Name Type Link Xref Definition Chrm. Start (b.p.) End (b.p.) Orient to Chrm. Map View
Sequence Manipulation
1
source
taxon:10090
chromosome : 9
mol_type : genomic DNA
organism : Mus musculus
strain : C57BL/6J
9
1
124,076,172
plus
2
gap
estimated_length : 3000000
9
1
3,000,000
plus
3
gap
estimated_length : 50000
9
13,167,524
13,217,523
plus
4
gap
estimated_length : 50000
9
53,529,417
53,579,416
plus
5
gap
estimated_length : 72000
9
80,256,171
80,328,170
plus
6
gap
estimated_length : 5000
9
100,989,278
100,994,277
plus
7
gap
estimated_length : 50000
9
108,764,475
108,814,474
plus
8
gap
estimated_length : 50000
9
123,782,329
123,832,328
plus
9
4930433N12Rik
gene
vega ensembl MGI
GeneID:114673
MGI:2149746
note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST
9
3,133,847
3,199,802
minus
10
4930433N12Rik
misc_RNA
vega ensembl MGI NCBI
GI:149259436
GeneID:114673
MGI:2149746
note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST
product : RIKEN cDNA 4930433N12 gene
transcript_id : XR_035187.1
9
3,133,847
3,199,802
minus
11
LOC664797
gene
vega ensembl
GeneID:664797
note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins
pseudo : _no_value
9
3,186,884
3,188,334
plus
12
LOC664797
exon
vega ensembl
GeneID:664797
number : 1
pseudo : _no_value
9
3,186,884
3,188,334
plus
13
Olfr369-ps1
gene
vega ensembl MGI
GeneID:404381
MGI:3030203
note : olfactory receptor 369, pseudogene 1
pseudo : _no_value
9
3,233,343
3,236,366
plus
14
Alkbh8
gene
vega ensembl MGI
GeneID:67667
MGI:1914917
note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
9
3,335,231
3,385,847
plus
15
Alkbh8
mRNA
vega ensembl MGI NCBI
GI:61675695
GeneID:67667
MGI:1914917
exception : unclassified transcription discrepancy
note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
product : alkB, alkylation repair homolog 8 (E. coli)
transcript_id : NM_026303.1
9
3,335,231
3,385,847
plus
16
Alkbh8
CDS
vega ensembl MGI NCBI
GI:61675696
CCDS:CCDS22792.1
GeneID:67667
MGI:1914917
GO_function : GO:0005506 - iron ion binding [Evidence IEA]; GO:0008168 - methyltransferase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]
codon_start : 1
product : alkB, alkylation repair homolog 8
protein_id : NP_080579.1
9
3,338,463
3,385,599
plus
17
Cwf19l2
gene
vega ensembl MGI
GeneID:244672
MGI:1918023
note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
9
3,404,085
3,479,236
plus
18
Cwf19l2
mRNA
vega ensembl MGI NCBI
GI:141802808
GeneID:244672
MGI:1918023
note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
product : CWF19-like 2, cell cycle control (S. pombe)
transcript_id : NM_027545.2
9
3,404,085
3,479,236
plus
19
Cwf19l2
CDS
vega ensembl MGI NCBI
GI:30842792
CCDS:CCDS22793.1
GeneID:244672
MGI:1918023
GO_component : GO:0005575 - cellular_component [Evidence ND]
GO_function : GO:0003674 - molecular_function [Evidence ND]
GO_process : GO:0008150 - biological_process [Evidence ND]
codon_start : 1
product : CWF19-like 2, cell cycle control
protein_id : NP_081821.1
9
3,404,098
3,477,960
plus
20
LOC384911
gene
vega ensembl
GeneID:384911
note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins
pseudo : _no_value
9
3,494,531
3,497,471
minus