Query= MSMg01no534_d02.b1 MSMg01no534_d02.b1 CHROMAT_FILE:
MSMg01no534_d02.b1 PHD_FILE: MSMg01no534_d02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:11:36 2005
(189 letters)
>mm_chr9_65633987_65634575
Length = 589
Score = 339 bits (175), Expect = 9e-98
Identities = 181/183 (98%)
Strand = Plus / Minus
Query: 4 ggaattctttcttgttcttgaatcttcatggccagtggtacctttttgacctcggaaagg 63
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 386 ggaattctttcttgttcttgaatcttcatggccagtggtacctttttgaactcggaaagg 327
Query: 64 aaaggaagagagggtgggaaatcccttaacctttagaccctggaagtattttttaaaccc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 aaaggaagagagggtgggaaatcccttaacctttagaccctggaagtattttttaaaccc 267
Query: 124 ttagtgtttttcttttgaaagtactctatggaacagttccacatgaagtgctaactaagg 183
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 266 ttagtgtttttcttttgaaagtactctatcgaacagttccacatgaagtgctaactaagg 207
Query: 184 tga 186
|||
Sbjct: 206 tga 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 189
Length of database: 589
Length adjustment: 8
Effective length of query: 181
Effective length of database: 581
Effective search space: 105161
Effective search space used: 105161
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no534_d02.g1 MSMg01no534_d02.g1 CHROMAT_FILE:
MSMg01no534_d02.g1 PHD_FILE: MSMg01no534_d02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:11:37 2005
(417 letters)
>mm_chr9_65497283_65498099
Length = 817
Score = 752 bits (389), Expect = 0.0
Identities = 412/423 (97%), Gaps = 6/423 (1%)
Strand = Plus / Plus
Query: 1 ttgagatttgatgtagccttttttttttttttttt------ctgaggaaactggataagg 54
||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 195 ttgagatttgatgtagcctttttttttttttttttttttttctgaggaaactggataagg 254
Query: 55 gacttgctctcaaatggcatgtcagtagagccctgggaatgccctgggcactgctgtacc 114
||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||
Sbjct: 255 gacttgctctcaaatggcaagttagtagagccctgggaatgccctgggcactgctgtacc 314
Query: 115 atgtgattcagaacacttaaggcctcaggaactcagcctcaatgtgagggttgcctttgg 174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 atgtgattcagaacacttaaggcctcaggaactcagcctcaatgtgagggttgcctttgg 374
Query: 175 aggattacagaatgcttcaggggatcactgaggaaagatgaggctgatgggggagacagt 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 aggattacagaatgcttcaggggatcactgaggaaagatgaggctgatgggggagacagt 434
Query: 235 gctgggttagtatagcaacagcttctgaccccctgaaatggccacctctctccacagggc 294
|||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 gctgggttagcacagcaacagcttctgaccccctgaaatggccacctctctccacagggc 494
Query: 295 tatgaagggtccctgatcaagctcacctcaagacaggtaatttctcttctaggtttttcc 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 tatgaagggtccctgatcaagctcacctcaagacaggtaatttctcttctaggtttttcc 554
Query: 355 tctcagctcaggctaactgctggcatggaactgaaacgtttgtcctactgcttgaaggca 414
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 tctcagctcaggttaactgctggcatggaactgaaacgtttgtcctactgcttgaaggca 614
Query: 415 tct 417
|||
Sbjct: 615 tct 617
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 417
Length of database: 817
Length adjustment: 9
Effective length of query: 408
Effective length of database: 808
Effective search space: 329664
Effective search space used: 329664
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
