NNNNGGGTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXCCAAAGAGGA
TGCGCGGAATTCTACTAATTCATACAATCAGGCAGGACTATTGGGGGCTG
GAAAGCTGCCTCTGCTTTTAAGACCATGCACTGCTTTTGAAGAGGACCTG
AGGACCACCATCTAGGATGAATGGCTTATAACCAACTGTAACTCCAGCTT
CAGGGGCCTCAACACCCTCTTCTGGCCTTCATGGGTACTTCCACTCACAT
GCATATAACTGTCAGAATACAGTCCATGAACAACACTGTATGAAGAATTG
TGAGACCTTTAGAGAAAACTCCTTGTTTATAGACAAGAGTCTTGAGACTC
TTCAAAACAAGGACTTGTTCTTGGAATGTGTTTTTGTGCTCCTTCCTGGT
ATAGCACATAGAGGTGAGTTTACTTCATATTATTCATTATTGCTTACTAC
TTTATTCAATTAAATGCTTAAACTATTCCTTATAGGTCTGTATAGATAAA
CATGCCACACCCAGCTTGTCCTTGTGACTGTATCCAGCTTGGACTCACTA
GAACTTTACTCGGGTGACTCTTAACCCTCAGAGTAGAAACTGTCCAATGC
TCTGAGTAAAGTTGGCTATCGAATGAGACTTTAGTCTGCCTCACTTTTAG
GCTCTACTCTTCCTGGTTCATGCCTCCAACTAGAGTGGTAAATATATACC
CTCACACACATTTACACAGTTCATAATTAAATGTGAAAAAT

TTTTTCCCAATGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXTTACTCAAGGAATTCTCACCTGAGGAATACCGAA
TGGCTGAGAAGCACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAA
ATGCAAATCAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGC
TAAGATAAAAAATTCAGTTGACAGCAGATGCTGGCGAGGATGTGGAGAAA
GAGGACCACTCCTCCATTGTTGGTGGGATTGCAAGCTTGTACAACCACTC
TGGAAATCAGTCTGGCAGTTCCTTATTTTATTGGACATAGTACTACCGGA
AGATCCAGCAATACCTCTCCTGGGCATATATCCAGAAGATGTCCCAACTG
ATAAGAAGGACACATGGTCCACTATGTTCATAGCAGCCTTATTTATAATA
GCCAGAAGCTGGAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACA
GAAAATGTGCTACATTTGTTCAGTTCTTAAGCCTTGGCTCATCTTCATCC
TTTCCACCAGTCTTGTGCTTATGTTGCCCTGGATACCACTTCAGTCATTT
ATCCCCATTGTTTTAGTTACTGTTATATTGTTGTGAAGAGATACCATGAC
CAAGACAACCTATAGAAGAAAACACTTAATTGGGGATTTGCTTATAGCTG
CAGAGAGTCTGTCCATTATCGTGGCAGGGAGTGTGCTGCAAACAGGCAG

Query= MSMg01no496_l05.b1 MSMg01no496_l05.b1 CHROMAT_FILE:
MSMg01no496_l05.b1 PHD_FILE: MSMg01no496_l05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:22:07 2005
         (623 letters)



>mm_chr9_22655848_22656872
          Length = 1025

 Score = 1116 bits (577), Expect = 0.0
 Identities = 612/631 (96%), Gaps = 14/631 (2%)
 Strand = Plus / Minus

                                                                       
Query: 1   gcaggactattgggggctggaaagctgcctctgcttttaagaccatgcactgcttttgaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 999 gcaggactattgggggctggaaagctgcctctgcttttaagaccatgcactgcttttgaa 940

                                                                       
Query: 61  gaggacctgaggaccaccatctaggatgaatggcttataaccaactgtaactccagcttc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 939 gaggacctgaggaccaccatctaggatgaatggcttataaccaactgtaactccagcttc 880

                                                                       
Query: 121 aggggcctcaacaccctcttctggccttcatgggtacttccactcacatgcatataactg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 879 aggggcctcaacaccctcttctggccttcatgggtacttccactcacatgcatataactg 820

                                                                       
Query: 181 tcagaatacagtccatgaacaacactgtatgaagaattgtgagacctttagagaaaactc 240
           ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||
Sbjct: 819 tcagaatacagtccatgaacaacgctgtatgaagaactgtgagacctttagagaaaactc 760

                                                                       
Query: 241 cttgttta-------tagacaagagtcttgagactcttcaaaacaaggacttgttcttgg 293
           |      |        ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 759 c------aaggaaacaagacaagagtcttgagactcttcaaaacaaggacttgttcttgg 706

                                                                       
Query: 294 aatgtgtttttgtgctccttcctggtatagcacatagaggtgagtttacttcatattatt 353
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 705 aatgtgtttttgtgctccttcctggtatagcacatagaggtgaatttacttcatattatt 646

                                                                       
Query: 354 cattattgcttactact-ttattcaattaaatgcttaaactattccttataggtctgtat 412
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 cattattgcttactactgttattcaattaaatgcttaaactattccttataggtctgtat 586

                                                                       
Query: 413 agataaacatgccacacccagcttgtccttgtgactgtatccagcttggactcactagaa 472
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 agataaacatgccacacccagcttgtccttgtgactgtatccagcttggactcactagaa 526

                                                                       
Query: 473 ctttactcgggtgactcttaaccctcagagtagaaactgtccaatgctctgagtaaagtt 532
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 ctttactcgggtgactcttaaccctcagagtagaaactgtccaatgctctgagtaaagtt 466

                                                                       
Query: 533 ggctatcgaatgagactttagtctgcctcacttttaggctctactcttcctggttcatgc 592
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 ggctatcgaatgagactttagtctgcctcacttttaggctctactcttcctggttcatgc 406

                                          
Query: 593 ctccaactagagtggtaaatatataccctca 623
           |||||||| ||||||||||||||||||||||
Sbjct: 405 ctccaactggagtggtaaatatataccctca 375


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 623
Length of database: 1025
Length adjustment: 10
Effective length of query: 613
Effective length of database: 1015
Effective search space:   622195
Effective search space used:   622195
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)