Query= MSMg01no521_n08.b1 MSMg01no521_n08.b1 CHROMAT_FILE:
MSMg01no521_n08.b1 PHD_FILE: MSMg01no521_n08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:55:17 2005
(500 letters)
>mm_chr9_23099528_23100427
Length = 900
Score = 913 bits (472), Expect = 0.0
Identities = 493/500 (98%)
Strand = Plus / Minus
Query: 1 cacccgtctggcacctagctgtacctactgcatgccagcgtctgctagaagcatgctaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 cacccgtctggcacctagctgtacctactgcatgccagcgtctgctagaagcatgctaat 641
Query: 61 gagtctctccctgcttaccacctccctaatagctccattctctttatacagaggtgtcca 120
|||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 gagtctttccttgcttaccacctccctaatagctccattctctttatacagaggtgtcca 581
Query: 121 gagtgcacgggctcctctgtcactgattttgtgccttggagagagagactatcattgtgc 180
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 gagtgaacgggctcctctgtcactgattttgtgccttggagagagagactatcattgtgc 521
Query: 181 ttacttcacagcaacacaaagtgcctatggaacaggaaaggcccttgcctgcatccctct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 ttacttcacagcaacacaaagtgcctatggaacaggaaaggcccttgcctgcatccctct 461
Query: 241 agacctccttccctaaggaaggaagtaggaggtgggagcagaaagagaactgctgggagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 agacctccttccctaaggaaggaagtaggaggtgggagcagaaagagaactgctgggagt 401
Query: 301 gcatcccagtgacttgctttcctgcttgttgaatgaaaggacatcatgggctgtaagtga 360
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 gcatcccagagacttgctttcctgcttgttgaatgaaaggacatcatgggctgtaagtga 341
Query: 361 agagaaggcatgaaaggtgcggtgcatctttggtagggaacacacctttcctaatcctct 420
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 agagaaggcatgaaaggtgtggtgcatctttggtagggaacacacctttcctaatcctct 281
Query: 421 gtagcattccacactccagcgtctccccacttctgataatgatgtgctcatccatccccc 480
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 280 gtagcattccacactccagcatctccccacttctgataatgatgtgctcatccatccccc 221
Query: 481 ctgggttccatttatcggca 500
|||||||||||| |||||||
Sbjct: 220 ctgggttccattgatcggca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 500
Length of database: 900
Length adjustment: 10
Effective length of query: 490
Effective length of database: 890
Effective search space: 436100
Effective search space used: 436100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no521_n08.g1 MSMg01no521_n08.g1 CHROMAT_FILE:
MSMg01no521_n08.g1 PHD_FILE: MSMg01no521_n08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:55:17 2005
(595 letters)
>mm_chr9_22968392_22969387
Length = 996
Score = 1114 bits (576), Expect = 0.0
Identities = 591/596 (99%), Gaps = 1/596 (0%)
Strand = Plus / Plus
Query: 1 aaccccc-aaaacccatggtgtaagataaaaactgacagagatgagatgactgctgactg 59
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aacccccaaaaacccatggtgtaagataaaaactgacagagatgagatgactgctgactg 260
Query: 60 gggacccaaggctaggcaagaagaaacacaagatgatcaccagtctgctgccatggggcc 119
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gggacccaaggccaggcaagaagaaacacaagatgatcaccagtctgctgccatggggcc 320
Query: 120 cagacagggagcaagcctgagatagccaccagtccggtgtcctccaggctcaaacacaca 179
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 321 cagacagggagcaagcctgagatagccaccagtccggtgtcctccaggctcaatcacaca 380
Query: 180 gatcatgcccaagatggtccctgcccagtgctaaactgcataggtgaggcatagcactcc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gatcatgcccaagatggtccctgcccagtgctaaactgcataggtgaggcatagcactcc 440
Query: 240 cgacaccactcctgagacaaccccaggattctaggcaccactaagagaagcaagtaagtg 299
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cgacaccacttctgagacaaccccaggattctaggcaccactaagagaagcaagtaagtg 500
Query: 300 attgaaaaatggaagagaaagagaagcagaaggttgtgggcataatgaacagaggcagaa 359
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 501 attgaaaaatggaagagaaagagaagcagaaggttgtgggcataatgaagagaggcagaa 560
Query: 360 ctggtggcttgagggtagtgaggaacagcctgatgtcactagctcggtgataacatctaa 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctggtggcttgagggtagtgaggaacagcctgatgtcactagctcggtgataacatctaa 620
Query: 420 ggccatggtgaggtcttggcctgtgctgtcactgagaaccatgtctgctctgtgggcctg 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ggccatggtgaggtcttggcctgtgctgtcactgagaaccatgtctgctctgtgggcctg 680
Query: 480 cagaagtgggaatctgttaccaccaaaggcaaggcagatctgcctggtctgggatgctgt 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cagaagtgggaatctgttaccaccaaaggcaaggcagatctgcctggtctgggatgctgt 740
Query: 540 gcagagagggccatgttgaaatctgagagctgtgtagaactgtccacacccctcac 595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gcagagagggccatgttgaaatctgagagctgtgtagaactgtccacacccctcac 796
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 595
Length of database: 996
Length adjustment: 10
Effective length of query: 585
Effective length of database: 986
Effective search space: 576810
Effective search space used: 576810
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
