MoG+ -Mouse Genome database with high added value-

Target CDS Information

Gene Symbol (Gene ID)

Dctn5 (ENSMUSG00000030868)

Cross Reference

CCDS	CCDS21811.1
EMBL	AF190795, AK010238, AK051957, ...show all
Fantom	2310081F19, 2810020F19, 4930427E12, ...show all
GO	GO:0000777, GO:0003674, GO:0005515, ...show all
goslim_goa	GO:0003674, GO:0005575, GO:0005622, ...show all
MGI_trans_name	Dctn5-001
OTTP	OTTMUSP00000025873
OTTT	OTTMUST00000054251
protein_id	AAF05615.1, AAH05671.1, AAH10834.1, ...show all
Reactome	R-MMU-1280218, R-MMU-168256, R-MMU-2132295

RefSeq_mRNA	NM_021608.3
RefSeq_peptide	NP_067621
UCSC	uc009jon.2
UniParc	UPI0000023610
Uniprot/SWISSPROT	Q9QZB9
Vega_transcript	Dctn5-001, OTTMUST00000054251
Vega_translation	202436, OTTMUSP00000025873

Definition

protein_id:ENSMUSP00000033156
translation:

MELGELLYNKSEYIETASGNKVSRQSVLCGSQNIVLNGKTIIMNDCIIRGDLANVRVGRH
CVVKSRSVIRPPFKKFSKGVAFFPLHIGDHVFIEEDCVVNAAQIGSYVHVGKNCVIGRRC
VLKDCCKILDNTVLPPETVVPPFTVFSGCPGLFSGELPECTQELMIDVTKSYYQKFLPLT
QV

Chromosome

Length
Position(start - end)

15019
122133134 - 122148154

Orient to Chromosome

plus

Link

Location : (7:122133134-122148154)
/

Detail Map

name	Palb2 (ENSMUSG00000044702)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : Palb2 note : partner and localizer of BRCA2 [Source:MGI Symbol;Acc:MGI:3040695]

name	Gm16326 (ENSMUSG00000089631)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : Gm16326 note : predicted gene 16326 [Source:MGI Symbol;Acc:MGI:3840124]

name	Dctn5 (ENSMUSG00000030868)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : Dctn5 note : dynactin 5 [Source:MGI Symbol;Acc:MGI:1891689]

name	Gm15489 (ENSMUSG00000086942)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : Gm15489 note : predicted gene 15489 [Source:MGI Symbol;Acc:MGI:3705099]

name	Palb2 (ENSMUSG00000044702)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000098068

name	Palb2 (ENSMUSG00000044702)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000106469

name	Palb2 (ENSMUSG00000044702)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000063587

name	Palb2 (ENSMUSG00000044702)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000106468

name	Palb2 (ENSMUSG00000044702)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000142952

name	Palb2 (ENSMUSG00000044702)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000130149

name	Dctn5 (ENSMUSG00000030868)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000033156

name	Dctn5 (ENSMUSG00000030868)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000176193

name	Dctn5 (ENSMUSG00000030868)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000176295

name	Palb2 (ENSMUSG00000044702) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS40117.1 Uniprot/SWISSPROT:Q3U0P1 RefSeq_peptide:NP_001074707 RefSeq_mRNA:NM_001081238.2 Vega_transcript:OTTMUST00000054269 Vega_transcript:Palb2-001 UCSC:uc009joj.2 Fantom:4732427B05 Fantom:F830038L21 EMBL:AK028653 EMBL:AK156701 EMBL:BC055302 EMBL:BC066140 GO:GO:0000724 GO:GO:0000724 GO:GO:0001701 GO:GO:0001756 GO:GO:0001833 GO:GO:0003677 GO:GO:0003677 GO:GO:0005654 GO:GO:0005654 GO:GO:0007498 GO:GO:0009887 GO:GO:0031052 GO:GO:0035264 GO:GO:0036342 GO:GO:0043066 GO:GO:0048568 MGI_trans_name:Palb2-001 Vega_translation:202431 Vega_translation:OTTMUSP00000025884 goslim_goa:GO:0003674 goslim_goa:GO:0003677 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0006259 goslim_goa:GO:0006950 goslim_goa:GO:0008150 goslim_goa:GO:0008283 goslim_goa:GO:0009790 goslim_goa:GO:0034641 goslim_goa:GO:0040007 goslim_goa:GO:0043226 goslim_goa:GO:0048646 goslim_goa:GO:0048856 goslim_goa:GO:0051276 protein_id:AAH55302.1 protein_id:AAH66140.1 protein_id:BAC26048.1 protein_id:BAE33811.1 OTTP:OTTMUSP00000025884 OTTT:OTTMUST00000054269 Reactome:R-MMU-419524 Reactome:R-MMU-73894 UniParc:UPI000047A107
definition	note : transcript_id=ENSMUST00000098068 protein_id : ENSMUSP00000095675 translation : MEELSGKPLSYAEKEKLKEKLAFLKKEYSRTLARLQRAKRAEKAKNSKKAIEDGVPQPEASSQLSHSESINKGFPCDTLQSNHLDEETGENISQILDVEPQSFNCKQGKEVLHTPRAGDIQGQLLHSTSSPDGKKEQNTLPGTTKTPWEKSSVSQEKEDYFDTNSLALLGKHRKGQESISRKNSRTPVSEKTHLLSLRSQIPDPPALVTGIGEGILIPPSGKSERGIDTLVRGNTVSAEAAVPSCTASNSNHSQHLEHTPPKSGCKITTQGPASSTNLVAQDQKMTIFTVNSVVYKAVRAHGQLPGSPNSCSVNDLTHSNLPANSTPNSKSLKSPSNTVDERNEPLQEDEILGPSKNFNLAAVSPPSTESQIHSCTMLEGLLFPAEYYVRTTRRMSDCQRKIALEAVIQSHLGVKKKELKKKTKATKAVVLSSEDTDQSESGMLDTSTGQSSSGSLSQKLLSPAEVSSPPGPAGKATTPPPGRGHRGKRKSARTSTLGHCQLLFPPCAALAVNRSKGKFTKHKCQNRGVVIHDFELPDEDFGLLKLEKLKSCSEKLIESPDSKNCGERLPREGNHAALEELQRDSETEGLEEELTVPPGEAYRPGPTLRRQPGSKDLSSSIVLFTPADTAAPNDSGRPPPSLCSPAFPILGMTPALGSQAAGETLSTEAAQPCSTSQPPLLGDTNSLVNNSKQCNSSACSPKPDTNLQASGRQGQPACDSDSGPQATPLPVESFTFRENQLCGNACLELHEHSTEQTETADRPACDNLNPGNLQLVSELKNPSSSCSVDVSAMWWERAGAKEPCIVTACEDVVSLWKPLNSLQWEKVHTWHFTEVPVLQIVPVPDVYNLICVALGSLEIREIRALLCSSGDDSEKQVLLKSGDIKAMLGLTKRRLVSSTGTFCNQQIQIMTFADDGSSKDEQLLMPPDETVLTFAEVQGTQEALLGTTTVNSIVIWNLKTGQLLKKMHIDDSYQASVCHGAYSEKGLLFVVVSQPCAKESQALGSPVFQLLVINPKTAQSVGVLLCSLPQGQAGRFLEGDVKDHVAAAVLTSGTIAIWDLLLGHCTALLPPVSDQSWSLVKWSGTDSHLLAGQKDGNIFIYRYF

