MoG+ -Mouse Genome database with high added value-

Target CDS Information

Gene Symbol (Gene ID)

N4bp2l1 (ENSMUSG00000041132)

Cross Reference

CCDS	CCDS19887.1
EMBL	AK046116, AK131647, AK138666, ...show all
Fantom	1520402E19, A330097D18, B230342M21
GO	GO:0003674, GO:0005575, GO:0008150
goslim_goa	GO:0003674, GO:0005575, GO:0008150
MGI_trans_name	N4bp2l1-001
OTTP	OTTMUSP00000072387
OTTT	OTTMUST00000137442
protein_id	AAH19754.1, BAC32606.1, BAE20739.1, ...show all
RefSeq_mRNA	NM_133898.4

RefSeq_peptide	NP_598659
UCSC	uc009auc.2
UniParc	UPI0000021463
Uniprot/SWISSPROT	Q3V2Q8
Vega_transcript	N4bp2l1-001, OTTMUST00000137442
Vega_translation	196425, OTTMUSP00000072387

Definition

protein_id:ENSMUSP00000016279
translation:

MEDSFLESFGRLSLQQRQQQPPPRPPPARGPPPRRHSFRKHLYLLRGLPGSGKTTLARQL
QHDYPRALIFSTDDFFFKEDGTYEFNPNLLEEAHEWNQRRARKAMRNGISPIIIDNTNLH
AWEMKPYAVMALENNYEVIFREPDTRWKFNVQELARRNIHGVPKEKIQRMKERYEHNVTF
HSVLHAEKPSRANRNQGRNSEPSSGSGYWNTYTELPNRRANGLYSNEGYRRGGHHQGY

Chromosome

Length
Position(start - end)

21692
150572743 - 150594436

Orient to Chromosome

minus

Link

Location : (5:150572743-150594436)
/

Detail Map

name	Brca2 (ENSMUSG00000041147)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : Brca2 note : breast cancer 2 [Source:MGI Symbol;Acc:MGI:109337]

name	RP24-333I1.7 (ENSMUSG00000106980)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : RP24-333I1.7

name	N4bp2l1 (ENSMUSG00000041132)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : N4bp2l1 note : NEDD4 binding protein 2-like 1 [Source:MGI Symbol;Acc:MGI:2140872]

name	Brca2 (ENSMUSG00000041147)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000044620

name	Brca2 (ENSMUSG00000041147)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000202313

name	N4bp2l1 (ENSMUSG00000041132)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000016279

name	N4bp2l1 (ENSMUSG00000041132)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000202031

name	N4bp2l1 (ENSMUSG00000041132)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000202279

name	N4bp2l1 (ENSMUSG00000041132)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000202291

name	N4bp2l1 (ENSMUSG00000041132)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000200840

name	N4bp2l1 (ENSMUSG00000041132)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000201319

name	N4bp2l1 (ENSMUSG00000041132) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS19887.1 Uniprot/SWISSPROT:Q3V2Q8 RefSeq_peptide:NP_598659 RefSeq_mRNA:NM_133898.4 Vega_transcript:N4bp2l1-001 Vega_transcript:OTTMUST00000137442 UCSC:uc009auc.2 Fantom:1520402E19 Fantom:A330097D18 Fantom:B230342M21 EMBL:AK046116 EMBL:AK131647 EMBL:AK138666 EMBL:BC019754 GO:GO:0003674 GO:GO:0005575 GO:GO:0008150 MGI_trans_name:N4bp2l1-001 Vega_translation:196425 Vega_translation:OTTMUSP00000072387 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0008150 protein_id:AAH19754.1 protein_id:BAC32606.1 protein_id:BAE20739.1 protein_id:BAE23739.1 OTTP:OTTMUSP00000072387 OTTT:OTTMUST00000137442 UniParc:UPI0000021463
definition	note : transcript_id=ENSMUST00000016279 protein_id : ENSMUSP00000016279 translation : MEDSFLESFGRLSLQQRQQQPPPRPPPARGPPPRRHSFRKHLYLLRGLPGSGKTTLARQLQHDYPRALIFSTDDFFFKEDGTYEFNPNLLEEAHEWNQRRARKAMRNGISPIIIDNTNLHAWEMKPYAVMALENNYEVIFREPDTRWKFNVQELARRNIHGVPKEKIQRMKERYEHNVTFHSVLHAEKPSRANRNQGRNSEPSSGSGYWNTYTELPNRRANGLYSNEGYRRGGHHQGY

name	N4bp2l1 (ENSMUSG00000041132) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	RefSeq_peptide_predicted:XP_006504963.1 Vega_transcript:N4bp2l1-002 Vega_transcript:OTTMUST00000137443 UCSC:uc009aub.2 MGI_trans_name:N4bp2l1-002 Vega_translation:196426 Vega_translation:OTTMUSP00000072388 OTTP:OTTMUSP00000072388 OTTT:OTTMUST00000137443 UniParc:UPI00000E63F0
definition	note : transcript_id=ENSMUST00000202031 protein_id : ENSMUSP00000144164 translation : MRNGISPIIIDNTNLHAWEMKPYAVMALENNYEVIFREPDTRWKFNVQELARRNIHGVPKEKIQRMKERYEHNVTFHSVLHAEKPSRANRNQGRNSEPSSGSGYWNTYTELPNRRANGLYSNEGYRRGGHHQGY

