NNNNTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCTTAAATCCCTGAGGCAGTCTCGTCCACGTGAGCTGCCTG
GTTCTTCTGTTCTCTGGGTCTCGCCATTCAAAGGCAAACAAGGGCTGGCT
GTTAGGGTGTAGTCTCAGGCAAAAGAAAGCATCTTTAAGATCTAAGACCA
TATACCAGGTTTGTCCGGGTGGCAGCGTGCTGAGCAGGTTGTAAGGATTG
GGCACTGTGGGGTGGATATCTTGAACTCTTATTGACCTCTCTAAGGTCCT
GTATGGGGCGATAGTCATTTGTCCCCAGTTTCTTTACCAGGAGTAGGGGG
GTATTCTAAGGAGACGTACATGGGACTAGGATCCCCTGTTGGAGCATGGG
ACTAGGATCCCCTGTCTGGTGATATGGCGGTGTATGCCCTCCTGTGCTTC
TCTGCCCATGGGATACTGTCGGACCCCAATGGGAATGGCCCCAGACTTAA
GCTCAGTCACCACCAGGGGAACTAGTCTCACCATTTCCATTCTCCCTGTT
TTGGCCCATGCCTGAGGAAATTGAGTAAGCCAGTCCTATAGTCCCTCAGG
GGGTTTCATTCTATTTTGATAAATCTGATACTCTTCTCTTAATTGTAAAG
ACAACACTAAGGTCTGAGATGTCTCAGTCCCCCAGGACAATTCTGGTGCA
GAGGGGCAAATGTTATTTATGCCTTTAATTTGGTTAATAAGTCTCTTCC

NCCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXCTTGGGGTAGTGCAAAAGAAATAA
CTCAAAGCTTGGGGTGGAGGGTAAGAAGGTTGGAGAGTGGGGGAGCCTCA
ATCCTTGGATTTTATTATCAACGCTGTGGGGATGGGGCTAGGGCACCCTG
CCACCCCTCTGGCCTTGGATCTGGAAAGACTCTAGGTCATTAGATTACTT
CCCCAGCCCAGCACAGAGTGAAACTTATGTAAATAAAAATCTGTGTCATG
CGTGGAAAACAAAGAACCTTGGAGTGAACTCTGAACTGACACCAAGATCT
TGAGAGACACTGGGAAGAACAATCCAGCTTCTACCCCAGCTCCTTTCCAA
TGGGACAAAACCCATGATGCACCACTGGCAGAGGTCAGGCTGCAGGCAAG
ATGAGCAGCATTACAGATGCAGGTAGCAGGGGAAATGTGGTTCTCAGTGT
GGTCTAACCCATGAGAACTGGCAGCCCTCTGTGGTCTACAGGCTCCCTAC
AAGCAAATTGTCCTGTGAAACAGCTCAGTGTGAGGGCACTGGAGAACTAA
AGGCAGGAGGATTGGGAATTCAAAGCCTAGGCTACACAAAGATATATAAG
ACCACTATTCAAACTCAAACCAACCAACTACAGCCACCACAACAAAATAC
CCCAAACCACTCTAATTTCAAACCAAGGCCCATGCACAGCTTCAGCTGTT
GCCCATCGGCCC

Query= MSMg01no541_j15.g1 MSMg01no541_j15.g1 CHROMAT_FILE:
MSMg01no541_j15.g1 PHD_FILE: MSMg01no541_j15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:21:19 2005
         (666 letters)



>mm_chr9_7925505_7926570
          Length = 1066

 Score = 1137 bits (588), Expect = 0.0
 Identities = 633/666 (95%), Gaps = 28/666 (4%)
 Strand = Plus / Plus

                                                                       
Query: 1   cttggggtagtgcaaaagaaataactcaaagcttggggtggagggtaagaaggttggaga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 cttggggtagtgcaaaagaaataactcaaagcttggggtggagggtaagaaggttggaga 288

                                                                       
Query: 61  gtgggggagcctcaatccttggattttattatcaacgctgtggggatggggctagggcac 120
           ||||||||||                            ||||||||||||||||||||||
Sbjct: 289 gtgggggagc----------------------------tgtggggatggggctagggcac 320

                                                                       
Query: 121 cctgccacccctctggccttggatctggaaagactctaggtcattagattacttccccag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cctgccacccctctggccttggatctggaaagactctaggtcattagattacttccccag 380

                                                                       
Query: 181 cccagcacagagtgaaacttatgtaaataaaaatctgtgtcatgcgtggaaaacaaagaa 240
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 381 cccagcacagagtgaaacttatgtaaatagaaatctgtgtcatgcgtggaaaacaaagaa 440

                                                                       
Query: 241 ccttggagtgaactctgaactgacaccaagatcttgagagacactgggaagaacaatcca 300
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccttggagtgaactttgaactgacaccaagatcttgagagacactgggaagaacaatcca 500

                                                                       
Query: 301 gcttctaccccagctcctttccaatgggacaaaacccatgatgcaccactggcagaggtc 360
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gcttctaccccagttcctttccaatgggacaaaacccatgatgcaccactggcagaggtc 560

                                                                       
Query: 361 aggctgcaggcaagatgagcagcattacagatgcaggtagcaggggaaatgtggttctca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aggctgcaggcaagatgagcagcattacagatgcaggtagcaggggaaatgtggttctca 620

                                                                       
Query: 421 gtgtggtctaacccatgagaactggcagccctctgtggtctacaggctccctacaagcaa 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gtgtggtctaacccatgagaactggcagccctctgtggtctacaggctccctacaagcaa 680

                                                                       
Query: 481 attgtcctgtgaaacagctcagtgtgagggcactggagaactaaaggcaggaggattggg 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 attgtcctgtgaaacagctcagtgtgagggcactggagaactaaaggcaggaggattggg 740

                                                                       
Query: 541 aattcaaagcctaggctacacaaagatatataagaccactattcaaactcaaaccaacca 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 aattcaaagcctaggctacacaaagatatataagaccactattcaaactcaaaccaacca 800

                                                                       
Query: 601 actacagccaccacaacaaaataccccaaaccactctaatttcaaaccaaggcccatgca 660
           |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 801 actatagccaccacaacaaaataccccaaaccactctaattttaaaccaaggcccatgca 860

                 
Query: 661 cagctt 666
           ||||||
Sbjct: 861 cagctt 866


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 666
Length of database: 1066
Length adjustment: 10
Effective length of query: 656
Effective length of database: 1056
Effective search space:   692736
Effective search space used:   692736
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)