Query= MSMg01no495_j05.b1 MSMg01no495_j05.b1 CHROMAT_FILE:
MSMg01no495_j05.b1 PHD_FILE: MSMg01no495_j05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:20:40 2005
(192 letters)
>mm_chr9_80219506_80220100
Length = 595
Score = 192 bits (99), Expect = 2e-53
Identities = 119/127 (93%), Gaps = 5/127 (3%)
Strand = Plus / Minus
Query: 1 actcacactccaattcagatgattctacacaccaaacggtttgcaggaattctcgag-ca 59
||||||||||||||||||||||||||||||| |||||||||||||||||||||| || ||
Sbjct: 326 actcacactccaattcagatgattctacacatcaaacggtttgcaggaattctc-agaca 268
Query: 60 cttcatctcttgttgatgccaccgtttctccttc---attttatagggcactctctttct 116
|||||||||| |||||||||| |||||||||||| |||||||||||||||||||||||
Sbjct: 267 cttcatctctcgttgatgccatcgtttctccttcttcattttatagggcactctctttct 208
Query: 117 cctccca 123
|||||||
Sbjct: 207 cctccca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 192
Length of database: 595
Length adjustment: 8
Effective length of query: 184
Effective length of database: 587
Effective search space: 108008
Effective search space used: 108008
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no495_j05.g1 MSMg01no495_j05.g1 CHROMAT_FILE:
MSMg01no495_j05.g1 PHD_FILE: MSMg01no495_j05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:20:40 2005
(240 letters)
>mm_chr9_80063216_80063854
Length = 639
Score = 418 bits (216), Expect = e-121
Identities = 234/240 (97%), Gaps = 1/240 (0%)
Strand = Plus / Plus
Query: 1 actctttctagtctcctgtctcctcttactctcctggatggtgtgagcagttcattcatg 60
|||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 201 actctttctagtctcccgtctcctcttactctcctggatggtatgagcagttcattcatg 260
Query: 61 caccagtgactgtcaagttgtgtatatcatgctgggccttaggagcaagcagtcaatggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caccagtgactgtcaagttgtgtatatcatgctgggccttaggagcaagcagtcaatggt 320
Query: 121 ctgtgccctgatggaattacagtggcacaatgagatgggtgcttcagcaggattattcct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 321 ctgtgccctgatggaattacagtggcacaatgagatgggtgcttcagcaggattagtcct 380
Query: 181 gacccgaggaattcaagagtagaagcaggtatacaggtacactgtagaagccttggtaaa 240
|||||||||||| ||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 381 gacccgaggaatccaagagtagaagcaggtatacag-tatactgtagaagccttggtaaa 439
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 240
Length of database: 639
Length adjustment: 9
Effective length of query: 231
Effective length of database: 630
Effective search space: 145530
Effective search space used: 145530
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