name	N4bp2l1 (ENSMUSG00000041132) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:N4bp2l1-005 Vega_transcript:OTTMUST00000137444 MGI_trans_name:N4bp2l1-005 Vega_translation:196427 Vega_translation:OTTMUSP00000072389 OTTP:OTTMUSP00000072389 OTTT:OTTMUST00000137444 UniParc:UPI00064548B2
definition	note : transcript_id=ENSMUST00000202279 protein_id : ENSMUSP00000143792 translation : MEDSFLESFGRLSLQQRQQQPPPRPPPARGPPPRRHSFRKHLYLLRGLPGSGKTTLARYC

name	N4bp2l1 (ENSMUSG00000041132) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:N4bp2l1-007 Vega_transcript:OTTMUST00000137445 UCSC:uc009aub.2 MGI_trans_name:N4bp2l1-007 Vega_translation:196428 Vega_translation:OTTMUSP00000072390 OTTP:OTTMUSP00000072390 OTTT:OTTMUST00000137445 UniParc:UPI00064547A8
definition	note : transcript_id=ENSMUST00000202291 protein_id : ENSMUSP00000144151 translation : MRNGISPIIIDNTNLHAWEMKPYAVMALENNYEVIFREPDTRWKFNVQELA

name	N4bp2l1 (ENSMUSG00000041132) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:N4bp2l1-003 Vega_transcript:OTTMUST00000137446 MGI_trans_name:N4bp2l1-003 Vega_translation:196429 Vega_translation:OTTMUSP00000072391 OTTP:OTTMUSP00000072391 OTTT:OTTMUST00000137446 UniParc:UPI0006454933
definition	note : transcript_id=ENSMUST00000200840 protein_id : ENSMUSP00000144439 translation : MEDSFLESFGRLSLQQRQQQPPPRPPPARGPPPRRHSFRKHLYLLRGLPGSGKTTLASCLTLP

name	N4bp2l1 (ENSMUSG00000041132) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:N4bp2l1-004 Vega_transcript:OTTMUST00000137447 MGI_trans_name:N4bp2l1-004 Vega_translation:196430 Vega_translation:OTTMUSP00000072392 OTTP:OTTMUSP00000072392 OTTT:OTTMUST00000137447 UniParc:UPI00064547E6
definition	note : transcript_id=ENSMUST00000201319 protein_id : ENSMUSP00000144635 translation : MEDSFLESFGRLSLQQRQQQPPPRPPPARGPPPRRHSFRKHLYLLRGLPGSGKTTLAR

name
type	STS
link
xref	UniSTS_NUM:159477 UniSTS:AI428195 WI_MRC-RH:426523
definition	note : map_weight=1 standard_name : AI428195

name
type	STS
link
xref	UniSTS_NUM:207918 UniSTS:BE685977 WI_MRC-RH:1630508
definition	note : map_weight=1 standard_name : BE685977

name
type	misc_feature
link
xref
definition	note : contig AC154885.9 1647..162008(1)

name
type	misc_feature
link
xref
definition	note : contig AC158558.6 1..163452(-1)

name	Brca2 (ENSMUSG00000041147)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000137406 Vega_transcript:OTTMUST00000137406 MGI_trans_name:Brca2-005 OTTT:OTTMUST00000137406
definition	note : processed_transcript note : transcript_id=ENSMUST00000201309

name	Brca2 (ENSMUSG00000041147)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000137408 Vega_transcript:OTTMUST00000137408 MGI_trans_name:Brca2-006 OTTT:OTTMUST00000137408
definition	note : retained_intron note : transcript_id=ENSMUST00000201165

name	RP24-333I1.7 (ENSMUSG00000106980)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000137441 Vega_transcript:OTTMUST00000137441 Clone_based_vega_transcript:RP24-333I1.7-001 OTTT:OTTMUST00000137441
definition	note : lincRNA note : transcript_id=ENSMUST00000201213

name	N4bp2l1 (ENSMUSG00000041132)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000137448 Vega_transcript:OTTMUST00000137448 MGI_trans_name:N4bp2l1-006 OTTT:OTTMUST00000137448
definition	note : retained_intron note : transcript_id=ENSMUST00000200926

Polymorphisms Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	N4bp2l1 (ENSMUSG00000041132)
Transcript ID	ENSMUST00000016279

