Query= MSMg01no526_p19.b1 MSMg01no526_p19.b1 CHROMAT_FILE:
MSMg01no526_p19.b1 PHD_FILE: MSMg01no526_p19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:02:05 2005
(610 letters)
>mm_chr9_112572177_112573186
Length = 1010
Score = 1151 bits (595), Expect = 0.0
Identities = 604/607 (99%), Gaps = 1/607 (0%)
Strand = Plus / Plus
Query: 4 ggaattccacagccaaaggaggccattctgaggagctggaggtctgggaagcctgaacaa 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattccacagccaaaggaggccattctgaggagctggaggtctgggaagcctgaacaa 263
Query: 64 cagagatatcaagcagaataaattctgacagtcttcttgtgattaattattctcatttat 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 cagagatatcaagcagaataaattctgacagtcttcttgtgattaattattctcatttat 323
Query: 124 ccatataaagggacttgaacacctcaaggggaatgatttggaaagataagaaaaagagaa 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ccatataaagggacttgaacacctcaaggggaatgatttggaaagataagaaaaagagaa 383
Query: 184 gagatgaagaattttgcatcaaacacacagggattttagtttatttttccctaagtaact 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gagatgaagaattttgcatcaaacacacagggattttagtttatttttccctaagtaact 443
Query: 244 gaaaaattttcatgcaaatggaatcttcaaaaactatggtttgttgggactggaaagatc 303
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 444 gaaaaattttcatgcaaatggaatcttcaaaaactatggttcgttgggactggaaagatc 503
Query: 304 gctcagtggttaaggctgtgtcctgtagaggttatgagttcctggcactgtgtgagatgt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gctcagtggttaaggctgtgtcctgtagaggttatgagttcctggcactgtgtgagatgt 563
Query: 364 ctcacaacttcctggaactgcagctccaggggatcagattccctcatcagggaaccttaa 423
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ctcacaactgcctggaactgcagctccaggggatcagattccctcatcagggaaccttaa 623
Query: 424 catatatgatcatacacacagagaggcatgcatactgtcacatgaataaagacagatctg 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 catatatgatcatacacacagagaggcatgcatactgtcacatgaataaagacagatctg 683
Query: 484 aaagacaagagaaaatgcagtttgttaaattgtctaatgttctaagagctaaacctctgg 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 aaagacaagagaaaatgcagtttgttaaattgtctaatgttctaagagctaaacctctgg 743
Query: 544 agtgatagatagatagatagatagatagatagatagatagatagatagatagatagatag 603
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 744 agtgatagatagatagatagatagatagatagatagatagatagatagatagat-gatag 802
Query: 604 atagata 610
|||||||
Sbjct: 803 atagata 809
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 95
Number of extensions: 31
Number of successful extensions: 31
Number of sequences better than 10.0: 1
Number of HSP's gapped: 29
Number of HSP's successfully gapped: 1
Length of query: 610
Length of database: 1010
Length adjustment: 10
Effective length of query: 600
Effective length of database: 1000
Effective search space: 600000
Effective search space used: 600000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no526_p19.g1 MSMg01no526_p19.g1 CHROMAT_FILE:
MSMg01no526_p19.g1 PHD_FILE: MSMg01no526_p19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:02:05 2005
(546 letters)
>mm_chr9_112693851_112694796
Length = 946
Score = 1033 bits (534), Expect = 0.0
Identities = 543/546 (99%)
Strand = Plus / Minus
Query: 1 tctgtaaatatccaaagttggccttgaactccatgtggctcaggtaagccatgaaattgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 tctgtaaatatccaaagttggccttgaactccatgtggctcaggtaagccatgaaattgg 687
Query: 61 ctttttttctccctcttcggcatctcaaatgaaaggagatgggtatttagccttggaaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 ctttttttctccctcttcggcatctcaaatgaaaggagatgggtatttagccttggaaag 627
Query: 121 ctttttgttgggtatcaaaacaccatagcgacatcttaaagatgcagtggaatttgatta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 ctttttgttgggtatcaaaacaccatagcgacatcttaaagatgcagtggaatttgatta 567
Query: 181 ttttacaaagggtggtgtttggacacactgggaggaaagagggccttgattataaagagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 566 ttttacaaagggtggtgtttggacacactgggaggaaagagggccttgattgtaaagagg 507
Query: 241 aaagggaccatctgacaataaggtaagcaatggccaccaccagtcaaggagaatggctgc 300
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 506 aaagggaccatctgacaataaggtgagcaatggccaccaccagtcaaggagaatggctgc 447
Query: 301 aggaggaaacaaaccagtgttcatatggggttgatcttctagcttccagagttttggaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 aggaggaaacaaaccagtgttcatatggggttgatcttctagcttccagagttttggaag 387
Query: 361 atgattttcttcttgtctctaccctcaggtctgtaatattgtgccagtgaaactttaatg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 atgattttcttcttgtctctaccctcaggtctgtaatattgtgccagtgaaactttaatg 327
Query: 421 aggaaacacacttgcatgtgtgaactcatatgaagacacaccctgttttggtgtcttatg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 aggaaacacacttgcatgtgtgaactcatatgaagacacaccctgttttggtgtcttatg 267
Query: 481 tggtttgagggatgaacaaagcacaaaagtgtgagttacagtgtagatgcgtgggcacat 540
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 266 tggtttgagggatgaacaaagcacagaagtgtgagttacagtgtagatgcgtgggcacat 207
Query: 541 gtgcca 546
||||||
Sbjct: 206 gtgcca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 546
Length of database: 946
Length adjustment: 10
Effective length of query: 536
Effective length of database: 936
Effective search space: 501696
Effective search space used: 501696
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
