Query= MSMg01no511_j18.b1 MSMg01no511_j18.b1 CHROMAT_FILE:
MSMg01no511_j18.b1 PHD_FILE: MSMg01no511_j18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:41:31 2005
(634 letters)
>mm_chr9_59830037_59831070
Length = 1034
Score = 1091 bits (564), Expect = 0.0
Identities = 617/640 (96%), Gaps = 9/640 (1%)
Strand = Plus / Minus
Query: 4 ggaattcttgaagatttccatagtcaggaccac---------atgaattgtttgtttcta 54
|||||||||||||| | |||||||||||||| ||||||||||||||||||
Sbjct: 957 ggaattcttgaagaatgggatagtcaggaccacttaaaatggatgaattgtttgtttcta 898
Query: 55 gagtttcccacataacacgtacgaacatgtgtctgtgagtaactaaaaccctagaagaca 114
||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 897 gagtttcccacgtaacacgtacaaacatgtgtctgtgagtaactaaaaccctagaagaca 838
Query: 115 aaagtaatagatgaggagactcccatcctggagagtgtcctgtgtgggaaaaggttgtca 174
||||||||||||||||||||||||||||| |||||||| ||| ||| |||||||||||||
Sbjct: 837 aaagtaatagatgaggagactcccatcctagagagtgtactgagtgagaaaaggttgtca 778
Query: 175 gctatgtatagaagaaagcgccagaggtcagtgagcccttggcatcatttggaaggatcc 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 777 gctatgtatagaagaaagcgccagaggtcagtgagcccttggcatcatttggaaggatcc 718
Query: 235 ccagaacctgcatgggcccccgctaatgtgccttccttctgtctcacagtgctcagcgga 294
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 717 ccagaacctgcatgggcccccactaatgtgccttccttctgtctcacagtgctcagcgga 658
Query: 295 gtgtggggcaggagtgaggacacgttcagtggtgtgcatgaccaaccacgtcagcagcct 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 gtgtggggcaggagtgaggacacgttcagtggtgtgcatgaccaaccacgtcagcagcct 598
Query: 355 gccgttggaaggctgtgggaacaacaggccagcggaggctacgccgtgtgacaatgggcc 414
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 597 gccgttggaaggctgtgggaacaacaggccagtggaggctacgccgtgtgacaatgggcc 538
Query: 415 ctgcacaggcaaggtggagtggttcactggcagctggagtcaggtacgtagccagagctg 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 ctgcacaggcaaggtggagtggttcactggcagctggagtcaggtacgtagccagagctg 478
Query: 475 ggtacatctgtctgttcctggaagaggcaattagcagaggggttagaagacagctttgaa 534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 ggtacatctgtctgttcctggaagaggcaattagcagaggggttagaagacagctttgaa 418
Query: 535 tctggctatgctactagctgcctgccgtgaccaggaaaagctgctatgttcttggtatat 594
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 417 tctggctatgctactagctgcctgctgtgaccaggaaaagctgctatgttcttggtatat 358
Query: 595 cattcaggcaccctttctgcgtgctcatcttggtcagcca 634
||||||||||||||||||||||||||| ||||||||||||
Sbjct: 357 cattcaggcaccctttctgcgtgctcaccttggtcagcca 318
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 634
Length of database: 1034
Length adjustment: 10
Effective length of query: 624
Effective length of database: 1024
Effective search space: 638976
Effective search space used: 638976
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no511_j18.g1 MSMg01no511_j18.g1 CHROMAT_FILE:
MSMg01no511_j18.g1 PHD_FILE: MSMg01no511_j18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:41:31 2005
(536 letters)
>mm_chr9_59708069_59709004
Length = 936
Score = 1021 bits (528), Expect = 0.0
Identities = 534/536 (99%)
Strand = Plus / Plus
Query: 1 tgtgaagctatgaacagaagaggggctggagagatggcttagcagtgcttgcagaggatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgtgaagctatgaacagaagaggggctggagagatggcttagcagtgcttgcagaggatt 260
Query: 61 caagttgggttcttagcacccacataaggtgactcacaaccttagtccacctcccgagga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caagttgggttcttagcacccacataaggtgactcacaaccttagtccacctcccgagga 320
Query: 121 taaggttctttgggcctttatgggcaacggtgctatatagtacatagatacatacagaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taaggttctttgggcctttatgggcaacggtgctatatagtacatagatacatacagaca 380
Query: 181 cacagagacacatatacagacacacgcatacacacacacatataaataaaataaatcttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cacagagacacatatacagacacacgcatacacacacacatataaataaaataaatcttg 440
Query: 241 aaaaaagttttacaaggaaaacaaaacctaaagactgttggagtaagtaaacaaaaagct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaaaaagttttacaaggaaaacaaaacctaaagactgttggagtaagtaaacaaaaagct 500
Query: 301 ttggttctttagcaaaaactgttatgccactagccagaataactggaatatatatacaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttggttctttagcaaaaactgttatgccactagccagaataactggaatatatatacaaa 560
Query: 361 gccagctatagaagagagagcatcactgcatcctctacagacattaaattaaggtcgtgc 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 561 accagctatagaagagagagcatcactgcatcctctacagacattaaattaaggttgtgc 620
Query: 421 ttcttttctggatgactttaaaagcttgtcagaatggaagaatatcagggtagagcatgg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttcttttctggatgactttaaaagcttgtcagaatggaagaatatcagggtagagcatgg 680
Query: 481 tcacataagctgtaatatgagcactctgaaggctgacataggaacatcaaaagtta 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tcacataagctgtaatatgagcactctgaaggctgacataggaacatcaaaagtta 736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 536
Length of database: 936
Length adjustment: 10
Effective length of query: 526
Effective length of database: 926
Effective search space: 487076
Effective search space used: 487076
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