Reports
substitution
cSNPs	2
Insertion	21
Deletion	25
SNPs	+1kb 150594608(c.-172A>G), 150594621(c.-185G>A), 150594642(c.-206G>C), 150594893(c.-457A>G), 150594916(c.-480T>G), 150595026(c.-590T>C), 150595046(c.-610C>G), 150595394(c.-958G>C), 150595696(c.-1260C>A), 150595714(c.-1278G>A), 150595741(c.-1305A>G), 150595752(c.-1316G>A), 150595913(c.-1477C>A), 150596129(c.-1693C>T), 150596175(c.-1739A>G), 150596605(c.-2169T>C), 150596606(c.-2170T>C), 150596688(c.-2252A>G), 150596690(c.-2254G>A), 150596697(c.-2261T>C), 150596929(c.-2493C>T), 150596984(c.-2548G>A), 150596998(c.-2562G>A), 150597244(c.-2808G>C), 150597317(c.-2881T>C), 150597325(c.-2889T>C), 150597338(c.-2902A>T), 150597391(c.-2955T>C), 150597561(c.-3125T>C), 150597633(c.-3197G>A), 150597686(c.-3250A>G), 150597742(c.-3306A>C), 150597909(c.-3473T>C), 150597936(c.-3500A>T), 150597991(c.-3555G>A), 150598019(c.-3583G>A), 150598067(c.-3631T>C), 150598102(c.-3666G>T), 150598110(c.-3674C>T), 150598152(c.-3716G>C), 150598159(c.-3723C>T), 150598235(c.-3799T>C), 150598288(c.-3852A>G), 150598309(c.-3873G>C), 150598401(c.-3965C>G), 150598425(c.-3989G>C), 150598465(c.-4029T>C), 150598835(c.-4399A>G), 150599156(c.-4720A>G), 150599161(c.-4725C>T), 150599190(c.-4754G>A), 150599193(c.-4757A>C), 150599254(c.-4818T>C), 150599436(c.-5000T>C), 5'UTR CDS 150572839(c.621C>G), 150576725(c.216C>T), 3'UTR 150572004(c.739G>T), 150572333(c.410T>C), 150572335(c.408G>A), 150572413(c.330G>A), 150572436(c.307G>C), 150572631(c.112T>C), 150572727(c.16T>C), INTRON 150573146(c.468-154G>C), 150573147(c.468-155T>C), 150573367(c.468-375T>C), 150573433(c.468-441C>A), 150573634(c.467+366C>T), 150573983(c.467+17G>C), 150574139(c.391-63A>G), 150574263(c.391-187T>C), 150574310(c.391-234T>A), 150574339(c.391-263C>T), 150574424(c.391-348A>G), 150574609(c.391-533T>C), 150574727(c.391-651G>A), 150574740(c.391-664A>T), 150574744(c.391-668G>T), 150575320(c.390+930T>C), 150575646(c.390+604T>G), 150575745(c.390+505C>G), 150576021(c.390+229C>T), 150577011(c.174-244G>A), 150577823(c.174-1056C>T), 150578014(c.174-1247T>C), 150578449(c.174-1682G>A), 150578483(c.174-1716C>T), 150578815(c.174-2048C>A), 150579385(c.174-2618A>C), 150579473(c.174-2706G>C), 150579508(c.174-2741C>T), 150579554(c.174-2787C>A), 150579771(c.174-3004T>C), 150579947(c.174-3180A>T), 150579948(c.174-3181T>C), 150579954(c.174-3187C>T), 150579957(c.174-3190G>T), 150580007(c.174-3240G>A), 150580142(c.174-3375C>T), 150580196(c.174-3429C>A), 150580261(c.174-3494T>C), 150580275(c.174-3508T>C), 150580276(c.174-3509A>G), 150580322(c.174-3555C>T), 150580351(c.174-3584C>T), 150580357(c.174-3590A>G), 150580543(c.174-3776A>G), 150580634(c.174-3867T>C), 150580812(c.174-4045C>G), 150580833(c.174-4066T>C), 150580858(c.174-4091A>T), 150580866(c.174-4099C>T), 150580946(c.174-4179G>A), 150581199(c.174-4432G>A), 150581282(c.174-4515C>T), 150581357(c.174-4590C>G), 150581473(c.174-4706T>C), 150581731(c.174-4964C>T), 150581744(c.174-4977A>G), 150581745(c.174-4978C>T), 150581795(c.174-5028C>G), 150581807(c.174-5040C>T), 150581810(c.174-5043G>A), 150582021(c.174-5254G>C), 150582060(c.174-5293T>C), 150582072(c.174-5305G>A), 150582177(c.174-5410T>C), 150582276(c.174-5509A>G), 150582652(c.174-5885T>C), 150582788(c.174-6021T>A), 150583090(c.174-6323T>A), 150583583(c.174-6816T>C), 150584525(c.174-7758C>A), 150584651(c.174-7884G>T), 150585319(c.174-8552G>T), 150585913(c.173+8351A>G), 150586065(c.173+8199T>C), 150586125(c.173+8139A>T), 150586426(c.173+7838T>C), 150586442(c.173+7822T>C), 150586535(c.173+7729A>G), 150586606(c.173+7658C>T), 150586622(c.173+7642C>A), 150586630(c.173+7634A>G), 150586684(c.173+7580A>T), 150586781(c.173+7483G>C), 150586805(c.173+7459T>G), 150586819(c.173+7445G>A), 150586827(c.173+7437C>T), 150586852(c.173+7412C>G), 150586870(c.173+7394G>A), 150586921(c.173+7343A>G), 150586995(c.173+7269A>T), 150586996(c.173+7268A>T), 150587053(c.173+7211G>A), 150587186(c.173+7078C>A), 150587187(c.173+7077A>G), 150587207(c.173+7057T>A), 150587303(c.173+6961C>T), 150587339(c.173+6925C>T), 150587346(c.173+6918T>G), 150587438(c.173+6826C>T), 150587451(c.173+6813A>G), 150587639(c.173+6625A>C), 150587642(c.173+6622C>T), 150587674(c.173+6590T>C), 150587778(c.173+6486A>G), 150587787(c.173+6477A>G), 150587820(c.173+6444G>T), 150587956(c.173+6308C>T), 150588257(c.173+6007G>A), 150588729(c.173+5535T>G), 150589035(c.173+5229C>T), 150589056(c.173+5208G>A), 150589425(c.173+4839G>A), 150589585(c.173+4679A>G), 150589713(c.173+4551A>C), 150589934(c.173+4330T>A), 150589957(c.173+4307C>A), 150590728(c.173+3536T>C), 150590773(c.173+3491C>A), 150590870(c.173+3394T>A), 150590879(c.173+3385T>C), 150590914(c.173+3350T>A), 150590987(c.173+3277G>A), 150591064(c.173+3200A>G), 