Query= MSMg01no516_g13.b1 MSMg01no516_g13.b1 CHROMAT_FILE:
MSMg01no516_g13.b1 PHD_FILE: MSMg01no516_g13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:48:07 2005
(587 letters)
>mm_chr9_64712908_64713894
Length = 987
Score = 1089 bits (563), Expect = 0.0
Identities = 578/583 (99%)
Strand = Plus / Plus
Query: 5 gaattcatcatttttcataactgagtagtactccattgtataaatgtaccacattttctg 64
||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcatcatttttaatagctgagtagtactccattgtataaatgtaccacattttctg 264
Query: 65 tatccattcctctgttgaaggactgggttctttccagcttctggctattataaataaggt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tatccattcctctgttgaaggactgggttctttccagcttctggctattataaataaggt 324
Query: 125 tgctatgaatgtaacacactctcttaatttgttaaattaacctcttcttaactggtcatg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tgctatgaatgtaacacactctcttaatttgttaaattaacctcttcttaactggtcatg 384
Query: 185 gttgcacatacctttaatctcagaactcagaatgcagagacaggcagatctctgtgagtt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gttgcacatacctttaatctcagaactcagaatgcagagacaggcagatctctgtgagtt 444
Query: 245 caaggccagcctggtctatgtagtgaggttgaggagagccagagctacttagtgagactc 304
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 445 caaggccagcctggtctatgtagtgaggttgaggagagccagagctactgagtgagactc 504
Query: 305 tatctcactaatatcttataatatttggtactttctttctactttgattactaattaatt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tatctcactaatatcttataatatttggtactttctttctactttgattactaattaatt 564
Query: 365 gaagagtcaaaaatgatatgagttgtttgcacttggctccgtctttaatatcagccatcc 424
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 565 gaagagtcaaaaatgatatgagttgtttgcacttggctctgtctttaatatcagccatcc 624
Query: 425 atgccttgaggggaccccacaagtgcactaaagtattctgctgtcatttatccagagttc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 atgccttgaggggaccccacaagtgcactaaagtattctgctgtcatttatccagagttc 684
Query: 485 tgaaactccaacctgaagtttgaaaaaaaaacaaattcccaatataggatttttagtttc 544
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 685 tgaaactccaacctgaagtttgaaagaaaaacaaattcccaatataggatttttagtttc 744
Query: 545 cttttcctaccccaggtacatacaataccgattaagttctgaa 587
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 cttttcctaccccaggtacatacaataccgattaagttctgaa 787
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 587
Length of database: 987
Length adjustment: 10
Effective length of query: 577
Effective length of database: 977
Effective search space: 563729
Effective search space used: 563729
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no516_g13.g1 MSMg01no516_g13.g1 CHROMAT_FILE:
MSMg01no516_g13.g1 PHD_FILE: MSMg01no516_g13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:48:08 2005
(659 letters)
>mm_chr9_64882090_64883148
Length = 1059
Score = 891 bits (461), Expect = 0.0
Identities = 464/465 (99%), Gaps = 1/465 (0%)
Strand = Plus / Minus
Query: 1 tttgggatctccaacttgtcaaaactgtgtttgtgttgataggtcttacaaaccctatgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 tttgggatctccaacttgtcaaaactgtgtttgtgttgataggtcttacaaaccctatgc 405
Query: 61 aggtcttgaatttagtcctcttgcttcagcttcctgagtgtggaaattgcagacctttgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 aggtcttgaatttagtcctcttgcttcagcttcctgagtgtggaaattgcagacctttgc 345
Query: 121 taatgagctcgaccctaagattactttttttccagaaatgtataactcaaattgcgtagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 taatgagctcgaccctaagattactttttttccagaaatgtataactcaaattgcgtagt 285
Query: 181 taagttctaacagtaggtgtaaatcttgatgtccagacacattcaagggaaaatgatagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 taagttctaacagtaggtgtaaatcttgatgtccagacacattcaagggaaaatgatagg 225
Query: 241 ttttaaaaactgcaaaagcggaccagagatggctcagcagttaagagttaataatgatat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 ttttaaaaactgcaaaagcggaccagagatggctcagcagttaagagttaataatgatat 165
Query: 301 tgcagaggccccaagtttggttctcagtagccatttctggctgctcacaaccacccataa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 164 tgcagaggccccaagtttggttctcagtagccatttctggctgctcacaaccacccataa 105
Query: 361 gaccagttctcagggggatccaatacctctggtttctatgggaactgcactcacatgcac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104 gaccagttctcagggggatccaatacctctggtttctatgggaactgcactcacatgcac 45
Query: 421 ataccctcacgcatacacacaaaccttttttaaaaaggcatatag 465
|||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 44 ataccctcacgcatacacacaaaccttttt-aaaaaggcatatag 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 659
Length of database: 1059
Length adjustment: 10
Effective length of query: 649
Effective length of database: 1049
Effective search space: 680801
Effective search space used: 680801
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
