MoG+ -Mouse Genome database with high added value-

Target CDS Information

Gene Symbol (Gene ID)

Efemp2 (ENSMUSG00000024909)

Cross Reference

CCDS	CCDS50358.1
EMBL	AC126029, CH466612
GO	GO:0005509, GO:0005578, GO:0070062, ...show all
goslim_goa	GO:0003674, GO:0005575, GO:0005576, ...show all
MGI_trans_name	Efemp2-002
OTTP	OTTMUSP00000052424
OTTT	OTTMUST00000094317
protein_id	EDL33141.1
RefSeq_mRNA	NM_001164352.1
RefSeq_peptide	NP_001157824

RefSeq_peptide_predicted	XP_006531870.1, XP_006531872.1
UCSC	uc012bgy.1
UniParc	UPI0000355AC2
Uniprot/SPTREMBL	G5E8D6
Vega_transcript	Efemp2-002, OTTMUST00000094317
Vega_translation	222090, OTTMUSP00000052424

Definition

protein_id:ENSMUSP00000064719
translation:

MGGAVAETPDFCPPPPSLRMLPFASCLPGSLLLWAFLLLLLGAASPQDPEEPDSYTECTD
GYEWDADSQHCRDVNECLTIPEACKGEMKCINHYGGYLCLPRSAAVISDLHGEGPPPPAA
HAQQPNPCPQGYEPDEQESCVDVDECTQALHDCRPSQDCHNLPGSYQCTCPDGYRKIGPE
CVDIDECRYRYCQHRCVNLPGSFRCQCEPGFQLGPNNRSCVDVNECDMGAPCEQRCFNSY
GTFLCRCNQGYELHRDGFSCSDIDECGYSSYLCQYRCVNEPGRFSCHCPQGYQLLATRLC
QDIDECETGAHQCSEAQTCVNFHGGYRCVDTNRCVEPYVQVSDNRCLCPASNPLCREQPS
SIVHRYMSITSERSVPADVFQIQATSVYPGAYNAFQIRSGNTQGDFYIRQINNVSAMLVL
ARPVTGPREYVLDLEMVTMNSLMSYRASSVLRLTVFVGAYTF

Chromosome

Length
Position(start - end)

6710
5475011 - 5481722

Orient to Chromosome

plus

Link

Location : (19:5475011-5481722)
/

Detail Map

name	Efemp2 (ENSMUSG00000024909)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : Efemp2 note : epidermal growth factor-containing fibulin-like extracellular matrix protein 2 [Source:MGI Symbol;Acc:MGI:1891209]

name	Mus81 (ENSMUSG00000024906)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : Mus81 note : MUS81 endonuclease homolog (yeast) [Source:MGI Symbol;Acc:MGI:1918961]

name	Efemp2 (ENSMUSG00000024909)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000167304

name	Efemp2 (ENSMUSG00000024909)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000166303

name	Efemp2 (ENSMUSG00000024909)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000165485

name	Efemp2 (ENSMUSG00000024909)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000166253

name	Efemp2 (ENSMUSG00000024909)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000167371

name	Efemp2 (ENSMUSG00000024909)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000167855

name	Efemp2 (ENSMUSG00000024909)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000070118

name	Efemp2 (ENSMUSG00000024909)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000169943

name	Efemp2 (ENSMUSG00000024909)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000164204

name	Efemp2 (ENSMUSG00000024909)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000167827

name	Efemp2 (ENSMUSG00000024909)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000164388

name	Efemp2 (ENSMUSG00000024909)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000168330

name	Mus81 (ENSMUSG00000024906)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000133436

name	Mus81 (ENSMUSG00000024906)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000124334

name	Mus81 (ENSMUSG00000024906)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000025841

name	Efemp2 (ENSMUSG00000024909) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:Efemp2-004 Vega_transcript:OTTMUST00000094310 Uniprot/SPTREMBL:E9Q1U0 EMBL:AC126029 GO:GO:0005509 GO:GO:0005578 GO:GO:0070062 GO:GO:1903561 MGI_trans_name:Efemp2-004 Vega_translation:222084 Vega_translation:OTTMUSP00000052418 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005576 goslim_goa:GO:0005578 goslim_goa:GO:0043167 goslim_goa:GO:0043226 OTTP:OTTMUSP00000052418 OTTT:OTTMUST00000094310 UniParc:UPI0001F79381
definition	note : transcript_id=ENSMUST00000167304 protein_id : ENSMUSP00000129982 translation : MLPFASCLPGSLLLWAFLLLLLGAASPQDPEEPDSYTECTDGYEWDADSQHCRDVNECLTIPEACKGEMKCINHYGGYLCLPRSAAVISDLHGEGPPPPAAHAQQPNPCPQGYEPDEQESCVDVDECT