150591167(c.173+3097C>T), 150591328(c.173+2936A>G), 150591330(c.173+2934A>G), 150591391(c.173+2873C>A), 150591393(c.173+2871T>A), 150591433(c.173+2831C>G), 150591515(c.173+2749T>C), 150591518(c.173+2746T>C), 150591814(c.173+2450A>T), 150591848(c.173+2416G>A), 150591862(c.173+2402T>C), 150591927(c.173+2337A>C), 150591945(c.173+2319G>T), 150592015(c.173+2249A>G), 150592049(c.173+2215A>G), 150592077(c.173+2187A>G), 150592102(c.173+2162G>T), 150592133(c.173+2131C>T), 150592208(c.173+2056G>A), 150592490(c.173+1774C>T), 150592659(c.173+1605T>C), 150592887(c.173+1377A>T), 150592888(c.173+1376A>G), 150592889(c.173+1375C>G), 150592901(c.173+1363T>C), 150592916(c.173+1348A>G), 150592971(c.173+1293C>A), 150593040(c.173+1224C>T), 150593116(c.173+1148C>T), 150593482(c.173+782G>A), 150593710(c.173+554A>T), 150593773(c.173+491C>G), 150593774(c.173+490G>T), 150594232(c.173+32T>C), -1kb 150566707(c.6036G>A), 150566795(c.5948T>C), 150566813(c.5930A>C), 150566828(c.5915G>A), 150566840(c.5903A>C), 150566862(c.5881T>C), 150567160(c.5583G>T), 150567168(c.5575A>C), 150567314(c.5429T>C), 150567474(c.5269A>G), 150567652(c.5091C>T), 150567840(c.4903C>A), 150568043(c.4700A>G), 150568224(c.4519C>T), 150568235(c.4508C>G), 150568452(c.4291C>A), 150568512(c.4231T>G), 150568651(c.4092A>G), 150568665(c.4078A>G), 150568688(c.4055G>A), 150568717(c.4026G>A), 150568849(c.3894T>C), 150568994(c.3749A>G), 150569009(c.3734A>G), 150569049(c.3694C>A), 150569087(c.3656C>T), 150569131(c.3612A>G), 150569214(c.3529G>A), 150569217(c.3526T>A), 150569249(c.3494C>T), 150569334(c.3409G>A), 150569340(c.3403C>T), 150569348(c.3395G>A), 150569415(c.3328T>A), 150569433(c.3310T>A), 150569518(c.3225C>T), 150569573(c.3170C>T), 150569660(c.3083G>A), 150569684(c.3059C>A), 150569747(c.2996T>C), 150569749(c.2994T>C), 150569900(c.2843C>T), 150569917(c.2826C>A), 150569918(c.2825A>G), 150569940(c.2803A>C), 150570267(c.2476T>A), 150570305(c.2438A>G), 150570391(c.2352G>A), 150570464(c.2279T>C), 150570670(c.2073A>G), 150570771(c.1972T>C), 150570819(c.1924T>C), 150571003(c.1740T>A), 150571059(c.1684T>C), 150571076(c.1667T>C), 150571082(c.1661A>G), 150571164(c.1579G>A), 150571251(c.1492A>G), 150571379(c.1364T>G), 150571423(c.1320C>T), 150571426(c.1317A>G), 150571563(c.*1180G>A),
Insertions	+1kb 150595016 (c.-581_-580insGT), 150596069 (c.-1634_-1633insACAAC), 150596085 (c.-1650_-1649insCACCA), 150597017 (c.-2583_-2582dupTG), 150598480 (c.-4045_-4044insT), 150599446 (c.-5011_-5010insCCT), 5'UTR CDS 3'UTR 150571833 (c.909_910insAT), INTRON 150575961 (c.390+288_390+289insTCC), 150580782 (c.174-4016_174-4015insGG), 150582153 (c.174-5387_174-5386insA), 150582260 (c.174-5495_174-5494dupCT), 150582263 (c.174-5497_174-5496insCT), 150582435 (c.174-5669_174-5668insAAACAA), 150583516 (c.174-6752_174-6750dupCAC), 150586477 (c.173+7786_173+7787insATTT), 150587820 (c.173+6443_173+6444insGT), 150589800 (c.173+4461_173+4463dupACA), -1kb 150567295 (c.5447_5448insGGAG), 150567506 (c.5232_5236dupCAGAA), 150568501 (c.4241_4242insG), 150569588 (c.*3154dupA),
Deletions	+1kb 150596057 (c.-1624_-1622delCCC), 150596318 (c.-1888_-1883delCTCTCT), 150596543 (c.-2111_-2108delAACG), 150597610 (c.-3177_-3175delGCG), 150598496 (c.-4063_-4061delTCT), 150599206 (c.-4771delA), 5'UTR CDS 3'UTR INTRON 150573987 (c.467+12delT), 150574080 (c.391-5delA), 150574084 (c.391-9delA), 150574402 (c.391-331_391-327delATGAT), 150574802 (c.391-729_391-727delAAC), 150575961 (c.390+288delT), 150575972 (c.390+277delT), 150575974 (c.390+275delT), 150577586 (c.174-828_174-820delTTGGGTTTT), 150579385 (c.174-2621_174-2619delGTG), 150580097 (c.174-3331delA), 150581930 (c.174-5171_174-5164delTATCTTTG), 150584798 (c.174-8032delA), 150585081 (c.174-8320_174-8315delCCAGAA), 150585548 (c.173+8714_173+8715delAA), 150591032 (c.173+3228_173+3231delTGAG), 150591298 (c.173+2962_173+2965delACAC), 150592889 (c.173+1373_173+1374delTC), -1kb 150567218 (c.5521_5524delTGTG),
coding sequence substitutions
premature termination by the nucleotide substitution	0
synonymous num	2
non-synonymous num	0
synonymous substitutions	150572839 (p.Gly207Gly), 150576725 (p.Thr72Thr),
non-synonymous substitutions
B6 transcript (ENSMUST00000016279)	MEDSFLESFGRLSLQQRQQQPPPRPPPARGPPPRRHSFRKHLYLLRGLPGSGKTTLARQL QHDYPRALIFSTDDFFFKEDGTYEFNPNLLEEAHEWNQRRARKAMRNGISPIIIDNTNLH AWEMKPYAVMALENNYEVIFREPDTRWKFNVQELARRNIHGVPKEKIQRMKERYEHNVTF HSVLHAEKPSRANRNQGRNSEPSSGSGYWNTYTELPNRRANGLYSNEGYRRGGHHQGY*
MSMv4 transcript	MEDSFLESFGRLSLQQRQQQPPPRPPPARGPPPRRHSFRKHLYLLRGLPGSGKTTLARQL QHDYPRALIFSTDDFFFKEDGTYEFNPNLLEEAHEWNQRRARKAMRNGISPIIIDNTNLH AWEMKPYAVMALENNYEVIFREPDTRWKFNVQELARRNIHGVPKEKIQRMKERYEHNVTF HSVLHAEKPSRANRNQGRNSEPSSGSGYWNTYTELPNRRANGLYSNEGYRRGGHHQGY*
homology	100.00 (239 / 239)

