Query= MSMg01no512_e14.b1 MSMg01no512_e14.b1 CHROMAT_FILE:
MSMg01no512_e14.b1 PHD_FILE: MSMg01no512_e14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:42:23 2005
(696 letters)
>mm_chr9_24816061_24817156
Length = 1096
Score = 1294 bits (669), Expect = 0.0
Identities = 690/697 (98%), Gaps = 1/697 (0%)
Strand = Plus / Minus
Query: 1 agtgagtttagactagtaacttacattgacgttatttgaatgtgcacatatttcctcatg 60
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 839 agtgagtttagactagtaacttacattgatgttatttgaatgtgcacatatttcctcatg 780
Query: 61 acgaaagaggtaaacagcaggacagaaggagggagatgcagcaggtgagaattgagtata 120
| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 779 aagaaagaggtaaacagcaggacagaaggagggagatgcagcagatgagaattgagtata 720
Query: 121 aaaagatctgactccaagcttcaaacagcaggatggcgatttgagtcaggaaatgggtct 180
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 719 aaaagatctgactccacgcttcaaacagcaggatggcgatttgagtcaggaaatgggtct 660
Query: 181 cagtctgacaggcaaaggacaacctcaatggctgaagacagactctctcccagcgctgtc 240
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 659 cagtctgacaggcaaaggacaacctcaatggctgaagacagattctctcccagcgctgtc 600
Query: 241 agactgtgcttggctctctgacacatggagctgggaggaaagcacaaggtgatatttcaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 agactgtgcttggctctctgacacatggagctgggaggaaagcacaaggtgatatttcaa 540
Query: 301 gttatggcacccacatgaagtgaatgctcttagtattatgattcaaatccccctattttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 gttatggcacccacatgaagtgaatgctcttagtattatgattcaaatccccctattttt 480
Query: 361 gatttggattgatttctgagcaaacactgtgttttcatttgaatgcttttctgaagccac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 gatttggattgatttctgagcaaacactgtgttttcatttgaatgcttttctgaagccac 420
Query: 421 tttttccctatttgtggaaggaactatcttagttcctattttaaaaataatacttttact 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 tttttccctatttgtggaaggaactatcttagttcctattttaaaaataatacttttact 360
Query: 481 aattatttgagaatgtcacgcaatgtttttgaaagactaattaaaattaaacataattat 540
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 aattatttgagaatttcacgcaatgtttttgaaagactaattaaaattaaacataattat 300
Query: 541 atagtttcctctcttccccttctttttcctctctccagtccctttcacgtgtcctctcct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 atagtttcctctcttccccttctttttcctctctccagtccctttcacgtgtcctctcct 240
Query: 601 tgctgtctctcaaactgatagtcttttttattttactgttacatatata-ttttaagtat 659
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 239 tgctgtctctcaaactgatagtcttttttattttactgttacatatatatttttaagtat 180
Query: 660 gtaatacaacctgcttattctgaataatgttaattgt 696
|||||||||||||||||||||||||||||||||||||
Sbjct: 179 gtaatacaacctgcttattctgaataatgttaattgt 143
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 696
Length of database: 1096
Length adjustment: 10
Effective length of query: 686
Effective length of database: 1086
Effective search space: 744996
Effective search space used: 744996
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no512_e14.g1 MSMg01no512_e14.g1 CHROMAT_FILE:
MSMg01no512_e14.g1 PHD_FILE: MSMg01no512_e14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:42:23 2005
(486 letters)
>mm_chr9_24640182_24641068
Length = 887
Score = 888 bits (459), Expect = 0.0
Identities = 480/487 (98%), Gaps = 1/487 (0%)
Strand = Plus / Plus
Query: 1 taactggctttgtgaaattatgatctgtgaaacatgggtgttaggatcatcttgggtcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 taactggctttgtgaaattatgatctgtgaaacatgggtgttaggatcatcttgggtcca 260
Query: 61 gtttt-ggtttttgttttgttttgatttgattttttgtttaaaatacagattctaataat 119
||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 261 gtttttggtttttgttttgttttgatttgattttgtgtttaaaatacagattctaataat 320
Query: 120 caaagtagaacttaaaagtgtaaacagttctttgtggctgtgtcaccgccaacacaatca 179
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 321 caaagtagaacttaaaagtgtaaacagttcttcgtggctgtgtcaccgccaacacaatca 380
Query: 180 tgatcctatagctgctgtggctacctgcagtgggcctgcctatggctggacaggacagtt 239
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgatccgatagctgctgtggctacctgcagtgggcctgcctatggctggacaggacagtt 440
Query: 240 gtcactctcagatcccagctgaaccattggcttcttatggactctgaaggggcactcgct 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 441 gtcactctcagatcccagctgaaccattggcttcttatggactctgaaggggcactcact 500
Query: 300 gtcttcagtgttctgcccactgaggagcccatcaggttccaacagacagctccaatctca 359
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 501 gtcttcagtgttctgcccactgaggagctcatcaggttccaacagacagctccaatctca 560
Query: 360 cggccacactgaccactctgattagatttagggaaactcaaagtaaaacaaaagacaaga 419
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 561 cggccacactgaccactctgattagatttagtgaaactcaaagtaaaacaaaagacaaga 620
Query: 420 tgtgagtgttggaaagatacttacatggagggtgggagcatgatggaggaaaaggtattt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tgtgagtgttggaaagatacttacatggagggtgggagcatgatggaggaaaaggtattt 680
Query: 480 tagggtg 486
|||||||
Sbjct: 681 tagggtg 687
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 486
Length of database: 887
Length adjustment: 10
Effective length of query: 476
Effective length of database: 877
Effective search space: 417452
Effective search space used: 417452
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
