Query= MSMg01no511_e13.b1 MSMg01no511_e13.b1 CHROMAT_FILE:
MSMg01no511_e13.b1 PHD_FILE: MSMg01no511_e13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:41:06 2005
(644 letters)
>mm_chr9_32148050_32149093
Length = 1044
Score = 1139 bits (589), Expect = 0.0
Identities = 631/645 (97%), Gaps = 2/645 (0%)
Strand = Plus / Plus
Query: 1 agatggctgagggatagactcttagaacacagactcagctccaaatggcatctgagtcct 60
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 201 agatggctgagggatagactcttagaacacagcctcagctccaaatggcatctgagtcct 260
Query: 61 cttggttcttgctttgcccctttctcactaaggtctccctagttgtaagattgggagtct 120
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 261 cttggttcttgctttgcccctttctcactaaagtctccctagttgtaagattgggagtct 320
Query: 121 gggatgggaaagaagctgagagacaggcagtaattcccagcctaaacagctatgtcaggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gggatgggaaagaagctgagagacaggcagtaattcccagcctaaacagctatgtcaggg 380
Query: 181 ccacgaggagaggaggtacctgccaatccctgccctgctccatctgctttatcatctctc 240
||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 381 ccacgaggagaggagctacctgccaatccctgccctgctccgtctgctttatcatctctc 440
Query: 241 ccagactctgctcagcctacgcacttgtccttggagaccaggaagatcagttgctacctg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccagactctgctcagcctacgcacttgtccttggagaccaggaagatcagttgctacctg 500
Query: 301 ctaactg-tctgattatccctgacctttgcccccagcctgctctggtctggactgacaga 359
|| | || ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctgattggtctgattatccctgacctttgcccccagcctgctctggtctggactgacaga 560
Query: 360 agaacttaagatttaacctctagccaggacccccagggtcctatgtgacatttagcttta 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agaacttaagatttaacctctagccaggacccccagggtcctatgtgacatttagcttta 620
Query: 420 acacagctcttggcaaaggttgatgtcaccctgggctctgttgacaagaatagccccctt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 621 acacagctcttggcaaaggttgatgtcaccctgggctctgttgacaagaatagcctcctt 680
Query: 480 atcataaagtcaaggtaggcgggaccagacatccaggacagctacccagtccctcccatt 539
|||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||||
Sbjct: 681 atcagaaagtcaaggtaggcgggaccagatacccaggacagctacccagtccctcccatt 740
Query: 540 gcctttcctctgtcggcttttaaaataatctaaaagaaatccacttcctaaattgctttg 599
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 741 gcctttcctctgtcggcttttaaaataatctaaaagaaacccacttcctaaattgctttg 800
Query: 600 ggaaaaaaaatacattcaggtaaatttattcacatttctcccagt 644
| |||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 801 g-aaaaaaaatacattcaggcaaatttattcacatttctcccagt 844
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 644
Length of database: 1044
Length adjustment: 10
Effective length of query: 634
Effective length of database: 1034
Effective search space: 655556
Effective search space used: 655556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no511_e13.g1 MSMg01no511_e13.g1 CHROMAT_FILE:
MSMg01no511_e13.g1 PHD_FILE: MSMg01no511_e13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:41:06 2005
(523 letters)
>mm_chr9_32341900_32342821
Length = 922
Score = 988 bits (511), Expect = 0.0
Identities = 520/523 (99%), Gaps = 1/523 (0%)
Strand = Plus / Minus
Query: 1 cttaaatattgtgataaaagattgagtctttataaaatatataatcagaaataatcaatg 60
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 525 cttaaatattgtgataaaagattgagtc-ttataaaatatataatcagaaataatcaatg 467
Query: 61 tttaaatttatggtagtctacatagccgtacaaatcccttagtgactgtcctaccactgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 tttaaatttatggtagtctacatagccgtacaaatcccttagtgactgtcctaccactgt 407
Query: 121 cttcttgctgcctagtcaataggaatgacagtggcttattagaaactttactagaaactt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 cttcttgctgcctagtcaataggaatgacagtggcttattagaaactttactagaaactt 347
Query: 181 ctggtgagccgtaaggacaagacagtagagatgagtttgggaaaacagaaaggtccaccc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 ctggtgagccgtaaggacaagacagtagagatgagtttgggaaaacagaaaggtccaccc 287
Query: 241 gacagtgcttactaagtaggcactaagcaagggagggaaaattccatctcttctgctgtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 gacagtgcttactaagtaggcactaagcaagggagggaaaattccatctcttctgctgtt 227
Query: 301 ataaaaatgtggttacacaagagcgaggcgcatgcctgcattcccagcacttaaaatata 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 ataaaaatgtggttacacaagagcgaggcgcatgcctgcattcccagcacttaaaatata 167
Query: 361 gagacaggagaatcccaagtccaaggacagtctgggacacttagtgatttcaaagtcagg 420
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 166 gagacaggagaatcccaagcccaaggacagtctgggacacttagtgatttcaaagtcagg 107
Query: 421 ctgcgccacatgccaaaacccggtttccaagagccaagggctgtcaattcagtttagtgg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106 ctgcgccacatgccaaaacccggtttccaagagccaagggctgtcaattcagtttagtgg 47
Query: 481 tcaagcatgcgcctagtctgcacaaggctggatctgatcccca 523
|||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 46 tcaagcatgcgcctcgtctgcacaaggctggatctgatcccca 4
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 523
Length of database: 922
Length adjustment: 10
Effective length of query: 513
Effective length of database: 912
Effective search space: 467856
Effective search space used: 467856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
