Query= MSMg01no528_g24.b1 MSMg01no528_g24.b1 CHROMAT_FILE:
MSMg01no528_g24.b1 PHD_FILE: MSMg01no528_g24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:04:02 2005
(632 letters)
>mm_chr9_32738131_32739161
Length = 1031
Score = 1178 bits (609), Expect = 0.0
Identities = 624/629 (99%), Gaps = 1/629 (0%)
Strand = Plus / Plus
Query: 4 ggaattctctgtcatcactacacatacatatatgaacctttttcttgttttagtttacta 63
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctctgtcagcagtacacatacatatatgaacctttttcttgttttagtttacta 263
Query: 64 tgaagtatggctgaagctcaaaaaatgatatgatgcatatctacttagttatttcataaa 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tgaagtatggctgaagctcaaaaaatgatatgatgcatatctacttagttatttcataaa 323
Query: 124 tgtcactattgaaaaacaagaaagattcaggggaagtaattgattagatcttgaaaattg 183
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 324 tgtcactattgaaaaacaagaaagattcaggggaagtaattgattagatcttgaaacttg 383
Query: 184 gttaacactatggcagttatttttgcataatatttagaatcaggtcagagcagtctcacc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gttaacactatggcagttatttttgcataatatttagaatcaggtcagagcagtctcacc 443
Query: 244 ccaaggcacatttacatcctaagagttaagcaaacattattgctcataaagagggaaaaa 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ccaaggcacatttacatcctaagagttaagcaaacattattgctcataaagagggaaaaa 503
Query: 304 aaagtaagagcctcaaaagaatatattattttaagaaaaagatactgatatgtcttggta 363
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 aa-gtaagagcctcaaaagaatatattattttaagaaaaagatactgatatgtcttggta 562
Query: 364 aaaatattaaaatgcaattttttttccaaacagtggcttctggctttcagttggcctctt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 aaaatattaaaatgcaattttttttccaaacagtggcttctggctttcagttggcctctt 622
Query: 424 tggctgacctttctctctgcctttctatgtctccaaatatcctcataccgactcctgtaa 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 tggctgacctttctctctgcctttctatgtctccaaatatcctcataccgactcctgtaa 682
Query: 484 gctccatggtcatgttccatccctggagactgtcaaacactcccttttcactcctggctt 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 gctccatggtcatgttccatccctggagactgtcaaacactcccttttcactcctggctt 742
Query: 544 cctaaagcagcaacactttgcttggtgaaactggctgtctaggtctcatccccgctcccc 603
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 cctaaagcggcaacactttgcttggtgaaactggctgtctaggtctcatccccgctcccc 802
Query: 604 tgtggagtgactgtgtgaccttgcaagag 632
|||||||||||||||||||||||||||||
Sbjct: 803 tgtggagtgactgtgtgaccttgcaagag 831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 632
Length of database: 1031
Length adjustment: 10
Effective length of query: 622
Effective length of database: 1021
Effective search space: 635062
Effective search space used: 635062
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no528_g24.g1 MSMg01no528_g24.g1 CHROMAT_FILE:
MSMg01no528_g24.g1 PHD_FILE: MSMg01no528_g24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:04:02 2005
(559 letters)
>mm_chr9_32919013_32919971
Length = 959
Score = 986 bits (510), Expect = 0.0
Identities = 526/536 (98%), Gaps = 10/536 (1%)
Strand = Plus / Minus
Query: 1 agatgtttctgaggatggagcagctattagtctcagtaattcaagaaagttgagttagtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 agatgtttctgaggatggagcagctattagtctcagtaattcaagaaagttgagttagtg 468
Query: 61 ggtcattccaaatgattgttttgtgtgtttcaaaattctgttttctaaaattcttttgtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 ggtcattccaaatgattgttttgtgtgtttcaaaattctgttttctaaaattcttttgtc 408
Query: 121 caatttcataggctgcaaggtgcagtcttatctctggtgctttgaggctcaaacctgttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 caatttcataggctgcaaggtgcagtcttatctctggtgctttgaggctcaaacctgttc 348
Query: 181 acataggttttattgtgactaagaaaatataaaatgtgctgcaacaagttctgccatgca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 acataggttttattgtgactaagaaaatataaaatgtgctgcaacaagttctgccatgca 288
Query: 241 ctc-ttttttttccaattgatatcttttattttcttttattaaaaattgattttttttcc 299
||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 287 ctctttttttttccaattgatatcttttattttcttttattaaaaattga-tttttttcc 229
Query: 300 tggtgtgtaatatgtctttttaaaaacttttatttatttatttatttatttatttattta 359
|||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 228 tggtgtgtaatatgtctttttaaaaact--------tttatttatttatttatttattta 177
Query: 360 tttatttattttagatattttctttatatacattccaaatgctatcccgaaagttcccta 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 176 tttatttattttagatattttctttatatacattccaaatgctatcccgaaagttcccta 117
Query: 420 tgccctccctctgccctgctcccctatctacccactcccacttcttggccctggaattcc 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116 tgccctccctctgccctgctcccctatctacccactcccacttcttggccctggaattcc 57
Query: 480 cctgtactgaggcatataaagtttgcaacaccaaggggcctctcttccctgtggtg 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56 cctgtactgaggcatataaagtttgcaacaccaaggggcctctcttccctgtggtg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 48
Number of extensions: 7
Number of successful extensions: 7
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 559
Length of database: 959
Length adjustment: 10
Effective length of query: 549
Effective length of database: 949
Effective search space: 521001
Effective search space used: 521001
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
