtggctcagcctgacctggctatggtgtgtatattta 208
Query: 539 ctatgta 545
|||||||
Sbjct: 207 ctatgta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 545
Length of database: 945
Length adjustment: 10
Effective length of query: 535
Effective length of database: 935
Effective search space: 500225
Effective search space used: 500225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no489_m10.g1 MSMg01no489_m10.g1 CHROMAT_FILE:
MSMg01no489_m10.g1 PHD_FILE: MSMg01no489_m10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:13:08 2005
(322 letters)
>mm_chr9_70072061_70072782
Length = 722
Score = 538 bits (278), Expect = e-157
Identities = 312/324 (96%), Gaps = 2/324 (0%)
Strand = Plus / Plus
Query: 1 acttaagttcagacccctagagcccaaattctagatgcagtgacatccatcttgtatccc 60
|||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||
Sbjct: 201 acttaagttcagacccctagagcccaaattctggatgcagtggcatccatcttgtatccc 260
Query: 61 cagggatcctccagggagctggtggtgtaggaggcaaagatgagggaacccttgggaggt 120
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 261 cagggatcctccagggagctggtggtgtaggaggtaaagatgagggaacccttgggaggt 320
Query: 121 aaagacatggaaatgtctggaagtgtgtgtgccagctagccagagaccctgtctgagata 180
||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaagacatggaaatgcctggaaatgtgtgtgccagctagccagagaccctgtctgagata 380
Query: 181 aggtggaagggaatgattgacacttggcaaggttgtcctctgattgccacagctgcacct 240
||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||
Sbjct: 381 aggtggaagggaatgattgacgcttggcaaggttgtcttctgattgccacagctgcacct 440
Query: 241 tggcacatgaattccacacacaca--aacacacacgcatgcaagcacatgcacgcatgca 298
|||||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||
Sbjct: 441 tggcacatgaattccacacacacatgaacacacacgcatgcaagcacatgcactcgtgca 500
Query: 299 cgagcacacacacaagcatacata 322
||||||||||||||||| ||||||
Sbjct: 501 cgagcacacacacaagcgtacata 524
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 322
Length of database: 722
Length adjustment: 9
Effective length of query: 313
Effective length of database: 713
Effective search space: 223169
Effective search space used: 223169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