name	Efemp2 (ENSMUSG00000024909) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:Efemp2-005 Vega_transcript:OTTMUST00000094311 Uniprot/SPTREMBL:E9Q8E0 EMBL:AC126029 GO:GO:0005578 GO:GO:0070062 GO:GO:1903561 MGI_trans_name:Efemp2-005 Vega_translation:222085 Vega_translation:OTTMUSP00000052419 goslim_goa:GO:0005575 goslim_goa:GO:0005576 goslim_goa:GO:0005578 goslim_goa:GO:0043226 OTTP:OTTMUSP00000052419 OTTT:OTTMUST00000094311 UniParc:UPI0001F79380
definition	note : transcript_id=ENSMUST00000166303 protein_id : ENSMUSP00000128827 translation : MHSMGFRRHSLRMLPFASCLPGSLLLWAFLLLLLGAASPQDPEEPDSYTECTDGYEWDADSQHCRD

name	Efemp2 (ENSMUSG00000024909) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS29466.1 Uniprot/SWISSPROT:Q9WVJ9 RefSeq_peptide:NP_067449 RefSeq_mRNA:NM_021474.3 RefSeq_mRNA_predicted:XM_006531808 RefSeq_peptide_predicted:XP_006531870.1 RefSeq_peptide_predicted:XP_006531871.1 RefSeq_peptide_predicted:XP_006531872.1 Vega_transcript:Efemp2-001 Vega_transcript:OTTMUST00000094312 Uniprot/SPTREMBL:Q542X5 UCSC:uc008gdl.2 Fantom:0610011K11 EMBL:AF104223 EMBL:AK075585 EMBL:BC012269 EMBL:CH466612 GO:GO:0005509 GO:GO:0005578 GO:GO:0070062 GO:GO:1903561 MGI_trans_name:Efemp2-001 Vega_translation:222086 Vega_translation:OTTMUSP00000052420 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005576 goslim_goa:GO:0005578 goslim_goa:GO:0043167 goslim_goa:GO:0043226 protein_id:AAD45219.1 protein_id:AAH12269.1 protein_id:BAC35838.1 protein_id:EDL33138.1 protein_id:EDL33139.1 OTTP:OTTMUSP00000052420 OTTT:OTTMUST00000094312 Reactome:R-MMU-1474244 Reactome:R-MMU-1566948 Reactome:R-MMU-2129379 UniParc:UPI0000001914
definition	note : transcript_id=ENSMUST00000165485 protein_id : ENSMUSP00000133016 translation : MLPFASCLPGSLLLWAFLLLLLGAASPQDPEEPDSYTECTDGYEWDADSQHCRDVNECLTIPEACKGEMKCINHYGGYLCLPRSAAVISDLHGEGPPPPAAHAQQPNPCPQGYEPDEQESCVDVDECTQALHDCRPSQDCHNLPGSYQCTCPDGYRKIGPECVDIDECRYRYCQHRCVNLPGSFRCQCEPGFQLGPNNRSCVDVNECDMGAPCEQRCFNSYGTFLCRCNQGYELHRDGFSCSDIDECGYSSYLCQYRCVNEPGRFSCHCPQGYQLLATRLCQDIDECETGAHQCSEAQTCVNFHGGYRCVDTNRCVEPYVQVSDNRCLCPASNPLCREQPSSIVHRYMSITSERSVPADVFQIQATSVYPGAYNAFQIRSGNTQGDFYIRQINNVSAMLVLARPVTGPREYVLDLEMVTMNSLMSYRASSVLRLTVFVGAYTF

name	Efemp2 (ENSMUSG00000024909) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:Efemp2-010 Vega_transcript:OTTMUST00000094314 Uniprot/SPTREMBL:E9Q3F3 UCSC:uc008gdl.2 EMBL:AC126029 GO:GO:0005509 GO:GO:0005578 GO:GO:0070062 GO:GO:1903561 MGI_trans_name:Efemp2-010 Vega_translation:222087 Vega_translation:OTTMUSP00000052421 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005576 goslim_goa:GO:0005578 goslim_goa:GO:0043167 goslim_goa:GO:0043226 OTTP:OTTMUSP00000052421 OTTT:OTTMUST00000094314 UniParc:UPI0001F7937F
definition	note : transcript_id=ENSMUST00000166253 protein_id : ENSMUSP00000127312 translation : MLPFASCLPGSLLLWAFLLLLLGAASPQDPEEPDSYTECTDGYEWDADSQHCRDIDECRYRYCQHRCVNLPGSFRCQCEPGFQLGPNNRSCVDVNECDMGAPCEQRCFNSYGTFLCRCNQGYELHRDGFSCSDIDECGYSSYLCQYRCVNEPGRFSCHCPQGYQLLATRLCQDIDECETGAHQCSEAQTCVNFHGGYRCVDTNRCVEPYVQVSDNRCLCPASNPLCREQPSSIVHRYMSITSERSVPADVFQIQATSVYPGAYNAFQIRSGNTQGDFYIR

