Name Type Link Xref Definition Chrm. Start End Orient Map View
Sequence
1
source
taxon:10090
chromosome : 3mol_type : genomic DNAorganism : Mus musculusstrain : C57BL/6J
3
1
159,599,783
plus
2
gap
estimated_length : 3000000
3
1
3,000,000
plus
3
gap
estimated_length : 50000
3
15,610,691
15,660,690
plus
4
gap
estimated_length : 5000
3
40,449,540
40,454,539
plus
5
gap
estimated_length : 50000
3
50,567,648
50,617,647
plus
6
gap
estimated_length : 50000
3
131,076,437
131,126,436
plus
7
LOC667655
gene
vega ensembl
GeneID:667655
note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Proteinpseudo : _no_value
3
3,266,250
3,309,286
minus
8
LOC667655
exon
vega ensembl
GeneID:667655
number : 2pseudo : _no_value
3
3,266,250
3,266,899
minus
9
LOC667655
exon
vega ensembl
GeneID:667655
number : 1pseudo : _no_value
3
3,309,044
3,309,286
minus
10
LOC100039140
gene
vega ensembl
GeneID:100039140
note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Proteinpseudo : _no_value
3
3,452,523
3,455,526
plus
11
LOC100039140
exon
vega ensembl
GeneID:100039140
number : 1pseudo : _no_value
3
3,452,523
3,452,536
plus
12
LOC100039140
exon
vega ensembl
GeneID:100039140
number : 2pseudo : _no_value
3
3,455,198
3,455,526
plus
13
Hnf4g
gene
vega ensembl MGI
GeneID:30942MGI:1353604
note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
3
3,508,102
3,657,374
plus
14
Hnf4g
mRNA
vega ensembl MGI NCBI
GI:7305146 MGI:1353604
exception : unclassified transcription discrepancynote : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNAproduct : hepatocyte nuclear factor 4, gammatranscript_id : NM_013920.1
3
3,508,102
3,657,374
plus
15
Hnf4g
CDS
vega ensembl MGI NCBI
GI:7305147 MGI:1353604
GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence ISS]GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0004879 - ligand-dependent nuclear receptor activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0005496 - steroid binding [Evidence IEA]; GO:0003707 - steroid hormone receptor activity [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA]; GO:0016563 - transcriptional activator activity [Evidence IDA]; GO:0008270 - zinc ion binding [Evidence IEA]GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA]; GO:0006366 - transcription from RNA polymerase II promoter [Evidence IDA]codon_start : 1function : transcription factorproduct : hepatocyte nuclear factor 4, gammaprotein_id : NP_038948.1
3
3,508,329
3,657,176
plus
16
EG383815
gene
vega ensembl MGI
GeneID:383815MGI:3649025
note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 72 ESTs, 7 Proteins
3
3,791,897
3,792,371
plus
17
EG383815
mRNA
vega ensembl MGI NCBI
GI:94369198 MGI:3649025
note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 72 ESTs, 7 Proteinsproduct : predicted gene, EG383815transcript_id : XM_357274.5
3
3,791,897
3,792,371
plus
18
EG383815
CDS
vega ensembl MGI NCBI
GI:38076180 MGI:3649025
codon_start : 1product : hypothetical proteinprotein_id : XP_357274.1
3
3,791,897
3,792,295
plus
19
LOC100039157
gene
vega ensembl
GeneID:100039157
note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteinspseudo : _no_value
3
3,829,013
3,830,084
plus
20
LOC100039157
exon
vega ensembl
GeneID:100039157
number : 1pseudo : _no_value
3
3,829,013
3,830,084
plus
