AAAAAATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXCGCGGAATTCCCAAGATATTGTCCAGAGATTTCAAAAGGCTCCACAAC
CTGAAGTGCCCAAGTGAGGATGCCTCAGTCCCACTTGGGAGAGAGAAGAA
AGCAATCACAAGTGGGGAAGGTGGGAGGGCCTTGGGAGATAATGTGGATG
GAGTGGAGGGCAGTGGGGATAAAGGAGAACCTGATCTGATGTTGGTTGCA
GGAAAAGGATGGAAGCCATGAGGGCCAGCTTAAAGAATATACTCTGGCAA
CCTCTGGAAATAGGAGGTTGAATGGACCCCCCCCCTTATTATTCCTCATA
GACTTGGGAGGTGATAGGCTCCCTTGACTCCTAGGGAGGGACTTCTGATG
AAATTCCTGATCCTTGTTACACCGTTGACCTATTGGTTAACTCTTTTCTG
ACTACCCCACTTCATGCCGTGTCCCGTTTTTGTCTTTCCTCTTCTTTCTT
CCTACCCCTACTTCGTTACTGTCTTATCGCACTTCCGGCTCGTTTTTTTC
TACCTTTCCCCTTTTCCACATGTATTCTCACCTCCCCGTTCTTCTATACT
GTATTGATCCTCCCGGCCATTTCCCTTCCTTCTTGTCTTTTTCCCCTTTT
TTCCCCTTCCCTTTCTCTTTCTTCTGTTCTTTCCATTTGCTTTCCCTTCC
CTTCCCTTTTTTCCTTGTTCTTACCATTTTCTGTCCCCTTTTTTTCCTTC
TTTCTCCCCCATTTTTTCACCAATTTTGCCCTCTTTTTTTCTTCCTTTG

TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXTTGTCCTGGCATTCCCCTACAATGAGGCATCAAGC
CTTCCAGGACTAAGGGCCTCTCCTTCCATTGATGCCCGACAAGGCCATTC
TCTGCTACATATGAGGCTGGAGCTATGGCTCCATGTGTACTCTTTGGTTG
GTGGTTTAGTCCCTTGGAGCTCTGGGGGAGGAGTCTGGTTGGTCGATATT
GTTGCATATGGTTGATATTGGGTTGCAAATCCCTTCATCTCTTTCAGTCA
ATGGAGGAGTTAGAGAAAGGATTTTTATAAAAAAAGATGTACACAATGGT
ACTGTGTTGCTTCATCAGATTTGATGAGGTGCAGTCATACTATAGGGACA
ATCAACTTTCAACATTTGTACCTTTATAGCTTCTTTTATTTTGACTCACT
GTACAGGTAGTGATTTGTATGGCCAGTTTCTAAAAATACTCATTAGCCAA
GTCATATTGACCAGTGGTTGTGGTGCCTCTTGAGTCTCCTCGCTATAAAT
CGAAACAAAAGATAGAGTGTATGTGTGCACTACCACATTATCCTCATGCC
TCCTCCTCAGACATCCTTATCTTTATCCTACAACTTACTCCTTTTAGTCC
CTTGACTCATCAAATATTCTTGTACCTTTCCCATTGCACTGTTTTTGGAC
ACTCATTTAAGGGAACTCATTTTTCATAAAAAGTATTCCCGCTTTCCATG
CN

Query= MSMg01no536_l04.g1 MSMg01no536_l04.g1 CHROMAT_FILE:
MSMg01no536_l04.g1 PHD_FILE: MSMg01no536_l04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:14:53 2005
         (584 letters)



>mm_chr9_35566378_35567361
          Length = 984

 Score = 1098 bits (568), Expect = 0.0
 Identities = 580/584 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttgtcctggcattcccctacaatgaggcatcaagccttccaggactaagggcctctcctt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttgtcctggcattcccctacaatgaggcatcaagccttccaggactaagggcctctcctt 260

                                                                       
Query: 61  ccattgatgcccgacaaggccattctctgctacatatgaggctggagctatggctccatg 120
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 261 ccattgatgcccgacaaggccattctctgctacatatgaggctggggctatggctccatg 320

                                                                       
Query: 121 tgtactctttggttggtggtttagtcccttggagctctgggggaggagtctggttggtcg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgtactctttggttggtggtttagtcccttggagctctgggggaggagtctggttggtcg 380

                                                                       
Query: 181 atattgttgcatatggttgatattgggttgcaaatcccttcatctctttcagtcaatgga 240
           ||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||
Sbjct: 381 atattgttgcatatggttgatattgggctgcaaatcccttcatctccttcagtcaatgga 440

                                                                       
Query: 241 ggagttagagaaaggatttttataaaaaaagatgtacacaatggtactgtgttgcttcat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggagttagagaaaggatttttataaaaaaagatgtacacaatggtactgtgttgcttcat 500

                                                                       
Query: 301 cagatttgatgaggtgcagtcatactatagggacaatcaactttcaacatttgtaccttt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cagatttgatgaggtgcagtcatactatagggacaatcaactttcaacatttgtaccttt 560

                                                                       
Query: 361 atagcttcttttattttgactcactgtacaggtagtgatttgtatggccagtttctaaaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atagcttcttttattttgactcactgtacaggtagtgatttgtatggccagtttctaaaa 620

                                                                       
Query: 421 atactcattagccaagtcatattgaccagtggttgtggtgcctcttgagtctcctcgcta 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atactcattagccaagtcatattgaccagtggttgtggtgcctcttgagtctcctcgcta 680

                                                                       
Query: 481 taaatcgaaacaaaagatagagtgtatgtgtgcactaccacattatcctcatgcctcctc 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 taaatcgaaacaaaagatagagtgtatgtgtgcactaccacattatcctcatgcctcctc 740

                                                       
Query: 541 ctcagacatccttatctttatcctacaacttactccttttagtc 584
           ||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 741 ctcagacatccttatatttatcctacaacttactccttttagtc 784


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 584
Length of database: 984
Length adjustment: 10
Effective length of query: 574
Effective length of database: 974
Effective search space:   559076
Effective search space used:   559076
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)