name	Efemp2 (ENSMUSG00000024909) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:Efemp2-003 Vega_transcript:OTTMUST00000094315 Uniprot/SPTREMBL:E9Q3N9 UCSC:uc008gdl.2 EMBL:AC126029 GO:GO:0005509 GO:GO:0005578 GO:GO:0070062 GO:GO:1903561 MGI_trans_name:Efemp2-003 Vega_translation:222088 Vega_translation:OTTMUSP00000052422 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005576 goslim_goa:GO:0005578 goslim_goa:GO:0043167 goslim_goa:GO:0043226 OTTP:OTTMUSP00000052422 OTTT:OTTMUST00000094315 UniParc:UPI0001F7937E
definition	note : transcript_id=ENSMUST00000167371 protein_id : ENSMUSP00000129746 translation : MLPFASCLPGSLLLWAFLLLLLGAASPQDPEEPDSYTECTDGYEWDADSQHCRDVNECLTIPEACKGEMKCINHYGGYLCLPRSAAVISDLHGEGPPPPAAHAQQPNPCPQGYEPDEQESCVDIDECRYRYCQHRCVNLPGSFRCQCEPGFQLGPNNRSCVDVNECDMGAPCEQRCFNSYGTFLCRCNQGYELHRDGFSCSDIDECGYSSYLCQYRCVNEPGRFSCHCPQGYQLLATRLCQDIDECETGAHQCSEAQTCVNFHGGYRCVDTNRCVEPYVQVSDNRCLCPASNPLCREQPSSIVHRYMSITSERSVPADVFQIQATSVYPGAYNAFQIRSGNTQGDFYIRQINNVSAMLVLARPVTGPREYVLDLEMVTMNSLMSYRASSVLRLTVFVGAYTF

name	Efemp2 (ENSMUSG00000024909) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:Efemp2-009 Vega_transcript:OTTMUST00000094316 Uniprot/SPTREMBL:E9Q2A0 EMBL:AC126029 GO:GO:0005509 GO:GO:0005578 GO:GO:0070062 GO:GO:1903561 MGI_trans_name:Efemp2-009 Vega_translation:222089 Vega_translation:OTTMUSP00000052423 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005576 goslim_goa:GO:0005578 goslim_goa:GO:0043167 goslim_goa:GO:0043226 OTTP:OTTMUSP00000052423 OTTT:OTTMUST00000094316 UniParc:UPI0001F7937C
definition	note : transcript_id=ENSMUST00000167855 protein_id : ENSMUSP00000132194 translation : MKCINHYGGYLCLPRSAAVISDLHGEGPPPPAAHAQQPNPCPQGYEPDEQESCVDVDECTQALHDCRPSQDCHNLPGSYQCTCPDGYRKIGPECVDIDECRYRYCQHRCVNLPGSFRCQCEPGFQLGPNNRSCVDVNECDMGAPCEQRCFNSY

name	Efemp2 (ENSMUSG00000024909) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS50358.1 RefSeq_peptide:NP_001157824 RefSeq_mRNA:NM_001164352.1 RefSeq_peptide_predicted:XP_006531870.1 RefSeq_peptide_predicted:XP_006531872.1 Vega_transcript:Efemp2-002 Vega_transcript:OTTMUST00000094317 Uniprot/SPTREMBL:G5E8D6 UCSC:uc012bgy.1 EMBL:AC126029 EMBL:CH466612 GO:GO:0005509 GO:GO:0005578 GO:GO:0070062 GO:GO:0070062 GO:GO:1903561 GO:GO:1903561 MGI_trans_name:Efemp2-002 Vega_translation:222090 Vega_translation:OTTMUSP00000052424 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005576 goslim_goa:GO:0005578 goslim_goa:GO:0043167 goslim_goa:GO:0043226 protein_id:EDL33141.1 OTTP:OTTMUSP00000052424 OTTT:OTTMUST00000094317 UniParc:UPI0000355AC2
definition	note : transcript_id=ENSMUST00000070118 protein_id : ENSMUSP00000064719 translation : MGGAVAETPDFCPPPPSLRMLPFASCLPGSLLLWAFLLLLLGAASPQDPEEPDSYTECTDGYEWDADSQHCRDVNECLTIPEACKGEMKCINHYGGYLCLPRSAAVISDLHGEGPPPPAAHAQQPNPCPQGYEPDEQESCVDVDECTQALHDCRPSQDCHNLPGSYQCTCPDGYRKIGPECVDIDECRYRYCQHRCVNLPGSFRCQCEPGFQLGPNNRSCVDVNECDMGAPCEQRCFNSYGTFLCRCNQGYELHRDGFSCSDIDECGYSSYLCQYRCVNEPGRFSCHCPQGYQLLATRLCQDIDECETGAHQCSEAQTCVNFHGGYRCVDTNRCVEPYVQVSDNRCLCPASNPLCREQPSSIVHRYMSITSERSVPADVFQIQATSVYPGAYNAFQIRSGNTQGDFYIRQINNVSAMLVLARPVTGPREYVLDLEMVTMNSLMSYRASSVLRLTVFVGAYTF

