NNNNCCTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXCGCGGAATTCTGTTTATCTCTGAGCCCCATTTTTTAATGGCGTTATTT
GATTATCTGGAGTCCACCTTCTTGAGTTCTTTATATATATATTGGATATT
AGTCCCCTATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTCTTGG
TGGCCTTTTTGCCTTATTGACAGTGTCTTTTGCCATTGATAAGTGGATAT
TAGCCCAGAAACTTAGTATAACCGAGATACAATTTGCAAAACACATGAAA
CTGAAGAAGAACGAAGACCAAAGTGTGGACACTTTGCCCCTTCTTAGAAT
TGGAAACAATCACCCATGGAAAGAGTTACAGAGACAAAGTTTGGAGCTGA
GACAAAAGGATGGACCATCTAGAGACTGACATATCCAGAGATCCATCCCA
TAATTAGCCTCCAAACGATGACACCATTGCATACACTAGCAAGATTTTGC
TGAAAGGACCCTGATATAGCTGTCCCTTGTGAAACTAGGCCAGGGCCTAG
CAAACACATAAGTAGATGCTCACAGTAAGCTGTTGGATGGAGCACAGCGC
CCCCAATGGAGGAGCTAGAGAAAGTATCCAAGGAGCTAAAGAAATCTGCA
ACCCTGTAGGTACAACAACATTATGAACTAACCAGTACCCCGGAGCCCTT
GACTCTAGCTGCCTATGTATCAATAGATGCCCTA

TTTCACGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACTACTTCTAAA
GTAAGTTTTGCCTTTCTGCCATGAAAGACAGACTTATTTAGCCATTGTCA
CACCGGTAACCACCTACTCCTTGTCCTATATTAGTGTTTACAGGTCTATC
TTCTTCACTGGTTGACCAATTAAAGAGAGCAATTTGGTTGGTATCAGACA
GCATGCAGGATAATATGTTTTGCCTACACAATAACTGGTTGTCAAATAAG
CTGATCAACATTTCTAGATTTTATTTCTGTCATCACAACACAACTGTATT
ATTTGAAAATGTCTGAGTAATCATCTTCATAAAATAAGACTGGGTTGGCA
TATTTCACTTCTCTCAGCTCAAAATAGATTGAGACACTAAGCAGAAATCA
ATGCCAGAGTTATATTAAATACATTCAATTAAAGTAAAACAACATTAATT
CATCTATTCTTTATGAAGTTGGCAAACACGCTCTTCCCACAGTGTTGAAT
TTTGGACGTGCATGTAGTTTGAATCTAGAACTAGTTTACAGAGCTGGAAG
GCATGAGGCAGCTCCCTGTGCAGATTTTCTAGATGTTCTGTCTCTCTAAA
GTTCTCAAGCGAGGAACAAAAGTAGCCTTCAGGGACCCATCATGGAATAG
CGATGGGCTGGCTGCTTGTCTGCCTATGC

Query= MSMg01no529_m01.g1 MSMg01no529_m01.g1 CHROMAT_FILE:
MSMg01no529_m01.g1 PHD_FILE: MSMg01no529_m01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:05:51 2005
         (590 letters)



>mm_chr9_81481512_81482501
          Length = 990

 Score = 1064 bits (550), Expect = 0.0
 Identities = 580/590 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   actacttctaaagtaagttttgcctttctgccatgaaagacagacttatttagccattgt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 790 actacttctaaagtaagttttgcctttctgccatgaaagacagacttatttagccattgt 731

                                                                       
Query: 61  cacaccggtaaccacctactccttgtcctatattagtgtttacaggtctatcttcttcac 120
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 cacaccggtaaccacccactccttgtcctatattagtgtttacaggtctatcttcttcac 671

                                                                       
Query: 121 tggttgaccaattaaagagagcaatttggttggtatcagacagcatgcaggataatatgt 180
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 670 tggttgaccaattaaagagagcaatttggttggtatcagacaccatgcaggataatatgt 611

                                                                       
Query: 181 tttgcctacacaataactggttgtcaaataagctgatcaacatttctagattttatttct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 tttgcctacacaataactggttgtcaaataagctgatcaacatttctagattttatttct 551

                                                                       
Query: 241 gtcatcacaacacaactgtattatttgaaaatgtctgagtaatcatcttcataaaataag 300
           ||||||||||| |||  | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 gtcatcacaactcaaaggcattatttgaaaatgtctgagtaatcatcttcataaaataag 491

                                                                       
Query: 301 actgggttggcatatttcacttctctcagctcaaaatagattgagacactaagcagaaat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 actgggttggcatatttcacttctctcagctcaaaatagattgagacactaagcagaaat 431

                                                                       
Query: 361 caatgccagagttatattaaatacattcaattaaagtaaaacaacattaattcatctatt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 caatgccagagttatattaaatacattcaattaaagtaaaacaacattaattcatctatt 371

                                                                       
Query: 421 ctttatgaagttggcaaacacgctcttcccacagtgttgaattttggacgtgcatgtagt 480
           |||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| ||
Sbjct: 370 ctttatgaagttggcaaacatgctcttcccacagtgctgaattttggacgtgcatgtggt 311

                                                                       
Query: 481 ttgaatctagaactagtttacagagctggaaggcatgaggcagctccctgtgcagatttt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 310 ttgaatctagaactagtttacagagctggaaggcatgaggcagctccctgtgcagttttt 251

                                                             
Query: 541 ctagatgttctgtctctctaaagttctcaagcgaggaacaaaagtagcct 590
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 ctagatgttctgtctctctaaagttctcaagcgaggaacaaaagtagcct 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 590
Length of database: 990
Length adjustment: 10
Effective length of query: 580
Effective length of database: 980
Effective search space:   568400
Effective search space used:   568400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)