GACTCACTATATCCAGAGGATCCGCGGAATTCATATGATGTACTGCTTTT
GGGTGTTTGTCTTTTCACAGATTATTAGCCTACTTCTAGCCTCAAGAATA
TCTTTTTATCTTTCTTAATAAACTGCCTGTGTTTCTATCATTATCTATAT
GTTCATTATTCTGGCACACAGACCCTAGAAATCCCAGGAGGTGCTCTCTG
GATTGAAGTGTGCACTTATAGCACCACCTCAGTGCTTATGACTCATGTTT
GAAGTGAGGTCTGAGCATCAACAACACGTTCCCAGGTGATGGACGTGATT
CTTGTCCCAAGATCACACTTTCAGAATTATGTTGTAACTGTGATGCTTTC
AGAGACTCAACAATTGAAAATGAGGATGTCACAAGTGTTGTAGGGGGAAT
ATATGGGCTCTTTAGATGTTTATGATAAGGCTATATGCTATCACGGTCAG
CTGATAAGATATGCTAGTCTATCTGAAATATTACTATAGGGGGAACTTAC
GGTTCTATCAGTCTATCAGTTTTATACAGTTGAGCTTTTCTTGAGTATAT
GTGTTTAGTACTATGAACTAGAAGCTGTGAGAGACACAAAGATGAAGGAG
GAAAATGGAGTGGCTATGGCTCANGCACCTTTCTCTCATTCCTTTTCTTC
TGATTATAGCTTCTTGGGGATGTAACTTCTAAGCCTTT

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXCTGATCTTTCCAAGACTTTTATCATGAATGGGTGTTGGATCT
TGTCAAATGCTTTCTCCGAATCTAACGAGATGATCCTGTGGTTTTTGTCT
TTGAGTTTGTTTATATAATGGATTACGTTGATGGATTTCAGTATATTAAC
CATCCTTGCATCCCTGGAATAAAACCTACTTGGTCAGGATGGATGATTGC
TTTAATGTGTTCTTGGATTCGGTTAGCGATTATTTTATTGAGTATTTTTG
CTTTTTATTGAGTATTTTGATATTTACAAGGGAAATTGGTCTGAAGTTCT
CTATCTTTGTTGGATCTTTCTGTGGTTTAGGTATCAGAGTAATTGTGGCT
TCATAAAATGAGTTGGGTAGAGTACCTTCTACTTCTATTTTGTGGAATAG
TTTGTGCAGAACTGCAATTAGATCTTCCTTGAAGGTCTGATAGAACTCTG
CACTAAACCCATCTGGTCCTGGGATTTTTTTGGTTGGGAGACTTTTAATG
ACTGCTTCTATTTCGTTAGGGGACATGGGACTATTTAGATCGTTAACTTG
ATCCTGATTTAACTTTGGTACCTGGTATCTGTCTAGAAATTTGTCCATTT
CATCCAGGTTTTCCAGTTTTGTTGAGTATAGCCTTTTGTAGAAGGATCTG

Query= MSMg01no501_j11.b1 MSMg01no501_j11.b1 CHROMAT_FILE:
MSMg01no501_j11.b1 PHD_FILE: MSMg01no501_j11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:28:27 2005
         (629 letters)



>mm_chr9_123945115_123946143
          Length = 1029

 Score = 1087 bits (562), Expect = 0.0
 Identities = 604/619 (97%), Gaps = 2/619 (0%)
 Strand = Plus / Plus

                                                                       
Query: 7   gaattcatatgatgtactgcttttgggtgtttgtcttttcacagattattagcctacttc 66
           |||||||||||||| | ||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 207 gaattcatatgatgcagtgcttttgggtgtttgtcttttcacagatcattagcctacttc 266

                                                                       
Query: 67  tagcctcaagaatatctttttatctttcttaataaactgcctgtgtttctatcattatct 126
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 tatcctcaagaatatctttttatctttcttaataaactgcctgtgtttctatcattatct 326

                                                                       
Query: 127 atatgttcattattctggcacacagaccctagaaatcccaggaggtgctctctggattga 186
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 327 atatgttcattattctggcacacagaccctagaaatctcaggaggtgctctctggattga 386

                                                                       
Query: 187 agtgtgcacttatagcaccacctcagtgcttatgactcatgtttgaagtgaggtctgagc 246
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 agtgtgcacttatagcaccacctcagtgcttatgactcatgtttgaagtgaggtctgagc 446

                                                                       
Query: 247 atcaacaacacgttcccaggtgatggacgtgattcttgtcccaagatcacactttcagaa 306
           |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 447 atcaacaacacgttcccaggtggtggacgtgatacttgtcccaagatcacactttcagaa 506

                                                                       
Query: 307 ttatgttgtaactgtgatgctttcagagactcaacaattgaaaatgaggatgtcacaagt 366
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 507 ttatgttgtaactgtgatgcgttcagagactcaacaattgaaaatgaggatgtcacaagt 566

                                                                       
Query: 367 gttgtagggggaatatatgggctctttagatgtttatgataaggctatatgctatcacgg 426
           |||||||| ||||||||||||||||||||||||||  ||||||| |||||||||||| ||
Sbjct: 567 gttgtaggaggaatatatgggctctttagatgttt--gataaggttatatgctatcatgg 624

                                                                       
Query: 427 tcagctgataagatatgctagtctatctgaaatattactatagggggaacttacggttct 486
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 625 tcagctgataagatatgctagtctatctgaaatattactatagggggaacttacagttct 684

                                                                       
Query: 487 atcagtctatcagttttatacagttgagcttttcttgagtatatgtgtttagtactatga 546
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 atcagtctatcagttttatacagttgagcttttcttgagtatatgtgtttagtactatga 744

                                                                       
Query: 547 actagaagctgtgagagacacaaagatgaaggaggaaaatggagtggctatggctcangc 606
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 745 actagaagctgtgagagacacaaagatgaaggaggaaaatggagtggctatggctcaggc 804

                              
Query: 607 acctttctctcattccttt 625
           |||||||||||||||||||
Sbjct: 805 acctttctctcattccttt 823


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 629
Length of database: 1029
Length adjustment: 10
Effective length of query: 619
Effective length of database: 1019
Effective search space:   630761
Effective search space used:   630761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)