name	Efemp2 (ENSMUSG00000024909) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:Efemp2-014 Vega_transcript:OTTMUST00000094319 Uniprot/SPTREMBL:E9PYW6 EMBL:AC126029 GO:GO:0005578 GO:GO:0070062 GO:GO:1903561 MGI_trans_name:Efemp2-014 Vega_translation:222091 Vega_translation:OTTMUSP00000052425 goslim_goa:GO:0005575 goslim_goa:GO:0005576 goslim_goa:GO:0005578 goslim_goa:GO:0043226 OTTP:OTTMUSP00000052425 OTTT:OTTMUST00000094319 UniParc:UPI0001F7937D
definition	note : transcript_id=ENSMUST00000169943 protein_id : ENSMUSP00000126477 translation : MLPFASCLPGSLLLWAFLLLLLGAASPQDPEEPDSYTECTDGYEWDADSQHCRGPAQVTGCAQQAPLCRCQRVPDHPGGLQG

name	Efemp2 (ENSMUSG00000024909) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:Efemp2-007 Vega_transcript:OTTMUST00000094320 Uniprot/SPTREMBL:F7AYH6 GO:GO:0005509 GO:GO:0005578 GO:GO:0070062 GO:GO:1903561 MGI_trans_name:Efemp2-007 Vega_translation:222092 Vega_translation:OTTMUSP00000052426 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005576 goslim_goa:GO:0005578 goslim_goa:GO:0043167 goslim_goa:GO:0043226 OTTP:OTTMUSP00000052426 OTTT:OTTMUST00000094320 UniParc:UPI0001F79378
definition	codon_start : 3 note : transcript_id=ENSMUST00000164204 protein_id : ENSMUSP00000128414 translation : XLLLLGAASPQDPEEPDSYTECTDGYEWDADSQHCRDVNECLTIPEACKGEMKCINHYGGYLCLPRSAAVISDLHDGHHEFPYELPGQLCTETHGLCGSLYLLKTLREGPCGGPLPPPIA

name	Efemp2 (ENSMUSG00000024909) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:Efemp2-006 Vega_transcript:OTTMUST00000094321 Uniprot/SPTREMBL:E9Q2T8 UCSC:uc012bgy.1 EMBL:AC126029 GO:GO:0005509 GO:GO:0005578 GO:GO:0070062 GO:GO:1903561 MGI_trans_name:Efemp2-006 Vega_translation:222093 Vega_translation:OTTMUSP00000052427 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005576 goslim_goa:GO:0005578 goslim_goa:GO:0043167 goslim_goa:GO:0043226 OTTP:OTTMUSP00000052427 OTTT:OTTMUST00000094321 UniParc:UPI0001F79379
definition	note : transcript_id=ENSMUST00000167827 protein_id : ENSMUSP00000127478 translation : MKCINHYGGYLCLPRSAAVISDLHGEGPPPPAAHAQQPNPCPQGYEPDEQESCVDVDECTQALHDCRPSQDCHNLPGSYQCTCPDGYRKIGPECVDIDECRYRYCQHRCVNLPGSFRCQCEPGFQLGPNNRSCVDVNECDMGAPCEQRCFNSYGTFLCRCNQGYELHRDGFSCSDIDECGYSSYLCQYRCV

name	Efemp2 (ENSMUSG00000024909) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:Efemp2-011 Vega_transcript:OTTMUST00000094322 Uniprot/SPTREMBL:F6Z1C2 GO:GO:0005509 GO:GO:0005578 GO:GO:0070062 GO:GO:1903561 MGI_trans_name:Efemp2-011 Vega_translation:222094 Vega_translation:OTTMUSP00000052428 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005576 goslim_goa:GO:0005578 goslim_goa:GO:0043167 goslim_goa:GO:0043226 OTTP:OTTMUSP00000052428 OTTT:OTTMUST00000094322 UniParc:UPI0001F7937A
definition	codon_start : 3 note : transcript_id=ENSMUST00000164388 protein_id : ENSMUSP00000131979 translation : XYSSYLCQYRCVNEPGRFSCHCPQGYQLLATRLCQDIDECETGAHQCSEAQTCVNFHGGYRCVDTNRCVEPYVQVSDNRCLCPASNPLCREQPSSIVHRYMSITSERSVPADVFQIQATSVYPGAYNAFQIRSGNTQGDFYIRVRCFFTHTQLTQVI

