ACCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCTTGAGGAGGTAATTAACTTCCTACACTCCCTCCAAGCTTGCTTT
GTGGGAACCTCTGTGACATTCATGTAGAGAAGACTGTAACTTCTGATTAG
CATCGTTAAAAAAAAACCAAAAACCTGCCCACTTCTTTGCTATTTTCAGA
CTCCTTTCAGACTGGGGGTGTCTTTCCAGCAGGAGTGCAAATGTTGGCGT
TGATCCCAAAAGGAAATGTGGAGTGTCAGAAGTTGAGTTGCTATTAGTCA
GCAGTGGAGTTGAGGGCAACTCTCTTAAACTCTGTGTCATCTTTTTCCCT
ATTTGTAAAACGAGGGGGCGAGGCTGTGTTTGCAAGTTTCCCCCTTTCAT
TTATGTGTAGTGATCTGAGTTTTCTCACCCAAAGGGAAAGGAGAATTATG
GGATGATCAAAGGTTCAGTAAGCTATAAATCACATTAGAAACAAAGTTAA
AACTGAGCAAGTTTGCCTGTCTAACTTTCTTTAGACTTACTGGGGTGCTA
AGACAAATTCTCCTTATGTAGCTGACATATTTAATAGCCCTATTGTGTGA
ACCTTTGCTCATGCTAATCTTTCTCCTACAGACCAATGTCTTTCTCCTTG
GTCTCAGGAAATGGTGCAGCATTGACTTGAGAAGTTGAACACTCTCAACC
CAGAAGTCATGGCATCTCAATCCTCATGAGCTTGGAGAAAATAGGATCAG
TCTAGTGCAATCC

CGATGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXCTGGACAGCCAGGGCTACACAGAGAA
ACCCTATCTCAGAAAACAAAAGACAAACAAACAAACAAACAAACCCAGAG
ATACAGGGATGGTTCAATGTAAGAAAATCTGTCAGTGTAATCCACAATAT
AAACAATCTGAAAGACACAATCATCTCATTAGGTGCTGAAAAGGTCTTTA
ACAAAATGCAATACCTCTTTATGACAAAAGTCTTGAAGAGATCAGGGATA
TAAGGGACATAACTAAACATAATTAAGGCACACATCAAGCCAATAGCCAA
CATCGAATAAAATGGAGAGAAACTCAAAGCAATTCCACTAAAATCGGGAA
CAAAACAAGGCTTTCCACTCTCTCCATATTTAGTCAATATAGTACTTACT
GTTGTAGCTAAAACAATAAAACAACTAAATAAGATCAAGAAGATTCAAAT
TGGAAAGAAAGAAGTTAAAGCATTACTATTCATAAGTAATATGATGGTAT
ATATATGTGACCCCAGAAATTCTACCAGAGAAGTCCTATAGCTGAAAAAC
ACCTTCAGCAAAGTGGCTAGAAACAAAATTACCTCATAAAGAATCAATTT
CCCTCTTATATACAAACAATAAACAGGCTGAGAAAGAAATCAGGGAAATA
ACCTCCTTCACAATAGCTACATTGTGATATATATATATATATATATATAT
ATATATATATA

Query= MSMg01no520_i14.b1 MSMg01no520_i14.b1 CHROMAT_FILE:
MSMg01no520_i14.b1 PHD_FILE: MSMg01no520_i14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:53:37 2005
         (690 letters)



>mm_chr9_23533114_23534200
          Length = 1087

 Score = 1232 bits (637), Expect = 0.0
 Identities = 674/689 (97%), Gaps = 7/689 (1%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattcttgaggaggtaattaacttcctacactccctccaagcttgctttgtgggaacc 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcttgaggaggtaattaacttcctacactccctccaagcttgctttgtgggaacc 263

                                                                       
Query: 64  tctgtgacattcatgtagagaagactgtaacttctgattagcatcgttaaaaaaaaacca 123
           ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||  |
Sbjct: 264 tctgtgatattcatgtagagaagactgtaacttctgattagcattgttaaaaaaaaa--a 321

                                                                       
Query: 124 aaaacctgcccacttctttgctattttcagactcctttcagactgggggtgtctttccag 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 aaaacctgcccacttctttgctattttcagactcctttcagactgggggtgtctttccag 381

                                                                       
Query: 184 caggagtgcaaatgttggcgttgatcccaaaaggaaatgtggagtgtcagaagttgagtt 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 caggagtgcaaatgttggcgttgatcccaaaaggaaatgtggagtgtcagaagttgagtt 441

                                                                       
Query: 244 gctattagtcagcagtggagttgagggcaactctcttaaactctgtgtcatctttttccc 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 gctattagtcagcagtggagttgagggcaactctcttaaactctgtgtcatctttttccc 501

                                                                       
Query: 304 tatttgtaaaacgagggggcgaggctgtgtttgcaagtttccccctttcatttatgtgta 363
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 502 tatttgtaaaacgagggggcgaggccgtgtttgcaagtttccccctttcatttatgtgta 561

                                                                       
Query: 364 gtgatctgagttttctcacccaaagggaaaggagaattatgggatgatcaaaggttcagt 423
           ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
Sbjct: 562 gtgatctgagttttctcacccaaggggaaaggagaattatgggatgatcaaaggttcact 621

                                                                       
Query: 424 aagctataaatcacattagaaacaaagttaaaactgagcaagtttgcctgtctaactttc 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 aagctataaatcacattagaaacaaagttaaaactgagcaagtttgcctgtctaactttc 681

                                                                       
Query: 484 tttagacttactggggtgctaagacaaattctccttatgtagctgacatatttaatagcc 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 tttagacttactggggtgctaagacaaattctccttatgtagctgacatatttaatagcc 741

                                                                       
Query: 544 ctattgtgtgaacctttgctcatgctaatctttctcctacagaccaatgtctttctcctt 603
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 ctactgtgtgaacctttgctcatgctaatctttctcctacagaccaatgtctttctcctt 801

                                                                       
Query: 604 ggtctcaggaaatggtgcagcattgacttgagaagttgaacactctcaacccagaagtca 663
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 802 ggtctcaggaaatggtgcagcattgacttgagaagttgaacactcgcaacccagaagtca 861

                                        
Query: 664 tggcatctcaat--cctcatgagcttgga 690
           ||||||||   |  | |||||||||||||
Sbjct: 862 tggcatct---tgacttcatgagcttgga 887


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 690
Length of database: 1087
Length adjustment: 10
Effective length of query: 680
Effective length of database: 1077
Effective search space:   732360
Effective search space used:   732360
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)