Exon Detail Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	N4bp2l1 (ENSMUSG00000041132)
Transcript ID	ENSMUST00000016279


..........GCAACCTGACTGCTCCACACCCCAACCCAGGGGAAGTCCAAAGCCAGCGA
GATGCACAGGCAGCTGTCCTCCCTCCTTGTACACAGCCCCTTCCTAACGCGCTCATCAGG
AAATCTCTGATTTTGACATAGCTTCTGAGTCTTAGAAAGACACTACTTCTTTCTCCACAC
TTCCTTCTCATAATGCTCATACCTTAGGTGCCAGACACAAAATGTTTTGATTTTTACAAC
AATTGTAGCCAAAGCCACCAATATCTCAGATTTTCTAGTATGCAAATTTTGAACAGTTTC
ATTCTGAAAACCAGGACCATTCTATTGCTTCTAAAGGGAAATACTGGAGAGTCACAGCCA
GTGGGTGCTGCCAACTCCTGCAACTTGAATTTGGTTTTATATAAATGGTACCATGACAAT
CTCCCCTGCTATGTGGCAGCGGAAGGTGTTCATGAAGCCTCCTGAGTCCACCCGAGACCC
AAGGAGTAAGAAGAGACTTAAAAGTTGCATACAGCTTTTAAGGATAGTTTTGGCAGGCCG
GTACCGGTACTAAGGAAACGTACAGGACCCTGAAGGAGTGTACCTCAGTCCTTGGGACCC
CAGCCAGGTGCTGACTGATGCACAGGCAGTAGGGGAGACAACGGTCTTTACTGTGACTGC
TCGGATGCGCTGGTCACATTCTCTAATCTCCCACGGAAAGTATTTACTTTCAAGGTCTAG
GCCGGTCTGAAGTGAGATGAGGCAGAGCCGTGGCAGAGGGCTGGGCTTCCACAGTGACTG
CAGGGAAACCTCCCACTGTGTCCCCGGGGCCAGGCCCCTTCCCTTGGGAAGGGCTGCGGA
AGGCGGCGGGGGGCTGGAGGGAGCGCTGGGGGCTGCGTCACCCACGCTTCCCCCGGCTGT
CAGACTCCCCGGCAACGCCGGGGCCTCGCAGGTAGAGACGCCCCCTCCCGCGGTTCGCGG
GGCCGGGGAGGAGGGGCCGGGCTCCGAGCGCCCGCCCCTCCATCTATCAC
ATGGCCGGAGAGTCACAAAAACAACAGCTTTGGCCAAGACCGTGACTTCAGGAAGGGAGCTCAGGGCCCTCGCCGCCAGCCCCCTCCCCATGGAGGACAGTTTTCTGGAATCGTTCGGGAGGCTGAGCCTCCAACAGCGGCAGCAGCAGCCGCCTCCTCGGCCGCCGCCCGCTCGGGGGCCACCTCCGCGCCGCCACAGCTTTAGGAAACACCTCTACCTCCTGCGCGGCCTCCCGGGCTCGGGAAAAACCACGCTGGCCAG
GTAATGAGAGCGGCCTGGCGCCCAC..........CCTTTTCTGTTTCTCCACTTTGCAG
ACAGCTGCAGCACGACTACCCCAGAGCCCTGATTTTCAGCACTGATGACTTTTTCTTCAAGGAAGATGGCACCTATGAGTTCAACCCCAACCTCTTGGAGGAAGCTCATGAGTGGAACCAGAGAAGAG
GTGACAAATTCCTCTCCAAACACGG..........ACCATTGTGTTGCATTGTGTTACAG
CAAGGAAAGCAATGAGGAATGGCATATCCCCCATTATTATTGATAACACCAACCTGCACGCCTGGGAAATGAAGCCCTATGCAGTCATG
GTAGGGAGAAGTATCATTCTGAATT..........GTCTTATGTGCTTCTGAAAAATCAG
GCTCTTGAGAATAACTATGAAGTTATATTCCGGGAACCCGACACTCGCTGGAAATTCAACGTTCAAGAGTTAGCAAG
GTACCTCTTTGTTTTTGCTAGTTCT..........TTTTGTTTTCCTTTTTTCTACGTAG