name	Efemp2 (ENSMUSG00000024909) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:Efemp2-008 Vega_transcript:OTTMUST00000094323 Uniprot/SPTREMBL:F6R0V7 EMBL:AC126029 GO:GO:0005578 GO:GO:0070062 GO:GO:1903561 MGI_trans_name:Efemp2-008 Vega_translation:222095 Vega_translation:OTTMUSP00000052429 goslim_goa:GO:0005575 goslim_goa:GO:0005576 goslim_goa:GO:0005578 goslim_goa:GO:0043226 OTTP:OTTMUSP00000052429 OTTT:OTTMUST00000094323 UniParc:UPI0001F7937B
definition	note : transcript_id=ENSMUST00000168330 protein_id : ENSMUSP00000130003 translation : SCWLQGSAKILTSVKQVHTNVLRPKPVSTSMGVTAVWTPTVVWSPMSKCQTTFIHCAPLHEHHLRAKCAC

name	Mus81 (ENSMUSG00000024906) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:Mus81-004 Vega_transcript:OTTMUST00000085634 Uniprot/SPTREMBL:F6VIY4 UCSC:uc008gdn.2 GO:GO:0000737 GO:GO:0003677 GO:GO:0005634 GO:GO:0005730 GO:GO:0006281 GO:GO:0048257 GO:GO:0072429 MGI_trans_name:Mus81-004 Vega_translation:222096 Vega_translation:OTTMUSP00000046283 goslim_goa:GO:0003674 goslim_goa:GO:0003677 goslim_goa:GO:0004518 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005730 goslim_goa:GO:0006259 goslim_goa:GO:0006950 goslim_goa:GO:0008150 goslim_goa:GO:0009056 goslim_goa:GO:0034641 goslim_goa:GO:0034655 goslim_goa:GO:0043226 OTTP:OTTMUSP00000046283 OTTT:OTTMUST00000085634 UniParc:UPI000198D0AC
definition	codon_start : 3 note : transcript_id=ENSMUST00000133436 protein_id : ENSMUSP00000118580 translation : XRHTRFVFQKALRSLQRYPLPLRSGKEAKILQHFGDRLCRMLDEKLKQHLASGGDHAPSSPSGKKGASKGPPEQVQDSSMPVPTQPQAGSTSVGYWPAQNSGAREILLQLYREHLNSDGHSFLTKEELLQKCAQKTPRVVPGSSKPWPALRSLLHRNLILGTHRPARYALTPEGLELAQKLAEAEGLSTRHAGFRPEEHHGEDSAVPEALSEPGTTEGAVQQRPLELRPSEYRVLLCVDIGETRGAGHRPEMLRELQRLRVPHTVRKLHVGDFVWVAQETRPRDPERPGELVLDHIVERKRLDDLCSSIIDGRFREQKFRLKRCGLGHRVYLVEEHGSVHNLSLPESTLLQAVTNTQVIDGFFVKRTMDIKESAGYLALLTKGLERLYQ

name	Mus81 (ENSMUSG00000024906) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS29467.1 Uniprot/SWISSPROT:Q91ZJ0 RefSeq_peptide:NP_082153 RefSeq_mRNA:NM_027877.3 Vega_transcript:Mus81-001 Vega_transcript:OTTMUST00000085631 UCSC:uc008gdn.2 EMBL:AF425647 EMBL:BC026560 GO:GO:0000737 GO:GO:0000737 GO:GO:0003677 GO:GO:0005515 GO:GO:0005634 GO:GO:0005634 GO:GO:0005730 GO:GO:0005730 GO:GO:0006281 GO:GO:0006281 GO:GO:0006310 GO:GO:0046872 GO:GO:0048257 GO:GO:0048257 GO:GO:0072429 GO:GO:0072429 MGI_trans_name:Mus81-001 PDB:2KP7 Vega_translation:222097 Vega_translation:OTTMUSP00000046281 goslim_goa:GO:0003674 goslim_goa:GO:0003677 goslim_goa:GO:0004518 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005730 goslim_goa:GO:0006259 goslim_goa:GO:0006950 goslim_goa:GO:0008150 goslim_goa:GO:0009056 goslim_goa:GO:0034641 goslim_goa:GO:0034655 goslim_goa:GO:0043167 goslim_goa:GO:0043226 protein_id:AAH26560.1 protein_id:AAL28066.1 OTTP:OTTMUSP00000046281 OTTT:OTTMUST00000085631 UniParc:UPI0000022493
definition	note : transcript_id=ENSMUST00000124334 protein_id : ENSMUSP00000114895 translation : MAEPVRLGRKRPLPVCPNPLFVRWLTEWRDEAASRGRHTRFVFQKALRSLQRYPLPLRSGKEAKILQHFGDRLCRMLDEKLKQHLASGGDHAPSSPSGKKGASKGPPEQVQDSSMPVPTQPQAGSTSVGYWPAQNSGAREILLQLYREHLNSDGHSFLTKEELLQKCAQKTPRVVPGSSKPWPALRSLLHRNLILGTHRPARYALTPEGLELAQKLAEAEGLSTRHAGFRPEEHHGEDSAVPEALSEPGTTEGAVQQRPLELRPSEYRVLLCVDIGETRGAGHRPEMLRELQRLRVPHTVRKLHVGDFVWVAQETRPRDPERPGELVLDHIVERKRLDDLCSSIIDGRFREQKFRLKRCGLGHRVYLVEEHGSVHNLSLPESTLLQAVTNTQVIDGFFVKRTMDIKESAGYLALLTKGLERLYQGHTLRSRPWGAPGAAESEAKPSTNPLCSLLTFSDFNAEAVKNKAQSVREVFARQLMQVRGLSGEKAAAVVDRYSTPASLLAAYDACATAKEQEMLLSTIKCGRLQRNLGPALSRTLYQLYCSHSPLS

