Query= MSMg01no528_i01.b1 MSMg01no528_i01.b1 CHROMAT_FILE:
MSMg01no528_i01.b1 PHD_FILE: MSMg01no528_i01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:04:07 2005
(704 letters)
>mm_chr9_71707691_71708794
Length = 1104
Score = 1236 bits (639), Expect = 0.0
Identities = 682/697 (97%), Gaps = 3/697 (0%)
Strand = Plus / Plus
Query: 10 gaattctttttatctttatctttatttttaatatactccatagctactttcaaaattaac 69
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 gaattctttttatctttatctttatttttaatatactccatagctactttcaaaattaac 269
Query: 70 ttagagttactctgtcactgttccctttggatatcaagactgtactgcacggccccccaa 129
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 270 ttagagttactctgtcactgttccctttggatatcaagactgtactgcaccgccccccaa 329
Query: 130 catgtaaatttcaccatgcactgaagtcatatgttaaagcagggagggccatagaaatga 189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 catgtaaatttcaccatgcactgaagtcatatgttaaagcagggagggccatagaaatga 389
Query: 190 cgcacactttcaacctcttcccacctgtgaacatttctggactttaggttccctgtccct 249
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 cacacactttcaacctcttcccacctgtgaacatttctggactttaggttccctgtccct 449
Query: 250 attacagactctagaaaaacctgaaggcctgagcctaactaacagtcagtggagagagac 309
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 450 attacagactctagaaaaacctgaaggcctgagcctaactaacagtcagtggagaaagac 509
Query: 310 gaacaggataaactttcaatggagccatgggactctgtcataaagacatcttggtcaagt 369
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 taacaggataaactttcaatggagccatgggactctgtcataaagacatcttggtcaagt 569
Query: 370 ctgcccttaacacctactagtgccttcttcctatagactactgagtggcccaagaggaag 429
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 ctgcccttaacacctactagtgccttcttcctatagactactgagtggcccaagaggaag 629
Query: 430 tcttattatagggctcatgagatggctcagggtagaagttcttgccgcaaaagcctgaag 489
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 tcttattatagggctcatgagatggctcagggtagaagttcttgccgcaaaagcctgaag 689
Query: 490 acactggtcttcagatccccagcacccacgtaaagactgggtggtatgacagcagcctgt 549
|||||||| ||||||||||||||| ||| ||||| |||||||||||||||||||| |||
Sbjct: 690 acactggtgttcagatccccagcatccatataaaggctgggtggtatgacagcagcttgt 749
Query: 550 aacctcagtgcaagacagacagagggaggatccccagagtaagatagcta--tagagtgg 607
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 750 aacctcagtgcaagacagacagagggaggatccccagagtaagatagctagctagagtgg 809
Query: 608 ctggattggtaaggtctgagatcaagtgagagatcctgcctcagtatatataagccagac 667
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 810 ctggattggtaaggtctgagataaagtgagagatcctgcctcagtatatataagccagac 869
Query: 668 agggggacaccagatgctgacttctggcctatacaca 704
||||||||||||||||| ||||||||||||||||||
Sbjct: 870 -gggggacaccagatgctaacttctggcctatacaca 905
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 704
Length of database: 1104
Length adjustment: 10
Effective length of query: 694
Effective length of database: 1094
Effective search space: 759236
Effective search space used: 759236
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no528_i01.g1 MSMg01no528_i01.g1 CHROMAT_FILE:
MSMg01no528_i01.g1 PHD_FILE: MSMg01no528_i01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:04:07 2005
(659 letters)
>mm_chr9_71873321_71874379
Length = 1059
Score = 1236 bits (639), Expect = 0.0
Identities = 654/659 (99%)
Strand = Plus / Minus
Query: 1 actgatagaggttcaattgtttcatttaaaaatattaatgattttgagatgaggtttcac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1032 actgatagaggttcaattgtttcatttaaaaatattaatgattttgagatgaggtttcac 973
Query: 61 tatgtattcctggtttttctggagccagatccatttaacaggttggtcttgaagtcagag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 972 tatgtattcctggtttttctggagccagatccatttaacaggttggtcttgaagtcagag 913
Query: 121 atatctgcctgcctctgtctccctagtgctcataattaaatgcatgtctcaccgttttta 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 912 gtatctgcctgcctctgtctccctagtgctcataattaaatgcatgtctcaccgttttta 853
Query: 181 tgttttatatgatctttatttattttaaaaaacattctgcctaccctgtaaaggattttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 852 tgttttatatgatctttatttattttaaaaaacattctgcctaccctgtaaaggattttt 793
Query: 241 ataccttttcctagacagctatattatcctttctgttattacctggcttggtgattttga 300
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 792 ataccttttcctagacagctatattatcctttctgttattacctgccttggtgattttga 733
Query: 301 gaattagactgtttattatgtctattactagcccatgtcttcatactgcatttaatgagg 360
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 732 gaattagactgtttattatgtctattactagcccatgtcttcacactgcatttaatgagg 673
Query: 361 aatattattccttaatgcattctctcattcatggtcttctggattgtttccagttttagc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 aatattattccttaatgcattctctcattcatggtcttctggattgtttccagttttagc 613
Query: 421 tgttctttgcatttcttcatgaaaaagactcctgtagggcatatttttgcctttttattt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 tgttctttgcatttcttcatgaaaaagactcctgtagggcatatttttgcctttttattt 553
Query: 481 tttgaaggtataattttgtttagaatatatgaatatcttttaagaaagtgccagtttcag 540
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 552 tttgaaggtataattttgtttagaatatatgaatatcttttaagagagtgccagtttcag 493
Query: 541 aatgtatcagtttattgcccccactggcaatagttaggatttgagttgcagatcatagtt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 aatgtatcagtttattgcccccactggcaatagttaggatttgagttgcagatcatagtt 433
Query: 601 ttgtcataaattaatgctaatataagtggatttaacagtgtcctcgatgtgtttaacgt 659
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 432 ttgtcataaattaatgctaatataagtggatttaacagtgtccttgatgtgtttaacgt 374
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 659
Length of database: 1059
Length adjustment: 10
Effective length of query: 649
Effective length of database: 1049
Effective search space: 680801
Effective search space used: 680801
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
