Query= MSMg01no494_i10.b1 MSMg01no494_i10.b1 CHROMAT_FILE:
MSMg01no494_i10.b1 PHD_FILE: MSMg01no494_i10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:19:23 2005
(520 letters)
>mm_chr9_28828851_28829769
Length = 919
Score = 980 bits (507), Expect = 0.0
Identities = 516/519 (99%), Gaps = 1/519 (0%)
Strand = Plus / Minus
Query: 2 tcaagccctcaagcagacttacctgggatatgcaacaatacttgatttgtttttaagaag 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 tcaagccctcaagcagacttacctgggatatgcaacaatacttgatttgtttttaagaag 468
Query: 62 aagtgatcccgagaaattgtatttcttgtaaatcaaatcctattttaagtggaaagagta 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 aagtgatcccgagaaattgtatttcttgtaaatcaaatcctattttaagtggaaagagta 408
Query: 122 gagatgctaattaagggatatatgatgaatcctttgtagagtttattacatccctaccag 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 gagatgctaattaagggatatatgatgaatcctttgtagagtttattacatccctaccag 348
Query: 182 caaagatgatatctgaccttctttcatttcttagctgagatttgcttgccttgctttttt 241
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 347 caaagatgatatctgaccttctttcatttcttagctgagatttgcttgccttgc-ttttt 289
Query: 242 tatattaaagtgcccaaatttagttcataccactgaaactagtaggtgtggtatttctat 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 tatattaaagtgcccaaatttagttcataccactgaaactagtaggtgtggtatttctat 229
Query: 302 tcattgaggggaatgcccatcttatgcactcatttcatgcctacaattatcctgtaagac 361
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 228 tcattgaggggaatgcccatattatgcactcatttcatgcctacaattatcctgtaagac 169
Query: 362 aagtgacattccatcttatggaagaggagtctcaaccacacagatgctatcgtccactgc 421
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 168 aagtgacattccatcttctggaagaggagtctcaaccacacagatgctatcgtccactgc 109
Query: 422 aatccagaggatgtgagttgcatccaaacttgtggctgttcacttgaagcctggaagtgt 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108 aatccagaggatgtgagttgcatccaaacttgtggctgttcacttgaagcctggaagtgt 49
Query: 482 tccctatagtctcagcatctcttcactcattctttccag 520
|||||||||||||||||||||||||||||||||||||||
Sbjct: 48 tccctatagtctcagcatctcttcactcattctttccag 10
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 520
Length of database: 919
Length adjustment: 10
Effective length of query: 510
Effective length of database: 909
Effective search space: 463590
Effective search space used: 463590
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no494_i10.g1 MSMg01no494_i10.g1 CHROMAT_FILE:
MSMg01no494_i10.g1 PHD_FILE: MSMg01no494_i10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:19:23 2005
(237 letters)
>mm_chr9_28660937_28661573
Length = 637
Score = 451 bits (233), Expect = e-131
Identities = 236/237 (99%)
Strand = Plus / Plus
Query: 1 agggcatggggattgctttttacctctgcatgaaatgctctctccaaagagaatgaaggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agggcatggggattgctttttacctctgcatgaaatgctctctccaaagagaatgaaggc 260
Query: 61 ataaagttggatgggtggggagaatctgggcatagaagagtgagggagaaccaggttcaa 120
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 261 ataaagttggatgggtggggagaatctgggcagagaagagtgagggagaaccaggttcaa 320
Query: 121 aatatgtggtataaaaaaattatttcccataaaaaaacgatgctgtccaaaaatccacaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aatatgtggtataaaaaaattatttcccataaaaaaacgatgctgtccaaaaatccacaa 380
Query: 181 ggctcaactaatatgacttgggatcagtgaaactttgaatcagtctacaaaaaccag 237
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggctcaactaatatgacttgggatcagtgaaactttgaatcagtctacaaaaaccag 437
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 237
Length of database: 637
Length adjustment: 9
Effective length of query: 228
Effective length of database: 628
Effective search space: 143184
Effective search space used: 143184
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