name	Mus81 (ENSMUSG00000024906) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:Mus81-002 Vega_transcript:OTTMUST00000085632 Uniprot/SPTREMBL:F8WIN9 UCSC:uc008gdn.2 EMBL:AC126029 GO:GO:0000737 GO:GO:0003677 GO:GO:0005634 GO:GO:0005730 GO:GO:0006281 GO:GO:0048257 GO:GO:0072429 MGI_trans_name:Mus81-002 Vega_translation:222098 Vega_translation:OTTMUSP00000046282 goslim_goa:GO:0003674 goslim_goa:GO:0003677 goslim_goa:GO:0004518 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005730 goslim_goa:GO:0006259 goslim_goa:GO:0006950 goslim_goa:GO:0008150 goslim_goa:GO:0009056 goslim_goa:GO:0034641 goslim_goa:GO:0034655 goslim_goa:GO:0043226 OTTP:OTTMUSP00000046282 OTTT:OTTMUST00000085632 UniParc:UPI000198D0AB
definition	note : transcript_id=ENSMUST00000025841 protein_id : ENSMUSP00000025841 translation : MAEPVRLGRKRPLPVCPNPLFVRWLTEWRDEAASRGRHTRFVFQKALRSLQRYPLPLRSGKEAKILQHFGDRLCRMLDEKLKQHLASGGDHAPSSPSGKKGASKGPPEQVQDSSMPVPTQPQAGSTSVGYWPAQNSGAREILLQLYREHLNSDGHSFLTKEELLQKCAQKTPRVVPGSSKPWPALRSLLHRNLILGTHRPARYALTPEGLELAQKLAEAEGLSTRHAGFRPEEHHGEDSAVPEALSEPGTTEGAVQQRPLELRPSEYRVLLCVDIGETRGAGHRPEMLRELQRLRVPHTVRKLHVGDFVWVAQETRPRDPERPGELVLDHIVERKRLDDLCSSIIDGRFREQKFRLKRCGLGHRVYLVEEHGSVHNLSLPESTLLQAVTNTQVIDGFFVKRTMDIKESAGYLALLTKGLERLYQGHTLRSRPWGAPGAAESEAKPSTNPLCSLLTFSDFNAEAVKNKAQSVREVFARQLMQVRGLSGEKAAAVVDRYSTPAR

name
type	STS
link
xref	UniSTS_NUM:181159 UniSTS:AW045863 WI_MRC-RH:688967
definition	note : map_weight=2 standard_name : AW045863

name
type	misc_feature
link
xref
definition	note : contig AC126029.3 1..173330(-1)

name	Efemp2 (ENSMUSG00000024909)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000094313 Vega_transcript:OTTMUST00000094313 MGI_trans_name:Efemp2-012 OTTT:OTTMUST00000094313
definition	note : retained_intron note : transcript_id=ENSMUST00000166558

name	Efemp2 (ENSMUSG00000024909)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000094318 Vega_transcript:OTTMUST00000094318 MGI_trans_name:Efemp2-013 OTTT:OTTMUST00000094318
definition	note : retained_intron note : transcript_id=ENSMUST00000167920

name	Mus81 (ENSMUSG00000024906)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000085641 Vega_transcript:OTTMUST00000085641 MGI_trans_name:Mus81-011 OTTT:OTTMUST00000085641
definition	note : retained_intron note : transcript_id=ENSMUST00000140365

name	Mus81 (ENSMUSG00000024906)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000085633 Vega_transcript:OTTMUST00000085633 UCSC:uc008gdo.2 MGI_trans_name:Mus81-003 OTTT:OTTMUST00000085633
definition	note : retained_intron note : transcript_id=ENSMUST00000147961