name	Palb2 (ENSMUSG00000044702) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS72035.1 Uniprot/SWISSPROT:Q3U0P1 RefSeq_peptide:NP_001276773 RefSeq_mRNA:NM_001289844.1 RefSeq_mRNA_predicted:XM_006507704 Vega_transcript:OTTMUST00000054270 Vega_transcript:Palb2-002 UCSC:uc012ftg.2 Fantom:4732427B05 Fantom:F830038L21 EMBL:AK028653 EMBL:AK156701 EMBL:BC055302 EMBL:BC066140 GO:GO:0000724 GO:GO:0001701 GO:GO:0001756 GO:GO:0001833 GO:GO:0003677 GO:GO:0005654 GO:GO:0007498 GO:GO:0009887 GO:GO:0031052 GO:GO:0035264 GO:GO:0036342 GO:GO:0043066 GO:GO:0048568 MGI_trans_name:Palb2-002 Vega_translation:202429 Vega_translation:OTTMUSP00000025885 goslim_goa:GO:0003674 goslim_goa:GO:0003677 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0006259 goslim_goa:GO:0006950 goslim_goa:GO:0008150 goslim_goa:GO:0008283 goslim_goa:GO:0009790 goslim_goa:GO:0034641 goslim_goa:GO:0040007 goslim_goa:GO:0043226 goslim_goa:GO:0048646 goslim_goa:GO:0048856 goslim_goa:GO:0051276 protein_id:AAH55302.1 protein_id:AAH66140.1 protein_id:BAC26048.1 protein_id:BAE33811.1 OTTP:OTTMUSP00000025885 OTTT:OTTMUST00000054270 Reactome:R-MMU-419524 Reactome:R-MMU-73894 UniParc:UPI000023C816
definition	note : transcript_id=ENSMUST00000106469 protein_id : ENSMUSP00000102077 translation : MEELSGKPLSYAEKEKLKEKLAFLKKEYSRTLARLQRAKRAEKAKNSKKAIEDGVPQPEASSQLSHSESINKGFPCDTLQSNHLDEETGENISQILDVEPQSFNCKQGKEVLHTPRAGDIQGQLLHSTSSPDGKKEQNTLPGTTKTPWEKSSVSQEKEDYFDTNSLALLDFELPDEDFGLLKLEKLKSCSEKLIESPDSKNCGERLPREGNHAALEELQRDSETEGLEEELTVPPGEAYRPGPTLRRQPGSKDLSSSIVLFTPADTAAPNDSGRPPPSLCSPAFPILGMTPALGSQAAGETLSTEAAQPCSTSQPPLLGDTNSLVNNSKQCNSSACSPKPDTNLQASGRQGQPACDSDSGPQATPLPVESFTFRENQLCGNACLELHEHSTEQTETADRPACDNLNPGNLQLVSELKNPSSSCSVDVSAMWWERAGAKEPCIVTACEDVVSLWKPLNSLQWEKVHTWHFTEVPVLQIVPVPDVYNLICVALGSLEIREIRALLCSSGDDSEKQVLLKSGDIKAMLGLTKRRLVSSTGTFCNQQIQIMTFADDGSSKDEQLLMPPDETVLTFAEVQGTQEALLGTTTVNSIVIWNLKTGQLLKKMHIDDSYQASVCHGAYSEKGLLFVVVSQPCAKESQALGSPVFQLLVINPKTAQSVGVLLCSLPQGQAGRFLEGDVKDHVAAAVLTSGTIAIWDLLLGHCTALLPPVSDQSWSLVKWSGTDSHLLAGQKDGNIFIYRYF

name	Palb2 (ENSMUSG00000044702) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Uniprot/SWISSPROT:Q3U0P1 RefSeq_peptide:NP_001276774 RefSeq_mRNA:NM_001289845.1 Vega_transcript:OTTMUST00000054271 Vega_transcript:Palb2-003 UCSC:uc012fth.2 Fantom:4732427B05 Fantom:F830038L21 EMBL:AK028653 EMBL:AK156701 EMBL:BC055302 EMBL:BC066140 GO:GO:0000724 GO:GO:0001701 GO:GO:0001756 GO:GO:0001833 GO:GO:0003677 GO:GO:0005654 GO:GO:0007498 GO:GO:0009887 GO:GO:0031052 GO:GO:0035264 GO:GO:0036342 GO:GO:0043066 GO:GO:0048568 MGI_trans_name:Palb2-003 Vega_translation:202430 Vega_translation:OTTMUSP00000025886 goslim_goa:GO:0003674 goslim_goa:GO:0003677 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0006259 goslim_goa:GO:0006950 goslim_goa:GO:0008150 goslim_goa:GO:0008283 goslim_goa:GO:0009790 goslim_goa:GO:0034641 goslim_goa:GO:0040007 goslim_goa:GO:0043226 goslim_goa:GO:0048646 goslim_goa:GO:0048856 goslim_goa:GO:0051276 protein_id:AAH55302.1 protein_id:AAH66140.1 protein_id:BAC26048.1 protein_id:BAE33811.1 OTTP:OTTMUSP00000025886 OTTT:OTTMUST00000054271 Reactome:R-MMU-419524 Reactome:R-MMU-73894 UniParc:UPI00001B3C81
definition	note : transcript_id=ENSMUST00000063587 protein_id : ENSMUSP00000063514 translation : MEELSGKPLSYAEKEKLKEKLAFLKKEYSRTLARLQTETADRPACDNLNPGNLQLVSELKNPSSSCSVDVSAMWWERAGAKEPCIVTACEDVVSLWKPLNSLQWEKVHTWHFTEVPVLQIVPVPDVYNLICVALGSLEIREIRALLCSSGDDSEKQVLLKSGDIKAMLGLTKRRLVSSTGTFCNQQIQIMTFADDGSSKDEQLLMPPDETVLTFAEVQGTQEALLGTTTVNSIVIWNLKTGQLLKKMHIDDSYQASVCHGAYSEKGLLFVVVSQPCAKESQALGSPVFQLLVINPKTAQSVGVLLCSLPQGQAGRFLEGDVKDHVAAAVLTSGTIAIWDLLLGHCTALLPPVSDQSWSLVKWSGTDSHLLAGQKDGNIFIYRYF

