Query= MSMg01no521_e14.b1 MSMg01no521_e14.b1 CHROMAT_FILE:
MSMg01no521_e14.b1 PHD_FILE: MSMg01no521_e14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:54:34 2005
(658 letters)
>mm_chr9_47529285_47530342
Length = 1058
Score = 1265 bits (654), Expect = 0.0
Identities = 658/660 (99%), Gaps = 2/660 (0%)
Strand = Plus / Minus
Query: 1 gacagtatagaaaaacaaatcttaataaaattatattgatgaaataaccccaaagcttat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 995 gacagtatagaaaaacaaatcttaataaaattatattgatgaaataaccccaaagcttat 936
Query: 61 aggatcagcccttttaaaatgaatgtgactatatacgtgtatgcatatgtggct--tgtg 118
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 935 aggatcagcccttttaaaatgaatgtgactatatacgtgtatgcatatgtggcttgtgtg 876
Query: 119 tgtgtgtgtgtgtgtgttgtggtccagattgctgaggttatccgatacatagcccccacc 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 875 tgtgtgtgtgtgtgtgttgtggtccagattgctgaggttatccgatacatagcccccacc 816
Query: 179 cccacccccaggtaagcgaggcagtgctgaactccacatcactagatcctagcaagaata 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 815 cccacccccaggtaagcgaggcagtgctgaactccacatcactagatcctagcaagaata 756
Query: 239 ggaaatagtcatttaataaaagtctgaggacagagagatggtcttggatacatttcagct 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 755 ggaaatagtcatttaataaaagtctgaggacagagagatggtcttggatacatttcagct 696
Query: 299 tctgacctagaaacacatttttaaatggaggagagaaatatttcaggggacacacacatc 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 tctgacctagaaacacatttttaaatggaggagagaaatatttcaggggacacacacatc 636
Query: 359 tgcagagccttatcacttcactatgctgtgagtggctttcagaaccatctgacagcagag 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 tgcagagccttatcacttcactatgctgtgagtggctttcagaaccatctgacagcagag 576
Query: 419 gagtctattagttacacacactgtatactggaaaaacaaaccactgccaccgaacatgca 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 gagtctattagttacacacactgtatactggaaaaacaaaccactgccaccgaacatgca 516
Query: 479 tgggtcgactaatccacaatctaacgtccctagaaagtagggagaaggaccatccatcgc 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 tgggtcgactaatccacaatctaacgtccctagaaagtagggagaaggaccatccatcgc 456
Query: 539 acactctcccactttctgtgactatgcacaactgtgcctgcacttcggctctcatcacag 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 acactctcccactttctgtgactatgcacaactgtgcctgcacttcggctctcatcacag 396
Query: 599 tgccaaaggaccttagttcttaagagttcaacaagattgaatgaacatggctcatcccca 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 tgccaaaggaccttagttcttaagagttcaacaagattgaatgaacatggctcatcccca 336
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 43
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 658
Length of database: 1058
Length adjustment: 10
Effective length of query: 648
Effective length of database: 1048
Effective search space: 679104
Effective search space used: 679104
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no521_e14.g1 MSMg01no521_e14.g1 CHROMAT_FILE:
MSMg01no521_e14.g1 PHD_FILE: MSMg01no521_e14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:54:34 2005
(578 letters)
>mm_chr9_47410388_47411365
Length = 978
Score = 1112 bits (575), Expect = 0.0
Identities = 577/578 (99%)
Strand = Plus / Plus
Query: 1 ttaatcatgctaaggtccaggcagagaaactgcttttatgctttaagaaatttggtttat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttaatcatgctaaggtccaggcagagaaactgcttttatgctttaagaaatttggtttat 260
Query: 61 tagtctggtgtgctcattanacaattattgatgggcagttcaacctgtgccaggctctgg 120
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tagtctggtgtgctcattaaacaattattgatgggcagttcaacctgtgccaggctctgg 320
Query: 121 gctagatgctgaggtgccaggaggaaaaaaggtagaagctatgaccttctcatccactga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gctagatgctgaggtgccaggaggaaaaaaggtagaagctatgaccttctcatccactga 380
Query: 181 agaagacagaacccaaatgggtaataattatgcatgcattcattaattcaagacattttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agaagacagaacccaaatgggtaataattatgcatgcattcattaattcaagacattttg 440
Query: 241 gtaagcatgtaccagggtaggggaacttttgataggaaggagagggggagagataagcag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtaagcatgtaccagggtaggggaacttttgataggaaggagagggggagagataagcag 500
Query: 301 agacagacttagccctcatggtttccacagccaaggctaaatagccttcatagtatttag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agacagacttagccctcatggtttccacagccaaggctaaatagccttcatagtatttag 560
Query: 361 gactaactgtaaagtgatccatttgtcatgaaggagaaaccatgtaaagcaatcacacca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gactaactgtaaagtgatccatttgtcatgaaggagaaaccatgtaaagcaatcacacca 620
Query: 421 ggagaactggacctgcctgcgaagtcaagggagggtatcttccaggaagtcgagaagaga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ggagaactggacctgcctgcgaagtcaagggagggtatcttccaggaagtcgagaagaga 680
Query: 481 ctgtctcgtgacctccagagttagccaggttaggctggactggaagatctttctagaggg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ctgtctcgtgacctccagagttagccaggttaggctggactggaagatctttctagaggg 740
Query: 541 agccatgtgacttaaaaaaaatttctgggtcatacata 578
||||||||||||||||||||||||||||||||||||||
Sbjct: 741 agccatgtgacttaaaaaaaatttctgggtcatacata 778
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 578
Length of database: 978
Length adjustment: 10
Effective length of query: 568
Effective length of database: 968
Effective search space: 549824
Effective search space used: 549824
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
