XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCAAAT
CTTGTCTCGATTTCTTCAAGGATCTTCTTGGCCACAATCTGGGCAGTCTC
TGTTTTAGTGGGAAATGCCTCGACCCATCCTGAAAAGGTGTCTACAAATA
CTAACAGATACTTGTTACCATACATTCCAGGTTTAACTTCAGTAAAGTCT
ACTTCCCAATACACTCCAGGACGGTCTCCCCGTTGTCTCTTTCCAGGTTC
TCTGTAGGCTTTAGTTGCATTAGTGAATGCACATGGTTTGCAGGAGTCTA
TAACCTTTTGAGCCACTGACTTCAGGTTGGGGACTTGGTATCGGGAATTT
TTAATTAGTCTCATCATTTTTTCAACTCCCAGGTGGGTGAATTGGTGTAG
TCCTTTCACAAATTTTATTCCTTCTTCGGGAGTTAATTCTATTTTCCCTT
CAAAAAAATATGGGAAGGGATCTCTGGTCCACCATAGCTCTTTTATGTTA
TATCTCTCGTCCTTAGTGCTTTTGGACGGATCACCTTTTTCAGTTAAGAT
CATGGCCCCTTGAGCAACTTGTTTTGCTACTGAGTCTGCCATTCGATTGC
CCCTGGCCACCAAGTCTTCTCCTCTTTGGTGGCCGGGGCAGTGGATGATG
GCTACCTTCTTAGGTGCATGTATGGCTTCCAACAGGGCCAGAATTTCTTC
TTTGNTTTTAATGTCTTTACCAGCCGAGGTCAATAGCCCTCGCTGCC

TGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXCCTGTTCCTTTCATTATAAAATTGAAGCTCCTGG
CTCTGTGTGGTGGCAAATTCTGCATACCCCATCCATGGCAGACTGAAATA
AGAAGCTAGATGAGGCCGAACAATTTGAGGCCCCTTCTTGAGAAAAAGAA
AAGGAAGTGAAGTAATCCCTCTGACCCACTAAGGATTTCCTAGGGATTTT
ACTGGGGAGTGTTTGTAAGAGCTCCTTTTACCTCCAGTGAGGTCACTGCA
GCCTCCCCTCCTCTCCCTCATTTTCTTGTGATTCTTTACCATCTGCCTGC
TCCTTCTGAGTTTGTTTGCTGAAACCTTGAGATGCGTGCGTCATTGTTAC
GTGACACTGTTCTATGGGGAGGTGTGAGCACACCTGTACTCACCCCAGAT
AAGGAACCAGGGAACTGACCACAGATCAGTCTCACTTTGTGAACCAATGA
GCTTTATTGAACGTATTTACAGGAATTTGGGTGAGAGATTACTAACAGCA
GAAATGACTGCAGCATGACTTTAAAAAACCACCCAAGCCTGGATGACAGC
TCACAAAATCTAGAAACCTGGAGTGTACTGTACAGCTCAGCTGGTTTGAG
GCCTTTCCAGGTAGCTCTGTTGATCTGAGACTCTTCCAGGCAAGTGGGCT
AGATTCTTTTTTTTTTTTTCTTTCGCAGGTAGCTTGGGGGATGAACCTCT
TCACGCTTCTGTGC

Query= MSMg01no491_k24.g1 MSMg01no491_k24.g1 CHROMAT_FILE:
MSMg01no491_k24.g1 PHD_FILE: MSMg01no491_k24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:15:40 2005
         (587 letters)



>mm_chr9_53375234_53376220
          Length = 987

 Score = 1104 bits (571), Expect = 0.0
 Identities = 583/587 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   cctgttcctttcattataaaattgaagctcctggctctgtgtggtggcaaattctgcata 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cctgttcctttcattataaaattgaagctcctggctctgtgtggtggcaaattctgcata 260

                                                                       
Query: 61  ccccatccatggcagactgaaataagaagctagatgaggccgaacaatttgaggcccctt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccccatccatggcagactgaaataagaagctagatgaggccgaacaatttgaggcccctt 320

                                                                       
Query: 121 cttgagaaaaagaaaaggaagtgaagtaatccctctgacccactaaggatttcctaggga 180
           |||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||
Sbjct: 321 cttgagaaaaagaaaaggaagtgaagcaatccccctgacccactaaggatttcctaggga 380

                                                                       
Query: 181 ttttactggggagtgtttgtaagagctccttttacctccagtgaggtcactgcagcctcc 240
           ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 381 ttttactggagagtgtttgtaagagctccttctacctccagtgaggtcactgcagcctcc 440

                                                                       
Query: 241 cctcctctccctcattttcttgtgattctttaccatctgcctgctccttctgagtttgtt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cctcctctccctcattttcttgtgattctttaccatctgcctgctccttctgagtttgtt 500

                                                                       
Query: 301 tgctgaaaccttgagatgcgtgcgtcattgttacgtgacactgttctatggggaggtgtg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgctgaaaccttgagatgcgtgcgtcattgttacgtgacactgttctatggggaggtgtg 560

                                                                       
Query: 361 agcacacctgtactcaccccagataaggaaccagggaactgaccacagatcagtctcact 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agcacacctgtactcaccccagataaggaaccagggaactgaccacagatcagtctcact 620

                                                                       
Query: 421 ttgtgaaccaatgagctttattgaacgtatttacaggaatttgggtgagagattactaac 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttgtgaaccaatgagctttattgaacgtatttacaggaatttgggtgagagattactaac 680

                                                                       
Query: 481 agcagaaatgactgcagcatgactttaaaaaaccacccaagcctggatgacagctcacaa 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 agcagaaatgactgcagcatgactttaaaaaaccacccaagcctggatgacagctcacaa 740

                                                          
Query: 541 aatctagaaacctggagtgtactgtacagctcagctggtttgaggcc 587
           |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 aatctagaaacctggagtgtactgtacagctcagctggtttgaggcc 787


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 587
Length of database: 987
Length adjustment: 10
Effective length of query: 577
Effective length of database: 977
Effective search space:   563729
Effective search space used:   563729
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)