name	Palb2 (ENSMUSG00000044702) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	RefSeq_peptide:NP_001276771 RefSeq_peptide:NP_001276772.1 RefSeq_mRNA:NM_001289842.1 RefSeq_mRNA:NM_001289843.1 Vega_transcript:OTTMUST00000054272 Vega_transcript:Palb2-004 Uniprot/SPTREMBL:D3YVU6 UCSC:uc009jok.1 EMBL:AC124379 GO:GO:0000724 GO:GO:0001701 GO:GO:0001756 GO:GO:0001833 GO:GO:0003677 GO:GO:0005654 GO:GO:0007498 GO:GO:0009887 GO:GO:0031052 GO:GO:0035264 GO:GO:0036342 GO:GO:0043066 GO:GO:0048568 MGI_trans_name:Palb2-004 Vega_translation:202434 Vega_translation:OTTMUSP00000025887 goslim_goa:GO:0003674 goslim_goa:GO:0003677 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0006259 goslim_goa:GO:0006950 goslim_goa:GO:0008150 goslim_goa:GO:0008283 goslim_goa:GO:0009790 goslim_goa:GO:0034641 goslim_goa:GO:0040007 goslim_goa:GO:0043226 goslim_goa:GO:0048646 goslim_goa:GO:0048856 goslim_goa:GO:0051276 OTTP:OTTMUSP00000025887 OTTT:OTTMUST00000054272 UniParc:UPI00006059FA
definition	note : transcript_id=ENSMUST00000106468 protein_id : ENSMUSP00000102076 translation : MEELSGKPLSYAEKEKLKEKLAFLKKEYSRTLARLQRAKRAEKAKNSKKAIEDGVPQPEASSQLSHSESINKGFPCDTLQSNHLDEETGENISQILDVEPQSFNCKQGKEVLHTPRAGDIQGQLLHSTSSPDGKKEQNTLPGTTKTPWEKSSVSQEKEDYFDTNSLALLGKHRKGQESISRKNSRTPVSEKTHLLSLRSQIPDPPALVTGIGEGILIPPSGKSERGIDTLVRGNTVSAEAAVPSCTASNSNHSQHLEHTPPKSGCKITTQGPASSTNLVAQDQKMTIFTVNSVVYKAVRAHGQLPGSPNSCSVNDLTHSNLPANSTPNSKSLKSPSNTVDERNEPLQEDEILGPSKNFNLAAVSPPSTESQIHSCTMLEGLLFPAEYYVRTTRRMSDCQRKIALEAVIQSHLGVKKKELKKKTKATKAVVLSSEDTDQSESGMLDTSTGQSSSGSLSQKLLSPAEVSSPPGPAGKATTPPPGRGHRGKRKSARTSTLGHCQLLFPPCAALAVNRSKGKFTKHKCQNRGVVIHDFELPDEDFGLLKLEKLKSCSEKLIESPDSKNCGERLPREGNHAALEELQRDSETEGLEEELTVPPGEAYRPGPTLRRQPGSKDLSSSIVLFTPADTAAPNDSGRPPPSLCSPAFPILGMTPALGSQAAGETLSTEAAQPCSTSQPPLLGDTNSLVNNSKQCNSSACSPKPDTNLQASGRQGQPACDSDSGPQATPLPVESFTFRENQLCGNACLELHEHSTEQTETADRPACDNLNPGNLQLVSELKNPSSSCSVDVSAMWWERAGAKEPCIVTACEDVVSLWKPLNSLQWEKVHTWHFTEVPVLQIVPVPDVYNLICVALGSLEIREIRALLCSSGDDSEKQVLLKSGDIKAMLGLTKRRLVSSTGTFCNQQIQIMTFADDGSSKDEQLLMPPDETVLTFAEVQGTQEALLGTTTVNSIVIWNLKTGQLLKKMHIDDSYQASVCHGAYSEKVPCSPGWPAPVYVLSKMTLNLRFPASTSPVLGFLAQVRLSYNPID

name	Palb2 (ENSMUSG00000044702) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000054273 Vega_transcript:Palb2-005 Uniprot/SPTREMBL:D6RDD1 UCSC:uc009jok.1 EMBL:AC124379 GO:GO:0000724 GO:GO:0001701 GO:GO:0001756 GO:GO:0001833 GO:GO:0003677 GO:GO:0005654 GO:GO:0007498 GO:GO:0009887 GO:GO:0031052 GO:GO:0035264 GO:GO:0036342 GO:GO:0043066 GO:GO:0048568 MGI_trans_name:Palb2-005 Vega_translation:202433 Vega_translation:OTTMUSP00000030962 goslim_goa:GO:0003674 goslim_goa:GO:0003677 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0006259 goslim_goa:GO:0006950 goslim_goa:GO:0008150 goslim_goa:GO:0008283 goslim_goa:GO:0009790 goslim_goa:GO:0034641 goslim_goa:GO:0040007 goslim_goa:GO:0043226 goslim_goa:GO:0048646 goslim_goa:GO:0048856 goslim_goa:GO:0051276 OTTP:OTTMUSP00000030962 OTTT:OTTMUST00000054273 UniParc:UPI00006059F8
definition	note : transcript_id=ENSMUST00000142952 protein_id : ENSMUSP00000123041 translation : MEELSGKPLSYAEKEKLKEKLAFLKKEYSRTLARLQNL

name	Palb2 (ENSMUSG00000044702) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Uniprot/SWISSPROT:Q3U0P1 Vega_transcript:OTTMUST00000054274 Vega_transcript:Palb2-006 UCSC:uc009jom.1 Fantom:4732427B05 Fantom:F830038L21 EMBL:AK028653 EMBL:AK156701 EMBL:BC055302 EMBL:BC066140 GO:GO:0000724 GO:GO:0001701 GO:GO:0001756 GO:GO:0001833 GO:GO:0003677 GO:GO:0005654 GO:GO:0007498 GO:GO:0009887 GO:GO:0031052 GO:GO:0035264 GO:GO:0036342 GO:GO:0043066 GO:GO:0048568 MGI_trans_name:Palb2-006 Vega_translation:202435 Vega_translation:OTTMUSP00000045934 goslim_goa:GO:0003674 goslim_goa:GO:0003677 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0006259 goslim_goa:GO:0006950 goslim_goa:GO:0008150 goslim_goa:GO:0008283 goslim_goa:GO:0009790 goslim_goa:GO:0034641 goslim_goa:GO:0040007 goslim_goa:GO:0043226 goslim_goa:GO:0048646 goslim_goa:GO:0048856 goslim_goa:GO:0051276 protein_id:AAH55302.1 protein_id:AAH66140.1 protein_id:BAC26048.1 protein_id:BAE33811.1 OTTP:OTTMUSP00000045934 OTTT:OTTMUST00000054274 Reactome:R-MMU-419524 Reactome:R-MMU-73894 UniParc:UPI0000027367
definition	note : transcript_id=ENSMUST00000130149 protein_id : ENSMUSP00000121994 translation : MEELSGKPLSYAEKEKLKEKLAFLKKEYSRTLARLQRAKRAEKAKNSKKAIEDGVPQPEASSQLSHSESINKGFPCDTLQSNHLDEETGENISQILDVEPQSFNCKQGKEVLHTPRAGDIQGQLLHSTSSPDGKKEQNTLPGTTKTPWEKSSVSQEKEDYFDTNSLALLGKHRKGQESISRKNSRTPVSEKTHLLSLRSQIPDPPALVTGIGEGILIPPSGKSERGIDTLVRGNTVSAEAAVPSCTASNSNHSQHLEHTPPKSGCKITTQGPASSTNLVAQDQKMTIFTVNSVVYKAVRAHGQLPGSPNSCSVNDLTHSNLPANSTPNSKSLKSPSNTVDERNEPLQEDEILGPSKNFNLAAVSPPSTESQIHSCTMLEGLLFPAEYYVRTTRRMSDCQRKIALEAVIQSHLGVKKKELKKKTKATKAVVLSSEDTDQSESGMLDTSTGQSSSGSLSQKLLSPAEVSSPPGPAGKATTPPPGRGHRGKRKSARTSTLGHCQLLFPPCAALAVNRSKGKFTKHKCQNRGVVIHGKSRRRVRLRLM

