Query= MSMg01no544_a18.b1 MSMg01no544_a18.b1 CHROMAT_FILE:
MSMg01no544_a18.b1 PHD_FILE: MSMg01no544_a18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:24:35 2005
(588 letters)
>mm_chr9_111586332_111587319
Length = 988
Score = 1091 bits (564), Expect = 0.0
Identities = 576/580 (99%), Gaps = 1/580 (0%)
Strand = Plus / Plus
Query: 10 gaattcaagggcatcttggactaagccaacctggatctacatagtttgacccatctagac 69
|||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 gaattcaaaggcatcttgaactaagccaacctggatctacatagtttgacccatctagac 269
Query: 70 aacaataaaacccaaacagtaataacagacaaaacaactacaaaataaagcagcagactt 129
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 270 aacaataaaacccaaacagtaataacagacaaagcaactacaaaataaagcagcagactt 329
Query: 130 gccaaggagggattctgtcctttagagatggagagcccagtactctggtttgcttcttgg 189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 gccaaggagggattctgtcctttagagatggagagcccagtactctggtttgcttcttgg 389
Query: 190 ttgctgtgataaaaa-cactgaataaaagcaatgttgggcaggaaatggaatatttgttt 248
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 ttgctgtgataaaaaacactgaataaaagcaatgttgggcaggaaatggaatatttgttt 449
Query: 249 tacagctcacagtctatcattagaggaagccaagaaaggaactgaatcagagaccatgga 308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 tacagctcacagtctatcattagaggaagccaagaaaggaactgaatcagagaccatgga 509
Query: 309 ggaacactgtttctgtacggtttctgctggctgattcagacagctttattgtattggcca 368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 ggaacactgtttctgtacggtttctgctggctgattcagacagctttattgtattggcca 569
Query: 369 ggccagcctgcctagggatagcaccactcaccaatgggctggaccaattagtgattaaga 428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 ggccagcctgcctagggatagcaccactcaccaatgggctggaccaattagtgattaaga 629
Query: 429 caatgccccacaaacatggccacaggccactcagatctgagcagttatttagctagggtt 488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 caatgccccacaaacatggccacaggccactcagatctgagcagttatttagctagggtt 689
Query: 489 ccctcttctcagttgactttagttttatttttagttgacaaatgaagcgaatggtgacac 548
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 ccctcttctcagttgactttagttttatttttagttgacaaatgaagcgaatggtgacac 749
Query: 549 ccagggttggagataatgggccaacttgcttatagtcaga 588
||||||||||||||||||||||||||||||||||||||||
Sbjct: 750 ccagggttggagataatgggccaacttgcttatagtcaga 789
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 588
Length of database: 988
Length adjustment: 10
Effective length of query: 578
Effective length of database: 978
Effective search space: 565284
Effective search space used: 565284
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no544_a18.g1 MSMg01no544_a18.g1 CHROMAT_FILE:
MSMg01no544_a18.g1 PHD_FILE: MSMg01no544_a18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:24:35 2005
(172 letters)
>mm_chr9_111771626_111772197
Length = 572
Score = 255 bits (132), Expect = 8e-73
Identities = 152/166 (91%), Gaps = 12/166 (7%)
Strand = Plus / Minus
Query: 5 agcaactgttacaaaataaagttctcatgattagggtacggcaaacctaagtctgtgttc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct: 306 agcaactgttacaaaataaagttctcatgattagggtacggcaaacctaagtctgggtcc 247
Query: 65 tacctgccctatgatgttaaaaccccattattgctgctcatctgtgtgtgtgtgtgtgtg 124
|||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 246 tacctgccctatgatgttaaaaccccattattgctgctcatc------------tgtgtg 199
Query: 125 tgtgtgtgtgtgtgtgtgtgtgttctgagtgggtgtggtatggtgt 170
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 tgtgtgtgtgtgtgtgtgtgtgttctgagtgggtgtggtatggtgt 153
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 7
Number of successful extensions: 7
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 172
Length of database: 572
Length adjustment: 8
Effective length of query: 164
Effective length of database: 564
Effective search space: 92496
Effective search space used: 92496
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
