Query= MSMg01no502_c18.b1 MSMg01no502_c18.b1 CHROMAT_FILE:
MSMg01no502_c18.b1 PHD_FILE: MSMg01no502_c18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:29:08 2005
(560 letters)
>mm_chr9_102200513_102201477
Length = 965
Score = 1042 bits (539), Expect = 0.0
Identities = 556/565 (98%), Gaps = 7/565 (1%)
Strand = Plus / Plus
Query: 1 atgattattttcaacagctacaataaggtcttcctaaaaaattcatttcttcagagttta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 atgattattttcaacagctacaataaggtcttcctaaaaaattcatttcttcagagttta 262
Query: 61 cacacacacacacacacacacacacacacacacacacaaaccagtatactttctaaacaa 120
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 263 cacacacacacacacacacacacacacacacacaca--aaccagtatactttctaaacaa 320
Query: 121 ttaactagacaatggccatatattcagtttcaaaaaacaggggaatagttaaatattata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttaactagacaatggccatatattcagtttcaaaaaacaggggaatagttaaatattata 380
Query: 181 cagccacttggtgaactattacgaagccatcaaaaatggaatttgtacagcaaggaaatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cagccacttggtgaactattacgaagccatcaaaaatggaatttgtacagcaaggaaatg 440
Query: 241 ttaacagtaaaatgatgacgagaaaaaccactagatcctaagttacgaaggcagatctga 300
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 441 ttaacagtaaaatgatgacgagaaaaaccactagatcctaagttacaaaggcagatctga 500
Query: 301 aaagccataggcatggggcatttatgcagttatgcagggaagtcacacaaagtgaatata 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaagccataggcatggggcatttatgcagttatgcagggaagtcacacaaagtgaatata 560
Query: 361 gtgattgcataaccaaaagcattattttaaacatggaaaagaattggaaattaaacactt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gtgattgcataaccaaaagcattattttaaacatggaaaagaattggaaattaaacactt 620
Query: 421 gttaattggatgaatgactgccctcaggcagggggaattctaagccttaatggtgcggct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gttaattggatgaatgactgccctcaggcagggggaattctaagccttaatggtgcggct 680
Query: 481 ggcaggctcctcgggacagaagg-----tctccaggctccaagggaagatgctatttatg 535
||||||||||||||||||||||| |||||||||||| |||||||||||||||||||
Sbjct: 681 ggcaggctcctcgggacagaaggcaaggtctccaggctccgagggaagatgctatttatg 740
Query: 536 tcattctatgaccagccatggcagg 560
|||||||||||||||||||||||||
Sbjct: 741 tcattctatgaccagccatggcagg 765
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 56
Number of extensions: 11
Number of successful extensions: 11
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4
Number of HSP's successfully gapped: 1
Length of query: 560
Length of database: 965
Length adjustment: 10
Effective length of query: 550
Effective length of database: 955
Effective search space: 525250
Effective search space used: 525250
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no502_c18.g1 MSMg01no502_c18.g1 CHROMAT_FILE:
MSMg01no502_c18.g1 PHD_FILE: MSMg01no502_c18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:29:08 2005
(648 letters)
>mm_chr9_102383529_102384576
Length = 1048
Score = 582 bits (301), Expect = e-170
Identities = 319/325 (98%)
Strand = Plus / Minus
Query: 1 tcttaggagcgaggggtgtctgaacaatgcagctctactttgctgttccttggcttatat 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tcttaggagcgaggggtgtttgaacaatgcagctctactttgctgttccttggcttatat 266
Query: 61 gggtctagtagtgtccctctgttcccaaaggggttggggccaataggttaagaaccactg 120
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gggtctagtagtgtccctctgctcccaaaggggttggggccaataggttaagaaccactg 206
Query: 121 gtctagaacaagaaaagactatttgtcctcacttatcaccactgtactggaagtcgtctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gtctagaacaagaaaagactatttgtcctcacttatcaccactgtactggaagtcgtctt 146
Query: 181 catgaaaattggccaagaaaaggaaataaaaagcatccagatcagaaaaaacaaacaaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 catgaaaattggccaagaaaaggaaataaaaagcatccagatcagaaaaaacaaacaaac 86
Query: 241 aaaatcccagtagaactatttgaaggtgacaggatctcaggtatgtgaagtcctaaggaa 300
|||| ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||
Sbjct: 85 aaaaccccagtagaactattcgaaggtgacaggatctcaggtatgtcaagtcctaaggaa 26
Query: 301 gccatggaaaagtatattaatctga 325
|||| ||||||||||||||||||||
Sbjct: 25 gccacggaaaagtatattaatctga 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 648
Length of database: 1048
Length adjustment: 10
Effective length of query: 638
Effective length of database: 1038
Effective search space: 662244
Effective search space used: 662244
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