AAGAAACATCCATGGGGTCCCAAAAGAAAAAATACAACGAATGAAAGAACGGTATGAACACAATGTTACCTTTCACAGTGTCCTTCATGCAGAAAAGCCGAGCAGAGCGAACAGAAACCAGGGCAGGAACAGCGAACCGTCCAGTGGCTCCGGGTACTGGAACACCTACACAGAGCTCCCCAACCGGAGAGCTAATGGCCTCTACTCCAACGAGGGCTACAGAAGGGGTGGCCACCACCAAGGATATTAATGGCCCGGGCACAGCCACTGCAGAATTTTCCTAGAGAAAGTTTCTACTTCAATTTTTGGTATTTATTCTTTGTTCAGGGTTAGCCAGAGCTCTAAGTCCAGTGTAAATAGTCGAGCCCAGAAGTTTCTGAACAGAGGTCATTCTATTTATTATCTCCAACAAGTGACGTCAGCGTGCGTCCGTACTCATGGTCTGATGCTGGGGACCTGCTGAGGAGTCAAGGGTCTTTCTCCAGGGAAAGAATTGGATTGAAATTGAAATCCAAGATTATCAATTAGTTGCTACAGTCATGAATAAAACAAGATGCTACTAGTACATTTCTATAGGCTACAGTACTACTGTCTCTGACAGATCCAGCCTCTCCACAGAGCTGGAGAGGTGAGGGAGGCAGAGGCAGGAAGCAGCTTAGCGCCATTGCCGCTTTGATGATCTATCTGCCTCCAGAGACCTGAGCCGTCACTTTAATGGCACTGATTTTCTTTTAGACCTAAAGTGCAGAAGGGAATGTAGTCCTTCAGGGTAACATTAGGAGAGTTACCCCCCTCTGTTAAAAATGCCTGTGAATTCTTAGTAACAAAGGCAACTAAGAAGAATCAGTACCATTATAGTCAAACCCTGTAGACAGCAGTGTCAGGACAAACTCCTCCCTCTAGCTTGTAGTCTAACGGTGTAAATAATTCTGCTTTCGCAAAATACCAGTTTTTAAGAATCATCAAGTGATTTCTAAAATGATGCCTTTTAACGTGTTATTAATTAGTAACCCAGTTATTTAGGAGTGCAAAGCAAGGAAGCAGCCAGGGTGATACAAGGAGATATGAAAGCCATGCCCACCTGGATGAGCAGTCTGGCTGTTGTATGTGGTGTTGAGACAGTAAACTGTGGAATGCCCCTCATATCAATTATGGATGTGAGTCCAAATTAAATCCCAGCAGGCTGGAGTCAGATTCATTGGTATGAGAACGTGACAAGACCATGTGAAATGTATGCTCTATTTATTTTTGGCCAACAGCTTCTTTCTAATGTTTTGTGAGATATTATTTTAAGTGTCTTATATAATGGTGCTTTTATGGTTATTAAAATTGTATATGGTATTGAATTT
ATATTGGGTTTTCCATTGAATTTATTTTTTGTCTAACAACAAAACATTTACCAAAATCCA
AGGACTTCACCCAAAAAATAACCTTTGCATATATAATAGGCTTATTCTTGAATCATTGTT
AATAACTGGGAGGAATGAAGGCCATACATTAGAAAGCCTACCTGCCACGCCATTATCAAC
TGTTGGAATCTACTCAACATCTTCCTGACAATAAGCGGCATACTTCCCTAACATTTTCCA
AATTGGTGTCTTAGTAATAAGTAAGGTTATATAAAAATAACTAACACCAATAATAACTAT
AACAAAAAAGCCCAGATGATGAGTCTCATAGTAAATTGGGATGACTCTGCCATTTTAAAT
TTGCACATGGCAGTCCTGTAGCAATTCATTTAGTTTTCTTACCTGCCAGGCCCAGGTAAT
TGTTGGAATCATAGCCTGTATGCTGCCTGTGTGCATGACTTTGGTATGGATGGCTTCATA
CATCTAAGTTGGCAAAGGGGAGAAGGGTCAGAGGCCAAATGGAATTCCCTTCCTCTAGTT
CCATACGTGCAGCCAAAGGACGGGATCCGCGTTCTCTGATGTGGCTGGTTGGCTCTCAGA
GCTTTGGTTTGCCTGGGCTGAGACCAAAGACCACAATAAAAGGCTTTGGCTTTGGGCCCA
GAGCCTTCTCAGAGCTCTCAAAGTCCTGCCCAACCATGTCTCTGCTTTCTTCTACATGGA
AATACCAAAATACTTGGTTTGGAAGCATAAAATTGATTAAATGCCACCAAGCTTATCCCA
AAAACCAACTGATTAAATGCTACCAAGTACGTATTTAAAAGCAACACATACTTTCCCTTC
CGACTCCTCTGGCTTCTGTCTTACGGACCCTTCGAACAGCTATCACTGACTCACTCCCGT
TACTATAGCTCCACTTGCATTATTCATAGAATTAGCCGAGCGCTCTGCAACCAAAGGCTC
TCAGTAAGAATAAGTAACGCCAAATGCTTTTGCCATTCAT..........