name	Dctn5 (ENSMUSG00000030868) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS21811.1 Uniprot/SWISSPROT:Q9QZB9 RefSeq_peptide:NP_067621 RefSeq_mRNA:NM_021608.3 Vega_transcript:Dctn5-001 Vega_transcript:OTTMUST00000054251 UCSC:uc009jon.2 Fantom:2310081F19 Fantom:2810020F19 Fantom:4930427E12 Fantom:D230024C15 Fantom:I830026K10 Fantom:I830041H04 Fantom:I920070C15 EMBL:AF190795 EMBL:AK010238 EMBL:AK051957 EMBL:AK076100 EMBL:AK076738 EMBL:AK151193 EMBL:AK151876 EMBL:AK168983 EMBL:BC005671 EMBL:BC010834 GO:GO:0000777 GO:GO:0003674 GO:GO:0005515 GO:GO:0005737 GO:GO:0005813 GO:GO:0005813 GO:GO:0008150 MGI_trans_name:Dctn5-001 Vega_translation:202436 Vega_translation:OTTMUSP00000025873 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005694 goslim_goa:GO:0005737 goslim_goa:GO:0005815 goslim_goa:GO:0005856 goslim_goa:GO:0008150 goslim_goa:GO:0043226 goslim_goa:GO:0043234 protein_id:AAF05615.1 protein_id:AAH05671.1 protein_id:AAH10834.1 protein_id:BAB26789.1 protein_id:BAC34820.1 protein_id:BAC36183.1 protein_id:BAC36460.1 protein_id:BAE30190.1 protein_id:BAE30763.1 protein_id:BAE40783.1 OTTP:OTTMUSP00000025873 OTTT:OTTMUST00000054251 Reactome:R-MMU-1280218 Reactome:R-MMU-168256 Reactome:R-MMU-2132295 UniParc:UPI0000023610
definition	note : transcript_id=ENSMUST00000033156 protein_id : ENSMUSP00000033156 translation : MELGELLYNKSEYIETASGNKVSRQSVLCGSQNIVLNGKTIIMNDCIIRGDLANVRVGRHCVVKSRSVIRPPFKKFSKGVAFFPLHIGDHVFIEEDCVVNAAQIGSYVHVGKNCVIGRRCVLKDCCKILDNTVLPPETVVPPFTVFSGCPGLFSGELPECTQELMIDVTKSYYQKFLPLTQV

name	Dctn5 (ENSMUSG00000030868) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:Dctn5-003 Vega_transcript:OTTMUST00000111073 Uniprot/SPTREMBL:H3BJ75 EMBL:AC124379 GO:GO:0003674 GO:GO:0005813 GO:GO:0008150 MGI_trans_name:Dctn5-003 Vega_translation:202437 Vega_translation:OTTMUSP00000062077 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005815 goslim_goa:GO:0005856 goslim_goa:GO:0008150 goslim_goa:GO:0043226 OTTP:OTTMUSP00000062077 OTTT:OTTMUST00000111073 UniParc:UPI0002467690
definition	note : transcript_id=ENSMUST00000176193 protein_id : ENSMUSP00000134876 translation : MELGELLYNKSEYIETVRVWRPCRRWQSRDPRGLDGRPSRPGCTGSRSLSPFLG

name	Dctn5 (ENSMUSG00000030868) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:Dctn5-004 Vega_transcript:OTTMUST00000111074 Uniprot/SPTREMBL:H3BKU6 EMBL:AC124379 GO:GO:0003674 GO:GO:0005813 GO:GO:0008150 MGI_trans_name:Dctn5-004 Vega_translation:202438 Vega_translation:OTTMUSP00000062078 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005815 goslim_goa:GO:0005856 goslim_goa:GO:0008150 goslim_goa:GO:0043226 OTTP:OTTMUSP00000062078 OTTT:OTTMUST00000111074 UniParc:UPI0002467691
definition	note : transcript_id=ENSMUST00000176295 protein_id : ENSMUSP00000135530 translation : CCKILDNTVLPPETVVPPFTVFSGCPENHGSIPSTHMITHSCP

name
type	STS
link
xref	UniSTS_NUM:163027 UniSTS:RH126319 UniSTS:C78178
definition	note : map_weight=1 standard_name : RH126319

name
type	misc_feature
link
xref
definition	note : contig AC124379.3 1..132973(-1)

name
type	misc_feature
link
xref
definition	note : contig AC122232.3 1..154461(-1)

name	Gm16326 (ENSMUSG00000089631)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000084835 Vega_transcript:OTTMUST00000084835 Clone_based_vega_transcript:AC124379.6-001 MGI_trans_name:Gm16326-001 OTTT:OTTMUST00000084835
definition	note : processed_pseudogene note : transcript_id=ENSMUST00000162843

name	Dctn5 (ENSMUSG00000030868)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000054252 Vega_transcript:OTTMUST00000054252 MGI_trans_name:Dctn5-002 OTTT:OTTMUST00000054252
definition	note : retained_intron note : transcript_id=ENSMUST00000123602

name	Gm15489 (ENSMUSG00000086942)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000054253 Vega_transcript:OTTMUST00000054253 Clone_based_vega_transcript:AC122232.2-001 MGI_trans_name:Gm15489-001 OTTT:OTTMUST00000054253 RNACentral:URS0000760807
definition	note : antisense note : transcript_id=ENSMUST00000132811

Polymorphisms Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Dctn5 (ENSMUSG00000030868)
Transcript ID	ENSMUST00000033156

