Query= MSMg01no532_o14.b1 MSMg01no532_o14.b1 CHROMAT_FILE:
MSMg01no532_o14.b1 PHD_FILE: MSMg01no532_o14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:09:58 2005
(691 letters)
>mm_chr9_93929137_93930230
Length = 1094
Score = 1255 bits (649), Expect = 0.0
Identities = 678/689 (98%), Gaps = 3/689 (0%)
Strand = Plus / Minus
Query: 5 gaattcattctgaaggctttgaattttcttcctctccagggtttcaagtagttgtgatca 64
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 725 gaattcattctgaaggctttgaattttcttcctctccatggtttcaagtagttgtgatca 666
Query: 65 taggccagcatagccagactaagcttttataacaaagctgaaatatttgtttcataggaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 taggccagcatagccagactaagcttttataacaaagctgaaatatttgtttcataggaa 606
Query: 125 cctttacaatgatggatggcaagatttcctctatctttatgtgtaagtatggcagtgaaa 184
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 ccttttcaatgatggatggcaagatttcctctatctttatgtgtaagtatggcagtgaaa 546
Query: 185 gtaagaggaatgttcaagtgtaaaacctcatggggaaaaacactaatgatttccctgatt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 gtaagaggaatgttcaagtgtaaaacctcatggggaaaaacactaatgatttccctgatt 486
Query: 245 catcatcagaagactgttatgtaggttctggcctgtttgtgatctttcctgggttcactg 304
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 catcatcagaaaactgttatgtaggttctggcctgtttgtgatctttcctgggttcactg 426
Query: 305 ctcatccacatcatgctaagaaacactgtagtagactgttttccaccatagagtctctcc 364
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 ttcatccacatcatgctaagaaacactgtagtagactgttttccaccatagagtctctcc 366
Query: 365 acaacaacactcatgttatgataggtaacattttgaagcaca---aacaagaaacctttt 421
| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 365 ataacaacactcatgttatgataggtaacattttgaagcacaaacaacaagaaacctttt 306
Query: 422 tgtattaggatatctttatgaggtatttcatcaagggggtaagaaaaatcagtagtacag 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 tgtattaggatatctttatgaggtatttcatcaagggggtaagaaaaatcagtagtacag 246
Query: 482 acaattggtaattatcatgaggttgttgctccaatgagtctaacttgagcatggctatag 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 acaattggtaattatcatgaggttgttgctccaatgagtctaacttgagcatggctatag 186
Query: 542 tgacagtaaccggctttctgacttggaggaggaaatgtcaagacaacatcatttccaggc 601
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 185 tgacagtaaccggctttctgacttggaggaggaaatgtcaagacagcatcatttccaggc 126
Query: 602 tgtggcatcatcattgatcactaggtttggagatatttacactgagactgtggaagaaac 661
|||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 125 tgtggcatcatcattgatcactaggtttggagatatttacactgagacaggggaagaaac 66
Query: 662 aaaatacaaggatacataagatgtgtgat 690
|||||||||||||||||||||||||||||
Sbjct: 65 aaaatacaaggatacataagatgtgtgat 37
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 691
Length of database: 1094
Length adjustment: 10
Effective length of query: 681
Effective length of database: 1084
Effective search space: 738204
Effective search space used: 738204
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no532_o14.g1 MSMg01no532_o14.g1 CHROMAT_FILE:
MSMg01no532_o14.g1 PHD_FILE: MSMg01no532_o14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:09:58 2005
(633 letters)
>mm_chr9_93782623_93783655
Length = 1033
Score = 1201 bits (621), Expect = 0.0
Identities = 630/633 (99%)
Strand = Plus / Plus
Query: 1 aaggccagtctgcagaacaaaggcaaaactctttcaacggggttggagggaataaaagta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaggccagtctgcagaacaaaggcaaaactctttcaacggggttggagggaataaaagta 260
Query: 61 aggaaaagattccatgggtctttctacttttagatgtaagattatcatctatagatgtca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aggaaaagattccatgggtctttctacttttagatgtaagattatcatctatagatgtca 320
Query: 121 ttcttaggcctccaggaagagtgcaggttgccagatgctaaaagaggtggcatcttctac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttcttaggcctccaggaagagtgcaggttgccagatgctaaaagaggtggcatcttctac 380
Query: 181 caagtatcacacactccagtgaggaaatagcatgacaagacataaatgaagcatttgcaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caagtatcacacactccagtgaggaaatagcatgacaagacataaatgaagcatttgcaa 440
Query: 241 gacagtggggaatgttaaatggaagacaggagaatgtaatgtatatagggtaccgacacc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gacagtggggaatgttaaatggaagacaggagaatgtaatgtatatagggtaccgacacc 500
Query: 301 aagagtgctgagggcagaagagtggctgagcctggtgatcatatggaggtcaagggtcaa 360
|||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||
Sbjct: 501 aagagtgctgagggcagaagagtggctgagcctggtgatcgtatggagatcaagggtcaa 560
Query: 361 tggagccacaaccccatctttcctgtctcttaagaaacagcaccatcctggaggtcccag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tggagccacaaccccatctttcctgtctcttaagaaacagcaccatcctggaggtcccag 620
Query: 421 gctacttctaactggcaggcccattatcttttgttctttgtttgtttgtttgttatggta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gctacttctaactggcaggcccattatcttttgttctttgtttgtttgtttgttatggta 680
Query: 481 gttttaagaaaatgttctgagtttgagctcctgtggagagcagggaacatttgaccttct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gttttaagaaaatgttctgagtttgagctcctgtggagagcagggaacatttgaccttct 740
Query: 541 gaagtgtccccactggtgaccggaacttgctgtctcataactataatcactatggacagt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gaagtgtccccactggtgaccggaacttgctgtctcataactataatcactatggacagt 800
Query: 601 gtttgctctttatttgacaataatccctacacc 633
||| |||||||||||||||||||||||||||||
Sbjct: 801 gttggctctttatttgacaataatccctacacc 833
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 633
Length of database: 1033
Length adjustment: 10
Effective length of query: 623
Effective length of database: 1023
Effective search space: 637329
Effective search space used: 637329
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