No.	Exon / Intron	Start	End	Start Phase	End Phase	Length	Sequence
	5' upstream sequence						..........GCAACCTGACTGCTCCACACCCCAACCCAGGGGAAGTCCAAAGCCAGCGA GATGCACAGGCAGCTGTCCTCCCTCCTTGTACACAGCCCCTTCCTAACGCGCTCATCAGG AAATCTCTGATTTTGACATAGCTTCTGAGTCTTAGAAAGACACTACTTCTTTCTCCACAC TTCCTTCTCATAATGCTCATACCTTAGGTGCCAGACACAAAATGTTTTGATTTTTACAAC AATTGTAGCCAAAGCCACCAATATCTCAGATTTTCTAGTATGCAAATTTTGAACAGTTTC ATTCTGAAAACCAGGACCATTCTATTGCTTCTAAAGGGAAATACTGGAGAGTCACAGCCA GTGGGTGCTGCCAACTCCTGCAACTTGAATTTGGTTTTATATAAATGGTACCATGACAAT CTCCCCTGCTATGTGGCAGCGGAAGGTGTTCATGAAGCCTCCTGAGTCCACCCGAGACCC AAGGAGTAAGAAGAGACTTAAAAGTTGCATACAGCTTTTAAGGATAGTTTTGGCAGGCCG GTACCGGTACTAAGGAAACGTACAGGACCCTGAAGGAGTGTACCTCAGTCCTTGGGACCC CAGCCAGGTGCTGACTGATGCACAGGCAGTAGGGGAGACAACGGTCTTTACTGTGACTGC TCGGATGCGCTGGTCACATTCTCTAATCTCCCACGGAAAGTATTTACTTTCAAGGTCTAG GCCGGTCTGAAGTGAGATGAGGCAGAGCCGTGGCAGAGGGCTGGGCTTCCACAGTGACTG CAGGGAAACCTCCCACTGTGTCCCCGGGGCCAGGCCCCTTCCCTTGGGAAGGGCTGCGGA AGGCGGCGGGGGGCTGGAGGGAGCGCTGGGGGCTGCGTCACCCACGCTTCCCCCGGCTGT CAGACTCCCCGGCAACGCCGGGGCCTCGCAGGTAGAGACGCCCCCTCCCGCGGTTCGCGG GGCCGGGGAGGAGGGGCCGGGCTCCGAGCGCCCGCCCCTCCATCTATCAC
1	EXON 1	150594264	150594525	-	2	262	ATGGCCGGAGAGTCACAAAAACAACAGCTTTGGCCAAGACCGTGACTTCAGGAAGGGAGC TCAGGGCCCTCGCCGCCAGCCCCCTCCCCATGGAGGACAGTTTTCTGGAATCGTTCGGGA GGCTGAGCCTCCAACAGCGGCAGCAGCAGCCGCCTCCTCGGCCGCCGCCCGCTCGGGGGC CACCTCCGCGCCGCCACAGCTTTAGGAAACACCTCTACCTCCTGCGCGGCCTCCCGGGCT CGGGAAAAACCACGCTGGCCAG
	INTRON 1 - 2	150576768	150594263			17496	GTAATGAGAGCGGCCTGGCGCCCAC..........CCTTTTCTGTTTCTCCACTTTGCAG
2	EXON 2	150576640	150576767	2	1	128	ACAGCTGCAGCACGACTACCCCAGAGCCCTGATTTTCAGCACTGATGACTTTTTCTTCAA GGAAGATGGCACCTATGAGTTCAACCCCAACCTCTTGGAGGAAGCTCATGAGTGGAACCA GAGAAGAG
	INTRON 2 - 3	150576339	150576639			301	GTGACAAATTCCTCTCCAAACACGG..........ACCATTGTGTTGCATTGTGTTACAG
3	EXON 3	150576250	150576338	1	0	89	CAAGGAAAGCAATGAGGAATGGCATATCCCCCATTATTATTGATAACACCAACCTGCACG CCTGGGAAATGAAGCCCTATGCAGTCATG
	INTRON 3 - 4	150574077	150576249			2173	GTAGGGAGAAGTATCATTCTGAATT..........GTCTTATGTGCTTCTGAAAAATCAG
4	EXON 4	150574000	150574076	0	2	77	GCTCTTGAGAATAACTATGAAGTTATATTCCGGGAACCCGACACTCGCTGGAAATTCAAC GTTCAAGAGTTAGCAAG
	INTRON 4 - 5	150572993	150573999			1007	GTACCTCTTTGTTTTTGCTAGTTCT..........TTTTGTTTTCCTTTTTTCTACGTAG