name	Mus81 (ENSMUSG00000024906)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000085640 Vega_transcript:OTTMUST00000085640 MGI_trans_name:Mus81-010 OTTT:OTTMUST00000085640
definition	note : retained_intron note : transcript_id=ENSMUST00000149908

name	Mus81 (ENSMUSG00000024906)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000085639 Vega_transcript:OTTMUST00000085639 MGI_trans_name:Mus81-009 OTTT:OTTMUST00000085639
definition	note : retained_intron note : transcript_id=ENSMUST00000146661

name	Mus81 (ENSMUSG00000024906)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000085638 Vega_transcript:OTTMUST00000085638 MGI_trans_name:Mus81-008 OTTT:OTTMUST00000085638
definition	note : retained_intron note : transcript_id=ENSMUST00000151932

Polymorphisms Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Efemp2 (ENSMUSG00000024909)
Transcript ID	ENSMUST00000070118

Reports
substitution
cSNPs	5
Insertion	10
Deletion	13
SNPs	-1kb 5469769(c.-5242A>G), 5469996(c.-5015C>T), 5470027(c.-4984A>G), 5470096(c.-4915G>A), 5470163(c.-4848C>T), 5470364(c.-4647A>G), 5470560(c.-4451C>A), 5470793(c.-4218A>G), 5470794(c.-4217A>G), 5470871(c.-4140T>C), 5471132(c.-3879G>A), 5471168(c.-3843A>G), 5471286(c.-3725A>G), 5471318(c.-3693T>C), 5471430(c.-3581C>T), 5471605(c.-3406A>G), 5471719(c.-3292G>C), 5472418(c.-2593T>C), 5472458(c.-2553C>T), 5472725(c.-2286G>T), 5473055(c.-1956T>C), 5473117(c.-1894T>C), 5473320(c.-1691G>A), 5473568(c.-1443T>C), 5473586(c.-1425G>A), 5473690(c.-1321T>A), 5473758(c.-1253T>G), 5473765(c.-1246T>C), 5474055(c.-956A>G), 5474063(c.-948A>C), 5474095(c.-916T>C), 5474102(c.-909C>A), 5474103(c.-908T>A), 5474219(c.-792T>C), 5474530(c.-481G>A), 5'UTR CDS 5476073(c.225C>T), 5476244(c.396C>T), 5480043(c.798C>T), 5480558(c.1044C>T), 5481627(c.1294C>T), 3'UTR 5481790(c.68C>T), INTRON 5475468(c.217+12T>A), 5475601(c.217+145T>C), 5475705(c.217+249T>C), 5475777(c.218-289C>A), 5475798(c.218-268C>G), 5475804(c.218-262C>T), 5476290(c.424+18G>T), 5476295(c.424+23T>C), 5476536(c.424+264G>A), 5476544(c.424+272T>A), 5476593(c.424+321G>C), 5476649(c.424+377G>A), 5476684(c.424+412T>C), 5476708(c.424+436G>T), 5476784(c.424+512C>T), 5476786(c.424+514T>C), 5476787(c.424+515G>A), 5476809(c.424+537C>T), 5476843(c.424+571G>C), 5476865(c.424+593G>T), 5476902(c.424+630C>A), 5476931(c.425-631C>T), 5476932(c.425-630T>C), 5476934(c.425-628C>T), 5476965(c.425-597G>A), 5477267(c.425-295G>A), 5477393(c.425-169T>C), 5477857(c.548-70T>A), 5477862(c.548-65G>A), 5477864(c.548-63G>A), 5478093(c.664+50C>G), 5478100(c.664+57G>A), 5478126(c.665-75T>G), 5478162(c.665-39A>T), 5478164(c.665-37A>C), 5478342(c.784+22G>A), 5478365(c.784+45C>T), 5478601(c.784+281T>C), 5478628(c.784+308G>A), 5478629(c.784+309A>G), 5478712(c.784+392G>A), 5479035(c.784+715C>T), 5479124(c.784+804C>T), 5479201(c.785-829C>T), 5479279(c.785-751C>T), 5479651(c.785-379G>A), 5479927(c.785-103T>G), 5479931(c.785-99T>C), 5480445(c.1031+85A>G), 5480460(c.1032-86T>C), 5480462(c.1032-84T>C), 