Reports
substitution
cSNPs	2
Insertion	24
Deletion	27
SNPs	-1kb 122128046(c.-5088C>T), 122128053(c.-5081C>T), 122128055(c.-5079G>C), 122128082(c.-5052C>T), 122128103(c.-5031C>A), 122128114(c.-5020A>T), 122128118(c.-5016T>C), 122128148(c.-4986C>A), 122128242(c.-4892T>C), 122128276(c.-4858G>A), 122128321(c.-4813T>G), 122128459(c.-4675A>T), 122128945(c.-4189A>G), 122128975(c.-4159G>T), 122128977(c.-4157C>T), 122129593(c.-3541G>A), 122129868(c.-3266G>C), 122129946(c.-3188T>C), 122130054(c.-3080A>G), 122130069(c.-3065G>A), 122130184(c.-2950T>C), 122130206(c.-2928C>A), 122130278(c.-2856C>T), 122130287(c.-2847T>A), 122130363(c.-2771T>A), 122130375(c.-2759T>C), 122130402(c.-2732G>A), 122130588(c.-2546T>C), 122130589(c.-2545G>A), 122130610(c.-2524T>C), 122130649(c.-2485C>T), 122130666(c.-2468G>T), 122130715(c.-2419C>T), 122130749(c.-2385T>G), 122130801(c.-2333C>G), 122130963(c.-2171C>T), 122130965(c.-2169T>C), 122130973(c.-2161T>C), 122130982(c.-2152A>C), 122130983(c.-2151A>C), 122130987(c.-2147A>G), 122131143(c.-1991A>G), 122131300(c.-1834A>C), 122131416(c.-1718C>T), 122131461(c.-1673A>T), 122131618(c.-1516C>T), 122131663(c.-1471T>C), 122131666(c.-1468T>G), 122131793(c.-1341C>T), 122131954(c.-1180C>G), 122131994(c.-1140A>C), 122132001(c.-1133C>T), 122132180(c.-954T>A), 122132367(c.-767T>C), 122132555(c.-579A>T), 122132570(c.-564C>T), 122132640(c.-494A>T), 122132784(c.-350C>T), 122132785(c.-349G>A), 122132846(c.-288A>G), 122132866(c.-268G>A), 122132874(c.-260G>A), 122132931(c.-203G>C), 122133004(c.-130C>G), 122133005(c.-129T>C), 122133020(c.-114T>C), 122133026(c.-108G>A), 5'UTR 122133085(c.-49G>T), 122133088(c.-46T>A), 122133129(c.-5A>C), CDS 122133172(c.39C>T), 122135120(c.186C>T), 3'UTR 122148218(c.64C>A), 122148413(c.259G>A), 122148478(c.324T>C), 122148534(c.380T>C), 122148759(c.605A>G), 122148782(c.628G>A), 122148853(c.699A>G), INTRON 122133251(c.48+70C>T), 122133351(c.48+170C>A), 122133432(c.48+251C>G), 122133550(c.48+369A>G), 122133656(c.48+475T>C), 122133860(c.49-309T>C), 122133879(c.49-290G>A), 122133914(c.49-255G>A), 122133985(c.49-184C>T), 122134054(c.49-115A>C), 122134437(c.117+200T>C), 122134438(c.117+201A>G), 122134532(c.117+295C>T), 122134653(c.118-399A>G), 122134799(c.118-253T>G), 122134808(c.118-244A>G), 122134900(c.118-152A>G), 122134948(c.118-104T>A), 122134958(c.118-94A>G), 122135238(c.236+68A>T), 122135337(c.236+167A>G), 122135361(c.236+191C>T), 122135368(c.236+198C>G), 122135409(c.236+239A>G), 122135420(c.236+250G>A), 122135598(c.236+428A>T), 122135604(c.236+434A>T), 122135672(c.236+502G>A), 122135693(c.236+523T>C), 122135694(c.236+524G>A), 122135741(c.236+571G>A), 122135764(c.236+594A>G), 122135779(c.236+609G>A), 122135814(c.236+644C>G), 122135907(c.236+737A>T), 122135909(c.236+739C>A), 122136100(c.236+930A>G), 122136185(c.236+1015C>T), 122136216(c.236+1046T>C), 122136244(c.236+1074G>A), 122136325(c.236+1155G>A), 122136657(c.236+1487A>G), 122136729(c.237-1519C>A), 122136736(c.237-1512T>A), 122136759(c.237-1489T>A), 122138136(c.237-112T>C), 122138158(c.237-90A>C), 122138229(c.237-19G>A), 122138557(c.348+198T>C), 122138558(c.348+199G>A), 122138650(c.348+291C>T), 122138798(c.348+439A>G), 122138814(c.348+455T>A), 122138845(c.348+486A>G), 122138921(c.348+562G>A), 122139097(c.348+738C>T), 122139658(c.348+1299C>T), 122139757(c.348+1398G>A), 122139795(c.348+1436C>A), 122139913(c.348+1554A>G), 122139963(c.348+1604G>T), 122140020(c.348+1661C>G), 122140029(c.348+1670C>T), 122140043(c.348+1684T>A), 122140148(c.348+1789G>A), 122140423(c.348+2064G>A), 122140629(c.348+2270C>G), 122140639(c.348+2280T>G), 122140663(c.348+2304A>G), 122140678(c.348+2319T>C), 122140711(c.348+2352T>C), 122140752(c.348+2393A>G), 122140758(c.348+2399T>G), 122140956(c.348+2597T>G), 122141026(c.348+2667C>T), 122141055(c.348+2696A>T), 122141097(c.349-2688A>T), 122141237(c.349-2548G>A), 122141312(c.349-2473T>A), 122141317(c.349-2468A>C), 122141359(c.349-2426C>A), 122141456(c.349-2329C>T), 122141499(c.349-2286A>G), 122141500(c.349-2285T>G), 122141537(c.349-2248C>T), 122141666(c.349-2119A>T), 122141761(c.349-2024C>A), 122141786(c.349-1999C>T), 122141814(c.349-1971G>C), 122141875(c.349-1910T>C), 122141984(c.349-1801G>A), 122142062(c.349-1723A>G), 122142111(c.349-1674A>G), 122142231(c.349-1554C>T), 122142274(c.349-1511G>C), 122142357(c.349-1428G>A), 122142378(c.349-1407A>G), 122142403(c.349-1382A>G), 122142453(c.349-1332G>A), 122142627(c.349-1158A>G), 122142636(c.349-1149T>C), 122142637(c.349-1148T>A), 122142659(c.349-1126A>C), 122143033(c.349-752C>T), 122143064(c.349-721C>T), 122143102(c.349-683G>A), 122143125(c.349-660T>A), 122143139(c.349-646T>C), 122143245(c.349-540C>A), 122143266(c.349-519C>A), 