Query= MSMg01no499_n03.b1 MSMg01no499_n03.b1 CHROMAT_FILE:
MSMg01no499_n03.b1 PHD_FILE: MSMg01no499_n03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:26:18 2005
(631 letters)
>mm_chr9_66819902_66820932
Length = 1031
Score = 696 bits (360), Expect = 0.0
Identities = 369/372 (99%)
Strand = Plus / Minus
Query: 5 gaattcagcgaagattctcaaaaacagaaaactacaatatgaggaattatgaagaatggt 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 gaattcagcgaagatgctcaaaaacagaaaactacaatatgaggaattatgaagaatggt 313
Query: 65 gatgttttctttaaggaatgtaaattatttaaagtgtagactagcaagcatggttatacg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 gatgttttctttaaggaatgtaaattatttaaagtgtagactagcaagcatggttatacg 253
Query: 125 aatctggctacaatatctgtcaccccaattttgataccaaagtctatattagggttctct 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 aatctggctacaatatctgtcaccccaattttgataccaaagtctatattagggttctct 193
Query: 185 cagaacttatggaatgaatctctctctgtttatgtaaaaagtggatttataagaatggct 244
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 192 cagaacttatggaatgaatctctctctgtttatgtagaaagtggatttataagaatggct 133
Query: 245 tccaggctgtggttggctactccaacaatggcaggctgtgtatgaaaagtcttaagattc 304
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 132 tccaggctgtggttggctactccaacaatggcaggctgtgaatgaaaagtcttaagattc 73
Query: 305 cagtatgtgttcagtcatcaaagctagatgtctcagctggtcttcattaaatgttggagt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 cagtatgtgttcagtcatcaaagctagatgtctcagctggtcttcattaaatgttggagt 13
Query: 365 cccaggaaatag 376
||||||||||||
Sbjct: 12 cccaggaaatag 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 631
Length of database: 1031
Length adjustment: 10
Effective length of query: 621
Effective length of database: 1021
Effective search space: 634041
Effective search space used: 634041
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no499_n03.g1 MSMg01no499_n03.g1 CHROMAT_FILE:
MSMg01no499_n03.g1 PHD_FILE: MSMg01no499_n03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:26:18 2005
(283 letters)
>mm_chr9_66643922_66644605
Length = 684
Score = 424 bits (219), Expect = e-123
Identities = 268/293 (91%), Gaps = 19/293 (6%)
Strand = Plus / Plus
Query: 1 ccagagagcagccttttccggtcacatatcagtagggctatgacgggttatgccagatga 60
|||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 201 ccagagagcagcctttcccggtcacatatcagtagggctatgaagggttatgccagatga 260
Query: 61 agaggtttctggtcatcacaaatcagagaaaattccagagcaaccagcagaatcttcatc 120
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 261 agaggtttctggtcatcacaaaccagagaaaattccagagcaaccagcagaatcttcatc 320
Query: 121 ttcctagttcttgtcttccctcatctccagaagttagaagtgggtcagttgtta----tt 176
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 321 ttcctagttcttgtcttccctcatctccagaagttagaagtgggtcagttgttagaaat- 379
Query: 177 tttaaactgactt-----cactctttaattaggttcactctaaataataaggttctttta 231
|||||||||| ||||||||||||||||||||||||| |||||||||||||
Sbjct: 380 ---aaactgacttgacttcactctttaattaggttcactctaa----taaggttctttta 432
Query: 232 gcccgatga-tcggataattaattattgctctttaagagaccttggtgaaatg 283
||||||||| | ||| || ||||||||| ||||||||||||||||||||||||
Sbjct: 433 gcccgatgagt-ggaaaactaattattgttctttaagagaccttggtgaaatg 484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 283
Length of database: 684
Length adjustment: 9
Effective length of query: 274
Effective length of database: 675
Effective search space: 184950
Effective search space used: 184950
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