5	EXON 5	150571644	150572992	2	-	1349	AAGAAACATCCATGGGGTCCCAAAAGAAAAAATACAACGAATGAAAGAACGGTATGAACA CAATGTTACCTTTCACAGTGTCCTTCATGCAGAAAAGCCGAGCAGAGCGAACAGAAACCA GGGCAGGAACAGCGAACCGTCCAGTGGCTCCGGGTACTGGAACACCTACACAGAGCTCCC CAACCGGAGAGCTAATGGCCTCTACTCCAACGAGGGCTACAGAAGGGGTGGCCACCACCA AGGATATTAATGGCCCGGGCACAGCCACTGCAGAATTTTCCTAGAGAAAGTTTCTACTTC AATTTTTGGTATTTATTCTTTGTTCAGGGTTAGCCAGAGCTCTAAGTCCAGTGTAAATAG TCGAGCCCAGAAGTTTCTGAACAGAGGTCATTCTATTTATTATCTCCAACAAGTGACGTC AGCGTGCGTCCGTACTCATGGTCTGATGCTGGGGACCTGCTGAGGAGTCAAGGGTCTTTC TCCAGGGAAAGAATTGGATTGAAATTGAAATCCAAGATTATCAATTAGTTGCTACAGTCA TGAATAAAACAAGATGCTACTAGTACATTTCTATAGGCTACAGTACTACTGTCTCTGACA GATCCAGCCTCTCCACAGAGCTGGAGAGGTGAGGGAGGCAGAGGCAGGAAGCAGCTTAGC GCCATTGCCGCTTTGATGATCTATCTGCCTCCAGAGACCTGAGCCGTCACTTTAATGGCA CTGATTTTCTTTTAGACCTAAAGTGCAGAAGGGAATGTAGTCCTTCAGGGTAACATTAGG AGAGTTACCCCCCTCTGTTAAAAATGCCTGTGAATTCTTAGTAACAAAGGCAACTAAGAA GAATCAGTACCATTATAGTCAAACCCTGTAGACAGCAGTGTCAGGACAAACTCCTCCCTC TAGCTTGTAGTCTAACGGTGTAAATAATTCTGCTTTCGCAAAATACCAGTTTTTAAGAAT CATCAAGTGATTTCTAAAATGATGCCTTTTAACGTGTTATTAATTAGTAACCCAGTTATT TAGGAGTGCAAAGCAAGGAAGCAGCCAGGGTGATACAAGGAGATATGAAAGCCATGCCCA CCTGGATGAGCAGTCTGGCTGTTGTATGTGGTGTTGAGACAGTAAACTGTGGAATGCCCC TCATATCAATTATGGATGTGAGTCCAAATTAAATCCCAGCAGGCTGGAGTCAGATTCATT GGTATGAGAACGTGACAAGACCATGTGAAATGTATGCTCTATTTATTTTTGGCCAACAGC TTCTTTCTAATGTTTTGTGAGATATTATTTTAAGTGTCTTATATAATGGTGCTTTTATGG TTATTAAAATTGTATATGGTATTGAATTT
	3' upstream sequence						ATATTGGGTTTTCCATTGAATTTATTTTTTGTCTAACAACAAAACATTTACCAAAATCCA AGGACTTCACCCAAAAAATAACCTTTGCATATATAATAGGCTTATTCTTGAATCATTGTT AATAACTGGGAGGAATGAAGGCCATACATTAGAAAGCCTACCTGCCACGCCATTATCAAC TGTTGGAATCTACTCAACATCTTCCTGACAATAAGCGGCATACTTCCCTAACATTTTCCA AATTGGTGTCTTAGTAATAAGTAAGGTTATATAAAAATAACTAACACCAATAATAACTAT AACAAAAAAGCCCAGATGATGAGTCTCATAGTAAATTGGGATGACTCTGCCATTTTAAAT TTGCACATGGCAGTCCTGTAGCAATTCATTTAGTTTTCTTACCTGCCAGGCCCAGGTAAT TGTTGGAATCATAGCCTGTATGCTGCCTGTGTGCATGACTTTGGTATGGATGGCTTCATA CATCTAAGTTGGCAAAGGGGAGAAGGGTCAGAGGCCAAATGGAATTCCCTTCCTCTAGTT CCATACGTGCAGCCAAAGGACGGGATCCGCGTTCTCTGATGTGGCTGGTTGGCTCTCAGA GCTTTGGTTTGCCTGGGCTGAGACCAAAGACCACAATAAAAGGCTTTGGCTTTGGGCCCA GAGCCTTCTCAGAGCTCTCAAAGTCCTGCCCAACCATGTCTCTGCTTTCTTCTACATGGA AATACCAAAATACTTGGTTTGGAAGCATAAAATTGATTAAATGCCACCAAGCTTATCCCA AAAACCAACTGATTAAATGCTACCAAGTACGTATTTAAAAGCAACACATACTTTCCCTTC CGACTCCTCTGGCTTCTGTCTTACGGACCCTTCGAACAGCTATCACTGACTCACTCCCGT TACTATAGCTCCACTTGCATTATTCATAGAATTAGCCGAGCGCTCTGCAACCAAAGGCTC TCAGTAAGAATAAGTAACGCCAAATGCTTTTGCCATTCAT..........

Sequence Detail Report

Gene Symbol (Gene ID)	N4bp2l1 (ENSMUSG00000041132)
Transcript ID	ENSMUST00000016279

		SNP Information
Strain :
Sequence Retrieve :
Exon translate : CDS Start ( 1 ) - End ( 239 ) -
Strand :	forward reverse
Show sequence :	nucleotide amino acid
Color information