122143277(c.349-508C>T), 122143389(c.349-396G>A), 122143412(c.349-373T>C), 122143527(c.349-258A>T), 122143914(c.451+27T>C), 122143948(c.451+61T>G), 122144029(c.451+142A>G), 122144090(c.451+203A>G), 122144282(c.451+395A>T), 122144338(c.451+451C>T), 122144445(c.451+558A>G), 122144448(c.451+561A>G), 122144541(c.451+654C>T), 122144543(c.451+656T>C), 122144633(c.451+746T>G), 122145030(c.451+1143A>G), 122145221(c.451+1334C>T), 122145255(c.451+1368G>C), 122145264(c.451+1377G>C), 122145533(c.451+1646T>C), 122145573(c.451+1686T>C), 122145628(c.451+1741C>T), 122145662(c.451+1775A>G), 122145956(c.451+2069C>G), 122145968(c.451+2081T>A), 122146098(c.452-1959G>A), 122146182(c.452-1875C>A), 122146190(c.452-1867C>T), 122146208(c.452-1849G>T), 122146333(c.452-1724C>A), 122146374(c.452-1683A>G), 122146385(c.452-1672T>C), 122146556(c.452-1501A>G), 122146599(c.452-1458C>T), 122146622(c.452-1435A>G), 122146692(c.452-1365G>A), 122146810(c.452-1247T>C), +1kb 122149127(c.973C>G), 122149315(c.1161A>G), 122149332(c.1178C>T), 122149414(c.1260T>G), 122149671(c.1517C>G), 122149995(c.1841G>A), 122150035(c.1881C>T), 122150044(c.1890T>A), 122150145(c.1991A>C), 122150147(c.1993T>C), 122150151(c.1997T>C), 122150210(c.2056C>T), 122150484(c.2330A>G), 122150519(c.2365A>G), 122150565(c.2411T>C), 122150586(c.2432A>C), 122150590(c.2436C>T), 122150599(c.2445G>C), 122150619(c.2465C>T), 122151303(c.3149C>G), 122151305(c.3151T>C), 122151394(c.3240A>T), 122151401(c.3247C>A), 122151417(c.3263C>T), 122151430(c.3276A>C), 122151443(c.3289A>G), 122151676(c.3522C>T), 122151752(c.3598T>A), 122151763(c.3609C>A), 122151941(c.3787C>A), 122152063(c.3909C>A), 122152167(c.4013G>A), 122152471(c.4317T>C), 122152473(c.4319G>T), 122152529(c.4375T>G), 122152687(c.4533A>G), 122152740(c.4586T>C), 122152744(c.4590A>G), 122152852(c.4698C>T), 122152988(c.4834A>G), 122153067(c.4913A>G), 122153114(c.4960T>C), 122153180(c.5026C>T), 122153351(c.5197C>T), 122153382(c.5228C>T), 122153390(c.5236C>T), 122153391(c.5237T>G), 122153424(c.5270G>A), 122153455(c.5301A>G), 122153456(c.5302T>C), 122153572(c.5418G>A), 122153585(c.5431T>C), 122153651(c.5497C>A), 122153680(c.5526A>G), 122153720(c.5566A>G), 122153742(c.5588C>T), 122153801(c.5647T>C), 122153995(c.*5841T>C),
Insertions	-1kb 122130379 (c.-2755_-2754insTT), 122130728 (c.-2406_-2405insC), 122131879 (c.-1255_-1254insACA), 122132003 (c.-1132_-1131dupCT), 5'UTR CDS 3'UTR 122148830 (c.677_678dupAA), INTRON 122134136 (c.49-27dupT), 122134360 (c.117+130dupT), 122136008 (c.236+842_236+843insATCTAGCT), 122138434 (c.348+78_348+79insCCCTGT), 122139971 (c.348+1614dupG), 122140249 (c.348+1890_348+1891insGGTCAGT), 122140922 (c.348+2565_348+2566insTTT), 122141196 (c.349-2588_349-2587dupTG), 122142569 (c.349-1216_349-1215insCT), 122143099 (c.349-686_349-685insTA), 122144655 (c.451+770_451+774dupAGCAC), 122144755 (c.451+868_451+869insCTTT), 122145546 (c.451+1662dupC), 122146515 (c.452-1538_452-1537insAACTA), 122147028 (c.452-1029_452-1028insGGTT), +1kb 122149327 (c.1173_1174insAG), 122151476 (c.3322_3323insCCTG), 122151681 (c.3527_3528insA), 122153151 (c.4997_4998insAG),
Deletions	-1kb 122129343 (c.-3790delT), 122130233 (c.-2900_-2899delCA), 122130272 (c.-2861delT), 5'UTR CDS 3'UTR 122148189 (c.36_37delTT), 122148256 (c.103delC), 122148287 (c.134_135delTC), INTRON 122133560 (c.48+384delT), 122133898 (c.49-258_49-257delCC), 122134619 (c.117+389delA), 122137084 (c.237-1160_237-1159delAA), 122140235 (c.348+1877delA), 122142641 (c.349-1143delT), 122142737 (c.349-1047delA), 122142932 (c.349-852delT), 122143425 (c.349-346_349-343delACAC), 122146241 (c.452-1815delA), 122146356 (c.452-1700_452-1693delTATTTTCA), 122146899 (c.452-1157_452-1156delCC), 122147039 (c.452-1017_452-1015delTTG), +1kb 122150420 (c.2267_2271delTTAGA), 122150637 (c.2484_2485delCG), 122151263 (c.3110_3111delCC), 122151377 (c.3224_3228delTGTTC), 122152396 (c.4243delA), 122152413 (c.4260_4261delAC), 122152431 (c.4278_4281delCTTT), 122153934 (c.*5781delT),
coding sequence substitutions
premature termination by the nucleotide substitution	0
synonymous num	2
non-synonymous num	0
synonymous substitutions	122133172 (p.Tyr13Tyr), 122135120 (p.Val62Val),
non-synonymous substitutions
B6 transcript (ENSMUST00000033156)	MELGELLYNKSEYIETASGNKVSRQSVLCGSQNIVLNGKTIIMNDCIIRGDLANVRVGRH CVVKSRSVIRPPFKKFSKGVAFFPLHIGDHVFIEEDCVVNAAQIGSYVHVGKNCVIGRRC VLKDCCKILDNTVLPPETVVPPFTVFSGCPGLFSGELPECTQELMIDVTKSYYQKFLPLT QV*
MSMv4 transcript	MELGELLYNKSEYIETASGNKVSRQSVLCGSQNIVLNGKTIIMNDCIIRGDLANVRVGRH CVVKSRSVIRPPFKKFSKGVAFFPLHIGDHVFIEEDCVVNAAQIGSYVHVGKNCVIGRRC VLKDCCKILDNTVLPPETVVPPFTVFSGCPGLFSGELPECTQELMIDVTKSYYQKFLPLT QV*
homology	100.00 (183 / 183)

