Name Type Link Xref Definition Chrm. Start (b.p.) End (b.p.) Orient to Chrm. Map View
Sequence Manipulation
1
source
taxon:10090
chromosome : 16
mol_type : genomic DNA
organism : Mus musculus
strain : C57BL/6J
16
1
98,319,150
plus
2
gap
estimated_length : 3000000
16
1
3,000,000
plus
3
gap
estimated_length : 40000
16
65,254,924
65,294,923
plus
4
LOC100042177
gene
vega ensembl
GeneID:100042177
note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs
16
3,098,752
3,108,551
minus
5
LOC100042177
mRNA
vega ensembl NCBI
GI:149267265
GeneID:100042177
note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs
product : similar to pol protein
transcript_id : XM_001477689.1
16
3,098,752
3,108,551
minus
6
LOC100042177
CDS
vega ensembl NCBI
GI:149267266
GeneID:100042177
codon_start : 1
product : similar to pol protein
protein_id : XP_001477739.1
16
3,101,149
3,108,551
minus
7
LOC100042915
gene
vega ensembl
GeneID:100042915
note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins
pseudo : _no_value
16
3,161,221
3,162,048
minus
8
LOC100042915
exon
vega ensembl
GeneID:100042915
number : 1
pseudo : _no_value
16
3,161,221
3,162,048
minus
9
LOC100042188
gene
vega ensembl
GeneID:100042188
note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 1 Protein
pseudo : _no_value
16
3,164,111
3,165,024
minus
10
LOC100042188
misc_RNA
vega ensembl NCBI
GI:149267267
GeneID:100042188
note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 1 Protein
product : similar to Zbed4 protein
pseudo : _no_value
transcript_id : XR_033357.1
16
3,164,111
3,165,024
minus
11
LOC100042251
gene
vega ensembl
GeneID:100042251
note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein
pseudo : _no_value
16
3,301,413
3,301,996
plus
12
LOC100042251
exon
vega ensembl
GeneID:100042251
number : 1
pseudo : _no_value
16
3,301,413
3,301,996
plus
13
LOC100042925
gene
vega ensembl
GeneID:100042925
note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins
pseudo : _no_value
16
3,304,390
3,305,217
plus
14
LOC100042925
exon
vega ensembl
GeneID:100042925
number : 1
pseudo : _no_value
16
3,304,390
3,305,217
plus
15
LOC100042270
gene
vega ensembl
GeneID:100042270
note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 12 Proteins
16
3,515,982
3,522,164
plus
16
LOC100042270
mRNA
vega ensembl NCBI
GI:149267268
GeneID:100042270
note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 12 Proteins
product : similar to Unknown (protein for MGC:41421)
transcript_id : XM_001477847.1
16
3,515,982
3,522,164
plus
17
LOC100042270
CDS
vega ensembl NCBI
GI:149267269
GeneID:100042270
codon_start : 1
product : hypothetical protein
protein_id : XP_001477897.1
16
3,515,982
3,522,164
plus
18
LOC100042937
gene
vega ensembl
GeneID:100042937
note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 4 Proteins
pseudo : _no_value
16
3,534,391
3,535,029
plus
19
LOC100042937
misc_RNA
vega ensembl NCBI
GI:149267292
GeneID:100042937
note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 4 Proteins
product : similar to synaptojanin 2 binding protein
pseudo : _no_value
transcript_id : XR_034413.1
16
3,534,391
3,535,029
plus
20
LOC100042283
gene
vega ensembl
GeneID:100042283
note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins
pseudo : _no_value
16
3,563,853
3,564,342
plus