Query= MSMg01no525_i07.b1 MSMg01no525_i07.b1 CHROMAT_FILE:
MSMg01no525_i07.b1 PHD_FILE: MSMg01no525_i07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:00:10 2005
(477 letters)
>mm_chr9_29952848_29953724
Length = 877
Score = 861 bits (445), Expect = 0.0
Identities = 469/477 (98%)
Strand = Plus / Minus
Query: 1 atttgcaaggcaatgttcctctatggtagaagtggtcttaatggggaaggggttgggggc 60
|||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 677 atttgcaaagcaatgttcctctatggtagaagtggtcttagtggggaaggggttgggggc 618
Query: 61 tgagtgggatgtacatcactaacccattctctcattctgttttctgcccacagctttctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 tgagtgggatgtacatcactaacccattctctcattctgttttctgcccacagctttctc 558
Query: 121 cccttcagattcttcaaatcttagattttgtgaatagacttggtgtaaacaagtaagtaa 180
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 557 cccttcagattcttcaaatcttagattttgtgaatagacttggtgcaaacaagtaagtaa 498
Query: 181 ctggatgggttagaggcatgcctaacatgcctgtagcgttcaaacgagattcccaaacac 240
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 497 ttggatgggttagaggcatgcctaacatgcctgcagcgttcaaacgagattcccaaacac 438
Query: 241 atctcagtgtattcaggcactggactcttccacactcgtgggacaagagcttgtgatagt 300
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 437 atctcagtgtattcaggcactgtactcttccacactcgtgggacaagagcttgtgatagt 378
Query: 301 ttaagcaggagcaacgttctaaagagtggcagccaatacaggacgttgggaggagaacat 360
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 ttaagcaggagcaaagttctaaagagtggcagccaatacaggacgttgggaggagaacat 318
Query: 361 gcagcgggggtatttgtgtatgagggatacagaatacaaaggcactaccctccttcttaa 420
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 gcagcaggggtatttgtgtatgagggatacagaatacaaaggcactaccctccttcttaa 258
Query: 421 gtgcttagctattactaaggttgggagtggaatgagcagtgttttaattcctgccta 477
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 gtgcttagctattactaaggttgggagtggaatgagcagtgttttaattcctgccta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 477
Length of database: 877
Length adjustment: 10
Effective length of query: 467
Effective length of database: 867
Effective search space: 404889
Effective search space used: 404889
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no525_i07.g1 MSMg01no525_i07.g1 CHROMAT_FILE:
MSMg01no525_i07.g1 PHD_FILE: MSMg01no525_i07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:00:10 2005
(546 letters)
>mm_chr9_29802237_29803183
Length = 947
Score = 990 bits (512), Expect = 0.0
Identities = 538/547 (98%), Gaps = 1/547 (0%)
Strand = Plus / Plus
Query: 1 cagagcttttaatgtgttattgtgagttctgaatctctcaaaagtgatcataattcangg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 201 cagagcttttaatgtgttattgtgagttctgaatctctcaaaagtgatcataattcaggg 260
Query: 61 aaagttttcccaaatttgtgtgactgtagctgtttagtgttttatttctgtttggtttgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaagttttcccaaatttgtgtgactgtagctgtttagtgttttatttctgtttggtttgg 320
Query: 121 ttttgcttaccttcaatagagaaggttcttc-ggggaatatacttaaacattctttccag 179
|||||||||||||||||||||||| || || ||||||||||||||||||||||||||||
Sbjct: 321 ttttgcttaccttcaatagagaagattatttaggggaatatacttaaacattctttccag 380
Query: 180 aacctcacctccattgtgggatttttccacagaaccattgaatgggcatgtgcaatttta 239
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaccccacctccattgtgggatttttccacagaaccattgaatgggcatgtgcaatttta 440
Query: 240 tgcataggaataaacaagaggaatcggcctcatatggaatgacagctagaaatgtcaaac 299
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 441 tgcataggaataaacaagaggaatcagcctcatatggaatgacagctagaaatgtcaaac 500
Query: 300 cacctatttattttcctgtttaatcttttcagcaagccagcaaggggagtactatcatac 359
|||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 501 cacctatttattttcccgtttaatcttttcagcaagccagcaaggggagtattatcatac 560
Query: 360 taatcttacaagggaagatcctgacgttctgagatattaagggaacttcttaatagaatg 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 taatcttacaagggaagatcctgacgttctgagatattaagggaacttcttaatagaatg 620
Query: 420 cagcaggaaagctatgggtcccattgccagaggtggaaatatgtgtatgcagatttcaat 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cagcaggaaagctatgggtcccattgccagaggtggaaatatgtgtatgcagatttcaat 680
Query: 480 atagtgacatttaaacaaaaactctaggaggcaaaggagtgagccatgcatgtatctggc 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 atagtgacatttaaacaaaaactctaggaggcaaaggagtgagccatgcatgtatctggc 740
Query: 540 aaagagt 546
|||||||
Sbjct: 741 aaagagt 747
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 546
Length of database: 947
Length adjustment: 10
Effective length of query: 536
Effective length of database: 937
Effective search space: 502232
Effective search space used: 502232
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