Exon Detail Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Dctn5 (ENSMUSG00000030868)
Transcript ID	ENSMUST00000033156


..........ATCTTGTTTATTTGTAAATGATCTTTACCACCCTTAGAAGGTAAGACAGG
ATAGGAAGACAAATTAATGTGAATTCTAATTTTGCACAGAAAGCACAAGAACATGGAAGT
AATATTTAAGTCTTGCAGGAGAATAATATACTGAGCCTGAAAGAAATGAGAGCTCCTTCT
AACTACTACACTAAATTTGTATGCACACACACAACACCTGTTCATTATATGTAATATTTA
TATTATTTTCTTCCCCTCATCTTGTTCCAACGTGGGTCTTAAACATGGAGAACACCAGCT
GCAGAACCAACCAGAGTACACGTTATAACCATCCCCCTCTCCAATGTAAACCTATTTTGG
AGGTCAAGCCCTAACAGACAAACACGAAAATGTATATATATAAGGCTGTTGACGTGACGT
GAAAGATTTATGTGACGGGGCCGGAGTGGAGTGGGAGAGAAGAGGGCCTCTAGGTTTACC
TATATGTAGTTTTACACCTAATATTTATGCAGTGCCACTAGAAGTTGGGTTTGGCTCGTT
TGCATTTTAAGCTTCGCCACCCGAGCAGCGCGCTCGTCTCAGTGACTTCTCGTGGAGGCT
GTAGGTAGGTGGACACTGCCTCGGATACAGGAACTAGGTTTGAAAACCCAGCCTAAAGCC
CTGGGTCACCCTTCCCGCAACCCGGGCACCTTTTCCTTCTCCGCATAGCTGAGGGGCTTC
CCGGAAAGCTCTTCCATCGGGTTGGAAGCCGAATACAAGGAGCAGCCGTCTCCAGCCTCG
GGCCTGTGGTCACGGGGACCCAGCCAGGGCTTCCTGGGGCCAAGAGGAACCCCTGAGAAG
AACAGGGACCTAGTTCACCCCCACTATGTTCCTGCCGAGCCACACAGGTTCCGCGCGCTA
CCCGCTCTGGCCAATTAAAACCTCTGTTCGCTCTGCGCACGCGCAGCTGGAGACTGCCGA
GCGATCGAGCAGGGCTGACTAGAGGAGAGCCGAATAAGAGTCCAGGGCGG
GGATAGCGGAAGTGGCCGATCAACCGGAAGTAGCTGGAATCACCTTCAGCCTGAGCTACTGACAGGATCCTGAGGTTCAGAGAGGGGGCAGCCATGGAGTTGGGCGAACTGCTGTACAACAAGTCGGAGTATATCGAGACG
GTGCGCGTGTGGCGACCCTGCCGCC..........ACTCCAGATTTCTGTTTGCTTTTAG
GCATCTGGGAACAAAGTTAGTCGCCAGTCTGTTTTGTGTGGAAGCCAGAACATCGTCCTCAATGGCAAG
GTAAAGGGCACAGGCAGCTTCAGGA..........TTTTTACACGTGTTTTGCTTTATAG
ACCATTATAATGAATGACTGTATCATCCGAGGAGACCTGGCAAATGTAAGAGTTGGACGTCACTGTGTTGTGAAAAGCCGTAGTGTCATAAGGCCACCGTTCAAAAAATTCAGCAAAGG
GTATGTGACTTAATTACCTGTTTGC..........TGATTCATCTTCTTTTCCTTTTTAG
TGTTGCATTCTTTCCTCTGCATATTGGGGATCATGTCTTTATCGAGGAAGACTGTGTGGTCAACGCTGCCCAGATTGGTTCTTATGTTCACGTTGGGAAGAACTGTGTGATT
GTAAGTATAGGATTCTCTCAGCTAA..........CCTATTAATGAGATTATAATTTCAG
GGGCGCCGTTGTGTATTGAAAGACTGCTGCAAAATTCTCGACAATACAGTATTACCCCCAGAAACTGTGGTCCCCCCATTCACTGTCTTCTCCGGCTGCCCAG
GTAATGTTGATGTTAATATGTCTGT..........CTTGACTGGGTCTCTCTTTTCTCAG
GACTCTTCTCAGGGGAGCTCCCAGAGTGCACACAGGAGCTGATGATTGACGTCACCAAAAGCTACTACCAGAAGTTTCTACCCCTAACACAAGTCTAATGTCTCTGCTTCATATCTTTAATTCTTTTGAACTCTTAAGACGAACCTGGAGATAAAGAGAGCAGCCAGTGACTACAAGAGCTGTCCTGTTTTTGACAACTTCTACTCTCCCGTTGTTGGCTTTTTTTTTTTTTCAATTTTCCATGGCTCTGAGCATTTAAGAATTTAATAAGGCTAGAGAGATGGCTCAGTGGTTAAGCATGCTGGTTGCTCTTCCAGAGGACCCAGGTTCAGTTCCCAGCACTCACATGGCCCTACAACCATCTATTACTCCAGTTCCAGAGGATCTGATGGGTTTCTGGCTTCCATGGTCACCAGACATACATGTGGTAAAGACATATGCAGCCAAAATATCCTACACACCTAATCTGTCAACAGTCGCCATACCATCGTCTGAGGAGGACAGAAAGGTCTGTTCCTGACACTCTAGCCCTGTGGTTCTGCAGATGGTTGGAACCTGCCTGGCTTGGGCCTACAGAGCAACAGCACCCTCCCAGCATGGAGTCACATGACCCAAGTACTGCTCAGAACCCTGTCCTATCCCCAGGCTACACAGTCCACACAGATGACAGGCCACTTTCCTGCTGCTAAGATGGGACCAATAGCCACAATTTCTTGTGCCCTGGGAAAAGTGTGATTTCAGGCCCAGGTTCCTATTGGTGGTTAGAACATGAGGAAGAGACAGGCTGTGGTGACGTGTACCCATCCTCGTACCTGGGAGGTAGAGGCAGGAGGAATAGGAGCTACATAGTGAGCTCACACTTGCCTGGTGGGCTACATGAGACCCTGCTTCAAAACAACAAAAATAAAGTCAGTAAAAATAAGTGGTATCTGTTGTTTTAAGGTGGCCTTAGTTGTCCTATAGTAGCTAATAAAAGACGTAAAACATC
CTGGTTTAGGCTCATTCATTAAAGAGGGGACCCTACACTGCAGACTGTGCTTCTGCAAAA
TCCCAGGTTTAGGTCTTCAGTGGGGATGGCTTAGTCAGGTCCTCATTCCTTGACTCAAGG
ATTACTTCACCAAAAATGAGTGTCCGTGAGCCTTGCTCTCTAGCCTAGATGCATTTGTCC
TGTGTGGAATTTGTTAACACTCCCATGCTTCAGACTAAAATATTTGTACTTGAGGTCAGC
CTCACATTTGCATGAGAGGCTTTTTAAGTCGTCCTGTGGACACAGCCCGAGGAAGCGGCA
TTGCCAGTGCCCCTAACTGGTTCTGCTCAGAGTCCTCGGTTTAGAGGTGAAGGGCTTGGT
CCATTGAGTGCTCTCAGACAGTGGCCAAACAGTTCAGCACTGAAGGGCAAGACCCAGCAG
GGGCCTCCTTGATGTCCAGCTTGGTGGGGTTGGCAGGAAAACCTGAGTGCACTTGACTCT
AATCCAATTCAGAATGCTTTCTGTTTGTCATTTGTCATTTTTTCATGTGTTACCAACGAG
TCCAAAATGGTTGCTTCTTCCTGTCTATTGGTCTAGTCAGCATGATGTTGTCAATATAAT
GAACCAATGTGATATTTTGTGGAAGAGACAGAGGATCAAGATCCCTTCAAGCTGTGTTAT
GACTTAGGGCTGGAGAGTTACTATTTCCTTGAGGTAAAACTGAAGGTATTCTGCAGGCTT
TGGCAATTGAAAGCAAATTGCTTCTGGTGGTCTTTATGGATGGGCATTTGTTAGATGTTT
TAGTCAGGGTTTCTGCTGCTGCTAGAAAACACCATGACCAAAAAAACAAGTTGGGGAGGA
AAGGGTTTATTCATCTTACACTTCCATATTGCTGTTTATCAACAAAGGAAGTCAGGACAG
GAACTCAATCAGGGCAGGAACCTGGAGGCAGGAGCTGATGCAGAGGCCATAGAGGGGTGC
TGCTTATTGGCTTTCTCCCCGTGGCTTGCTTAGCCTGCTA..........

No.	Exon / Intron	Start	End	Start Phase	End Phase	Length	Sequence
	5' upstream sequence						..........ATCTTGTTTATTTGTAAATGATCTTTACCACCCTTAGAAGGTAAGACAGG ATAGGAAGACAAATTAATGTGAATTCTAATTTTGCACAGAAAGCACAAGAACATGGAAGT AATATTTAAGTCTTGCAGGAGAATAATATACTGAGCCTGAAAGAAATGAGAGCTCCTTCT AACTACTACACTAAATTTGTATGCACACACACAACACCTGTTCATTATATGTAATATTTA TATTATTTTCTTCCCCTCATCTTGTTCCAACGTGGGTCTTAAACATGGAGAACACCAGCT GCAGAACCAACCAGAGTACACGTTATAACCATCCCCCTCTCCAATGTAAACCTATTTTGG AGGTCAAGCCCTAACAGACAAACACGAAAATGTATATATATAAGGCTGTTGACGTGACGT GAAAGATTTATGTGACGGGGCCGGAGTGGAGTGGGAGAGAAGAGGGCCTCTAGGTTTACC TATATGTAGTTTTACACCTAATATTTATGCAGTGCCACTAGAAGTTGGGTTTGGCTCGTT TGCATTTTAAGCTTCGCCACCCGAGCAGCGCGCTCGTCTCAGTGACTTCTCGTGGAGGCT GTAGGTAGGTGGACACTGCCTCGGATACAGGAACTAGGTTTGAAAACCCAGCCTAAAGCC CTGGGTCACCCTTCCCGCAACCCGGGCACCTTTTCCTTCTCCGCATAGCTGAGGGGCTTC CCGGAAAGCTCTTCCATCGGGTTGGAAGCCGAATACAAGGAGCAGCCGTCTCCAGCCTCG GGCCTGTGGTCACGGGGACCCAGCCAGGGCTTCCTGGGGCCAAGAGGAACCCCTGAGAAG AACAGGGACCTAGTTCACCCCCACTATGTTCCTGCCGAGCCACACAGGTTCCGCGCGCTA CCCGCTCTGGCCAATTAAAACCTCTGTTCGCTCTGCGCACGCGCAGCTGGAGACTGCCGA GCGATCGAGCAGGGCTGACTAGAGGAGAGCCGAATAAGAGTCCAGGGCGG
1	EXON 1	122133041	122133181	-	0	141	GGATAGCGGAAGTGGCCGATCAACCGGAAGTAGCTGGAATCACCTTCAGCCTGAGCTACT GACAGGATCCTGAGGTTCAGAGAGGGGGCAGCCATGGAGTTGGGCGAACTGCTGTACAAC AAGTCGGAGTATATCGAGACG
	INTRON 1 - 2	122133182	122134168			987	GTGCGCGTGTGGCGACCCTGCCGCC..........ACTCCAGATTTCTGTTTGCTTTTAG
2	EXON 2	122134169	122134237	0	0	69	GCATCTGGGAACAAAGTTAGTCGCCAGTCTGTTTTGTGTGGAAGCCAGAACATCGTCCTC AATGGCAAG
	INTRON 2 - 3	122134238	122135051			814	GTAAAGGGCACAGGCAGCTTCAGGA..........TTTTTACACGTGTTTTGCTTTATAG
3	EXON 3	122135052	122135170	0	2	119	ACCATTATAATGAATGACTGTATCATCCGAGGAGACCTGGCAAATGTAAGAGTTGGACGT CACTGTGTTGTGAAAAGCCGTAGTGTCATAAGGCCACCGTTCAAAAAATTCAGCAAAGG
	INTRON 3 - 4	122135171	122138247			3077	GTATGTGACTTAATTACCTGTTTGC..........TGATTCATCTTCTTTTCCTTTTTAG
4	EXON 4	122138248	122138359	2	0	112	TGTTGCATTCTTTCCTCTGCATATTGGGGATCATGTCTTTATCGAGGAAGACTGTGTGGT CAACGCTGCCCAGATTGGTTCTTATGTTCACGTTGGGAAGAACTGTGTGATT
	INTRON 4 - 5	122138360	122143784			5425	GTAAGTATAGGATTCTCTCAGCTAA..........CCTATTAATGAGATTATAATTTCAG
5	EXON 5	122143785	122143887	0	1	103	GGGCGCCGTTGTGTATTGAAAGACTGCTGCAAAATTCTCGACAATACAGTATTACCCCCA GAAACTGTGGTCCCCCCATTCACTGTCTTCTCCGGCTGCCCAG
	INTRON 5 - 6	122143888	122148056			4169	GTAATGTTGATGTTAATATGTCTGT..........CTTGACTGGGTCTCTCTTTTCTCAG
6	EXON 6	122148057	122149044	1	-	988	GACTCTTCTCAGGGGAGCTCCCAGAGTGCACACAGGAGCTGATGATTGACGTCACCAAAA GCTACTACCAGAAGTTTCTACCCCTAACACAAGTCTAATGTCTCTGCTTCATATCTTTAA TTCTTTTGAACTCTTAAGACGAACCTGGAGATAAAGAGAGCAGCCAGTGACTACAAGAGC TGTCCTGTTTTTGACAACTTCTACTCTCCCGTTGTTGGCTTTTTTTTTTTTTCAATTTTC CATGGCTCTGAGCATTTAAGAATTTAATAAGGCTAGAGAGATGGCTCAGTGGTTAAGCAT GCTGGTTGCTCTTCCAGAGGACCCAGGTTCAGTTCCCAGCACTCACATGGCCCTACAACC ATCTATTACTCCAGTTCCAGAGGATCTGATGGGTTTCTGGCTTCCATGGTCACCAGACAT ACATGTGGTAAAGACATATGCAGCCAAAATATCCTACACACCTAATCTGTCAACAGTCGC CATACCATCGTCTGAGGAGGACAGAAAGGTCTGTTCCTGACACTCTAGCCCTGTGGTTCT GCAGATGGTTGGAACCTGCCTGGCTTGGGCCTACAGAGCAACAGCACCCTCCCAGCATGG AGTCACATGACCCAAGTACTGCTCAGAACCCTGTCCTATCCCCAGGCTACACAGTCCACA CAGATGACAGGCCACTTTCCTGCTGCTAAGATGGGACCAATAGCCACAATTTCTTGTGCC CTGGGAAAAGTGTGATTTCAGGCCCAGGTTCCTATTGGTGGTTAGAACATGAGGAAGAGA CAGGCTGTGGTGACGTGTACCCATCCTCGTACCTGGGAGGTAGAGGCAGGAGGAATAGGA GCTACATAGTGAGCTCACACTTGCCTGGTGGGCTACATGAGACCCTGCTTCAAAACAACA AAAATAAAGTCAGTAAAAATAAGTGGTATCTGTTGTTTTAAGGTGGCCTTAGTTGTCCTA TAGTAGCTAATAAAAGACGTAAAACATC
	3' upstream sequence						CTGGTTTAGGCTCATTCATTAAAGAGGGGACCCTACACTGCAGACTGTGCTTCTGCAAAA TCCCAGGTTTAGGTCTTCAGTGGGGATGGCTTAGTCAGGTCCTCATTCCTTGACTCAAGG ATTACTTCACCAAAAATGAGTGTCCGTGAGCCTTGCTCTCTAGCCTAGATGCATTTGTCC TGTGTGGAATTTGTTAACACTCCCATGCTTCAGACTAAAATATTTGTACTTGAGGTCAGC CTCACATTTGCATGAGAGGCTTTTTAAGTCGTCCTGTGGACACAGCCCGAGGAAGCGGCA TTGCCAGTGCCCCTAACTGGTTCTGCTCAGAGTCCTCGGTTTAGAGGTGAAGGGCTTGGT CCATTGAGTGCTCTCAGACAGTGGCCAAACAGTTCAGCACTGAAGGGCAAGACCCAGCAG GGGCCTCCTTGATGTCCAGCTTGGTGGGGTTGGCAGGAAAACCTGAGTGCACTTGACTCT AATCCAATTCAGAATGCTTTCTGTTTGTCATTTGTCATTTTTTCATGTGTTACCAACGAG TCCAAAATGGTTGCTTCTTCCTGTCTATTGGTCTAGTCAGCATGATGTTGTCAATATAAT GAACCAATGTGATATTTTGTGGAAGAGACAGAGGATCAAGATCCCTTCAAGCTGTGTTAT GACTTAGGGCTGGAGAGTTACTATTTCCTTGAGGTAAAACTGAAGGTATTCTGCAGGCTT TGGCAATTGAAAGCAAATTGCTTCTGGTGGTCTTTATGGATGGGCATTTGTTAGATGTTT TAGTCAGGGTTTCTGCTGCTGCTAGAAAACACCATGACCAAAAAAACAAGTTGGGGAGGA AAGGGTTTATTCATCTTACACTTCCATATTGCTGTTTATCAACAAAGGAAGTCAGGACAG GAACTCAATCAGGGCAGGAACCTGGAGGCAGGAGCTGATGCAGAGGCCATAGAGGGGTGC TGCTTATTGGCTTTCTCCCCGTGGCTTGCTTAGCCTGCTA..........

Sequence Detail Report

Gene Symbol (Gene ID)	Dctn5 (ENSMUSG00000030868)
Transcript ID	ENSMUST00000033156

		SNP Information
Strain :
Sequence Retrieve :
Exon translate : CDS Start ( 1 ) - End ( 183 ) -
Strand :	forward reverse
Show sequence :	nucleotide amino acid
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