5480508(c.1032-38G>A), 5480528(c.1032-18C>A), 5480938(c.1227+197T>G), 5481089(c.1227+348G>A), 5481361(c.1228-200T>C), 5481390(c.1228-171A>G), 5481448(c.1228-113C>T), 5481554(c.1228-7C>A), +1kb 5482016(c.294C>T), 5482459(c.737G>T), 5482631(c.909A>G), 5482692(c.970G>A), 5482959(c.1237C>T), 5483094(c.1372A>G), 5483160(c.1438C>T), 5483270(c.1548G>A), 5484043(c.2321A>G), 5484185(c.2463C>T), 5484461(c.2739T>C), 5484491(c.2769A>C), 5484713(c.2991A>G), 5484818(c.3096T>G), 5485199(c.3477A>G), 5485416(c.3694A>T), 5486269(c.4547A>C), 5486717(c.4995C>T), 5486836(c.5114A>T), 5486837(c.*5115C>G),
Insertions	-1kb 5472556 (c.-2455_-2454insCTCAC), 5473205 (c.-1806_-1805insT), 5474689 (c.-325_-322dupCGGG), 5'UTR CDS 3'UTR INTRON 5476644 (c.424+375dupG), 5476647 (c.424+375dupG), 5478351 (c.784+31_784+32insG), +1kb 5482450 (c.728_729insGTCTAT), 5482496 (c.774_775insA), 5482501 (c.779dupA), 5486732 (c.5010_*5011insGGCCCA),
Deletions	-1kb 5470333 (c.-4677_-4670delGGAAGGCA), 5471574 (c.-3436_-3434delAAC), 5471775 (c.-3235_-3233delCTT), 5471852 (c.-3158delC), 5472547 (c.-2463_-2462delCT), 5473014 (c.-1996_-1992delTTTTA), 5473710 (c.-1300_-1293delACAAACAA), 5473745 (c.-1265_-1264delTT), 5474741 (c.-269_-266delCCGC), 5'UTR CDS 3'UTR INTRON 5476458 (c.424+199delT), 5476607 (c.424+336_424+338delGTT), 5477375 (c.425-172_425-168delTTTTT), 5478377 (c.784+60_784+68delTGCCGCCTC), +1kb
coding sequence substitutions
premature termination by the nucleotide substitution	0
synonymous num	5
non-synonymous num	0
synonymous substitutions	5476073 (p.Asn75Asn), 5476244 (p.Tyr132Tyr), 5480043 (p.Cys266Cys), 5480558 (p.Cys348Cys), 5481627 (p.Leu432Leu),
non-synonymous substitutions
B6 transcript (ENSMUST00000070118)	MGGAVAETPDFCPPPPSLRMLPFASCLPGSLLLWAFLLLLLGAASPQDPEEPDSYTECTD GYEWDADSQHCRDVNECLTIPEACKGEMKCINHYGGYLCLPRSAAVISDLHGEGPPPPAA HAQQPNPCPQGYEPDEQESCVDVDECTQALHDCRPSQDCHNLPGSYQCTCPDGYRKIGPE CVDIDECRYRYCQHRCVNLPGSFRCQCEPGFQLGPNNRSCVDVNECDMGAPCEQRCFNSY GTFLCRCNQGYELHRDGFSCSDIDECGYSSYLCQYRCVNEPGRFSCHCPQGYQLLATRLC QDIDECETGAHQCSEAQTCVNFHGGYRCVDTNRCVEPYVQVSDNRCLCPASNPLCREQPS SIVHRYMSITSERSVPADVFQIQATSVYPGAYNAFQIRSGNTQGDFYIRQINNVSAMLVL ARPVTGPREYVLDLEMVTMNSLMSYRASSVLRLTVFVGAYTF*
MSMv4 transcript	MGGAVAETPDFCPPPPSLRMLPFASCLPGSLLLWAFLLLLLGAASPQDPEEPDSYTECTD GYEWDADSQHCRDVNECLTIPEACKGEMKCINHYGGYLCLPRSAAVISDLHGEGPPPPAA HAQQPNPCPQGYEPDEQESCVDVDECTQALHDCRPSQDCHNLPGSYQCTCPDGYRKIGPE CVDIDECRYRYCQHRCVNLPGSFRCQCEPGFQLGPNNRSCVDVNECDMGAPCEQRCFNSY GTFLCRCNQGYELHRDGFSCSDIDECGYSSYLCQYRCVNEPGRFSCHCPQGYQLLATRLC QDIDECETGAHQCSEAQTCVNFHGGYRCVDTNRCVEPYVQVSDNRCLCPASNPLCREQPS SIVHRYMSITSERSVPADVFQIQATSVYPGAYNAFQIRSGNTQGDFYIRQINNVSAMLVL ARPVTGPREYVLDLEMVTMNSLMSYRASSVLRLTVFVGAYTF*
homology	100.00 (463 / 463)

Exon Detail Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Efemp2 (ENSMUSG00000024909)
Transcript ID	ENSMUST00000070118


..........GGAAGACCGGGTTATCGCCGCTAGCGGTCTGGGCCAGGCACGGGAACCCT
GGACACGCAACCCTTTCCCGTCTAGGCCCGCCTTGAGACGTGGGCAACGCGAAGTCCCGC
CCATTCACCCCTTCCTGGGCGCTGGAGGCACCCAGACTCCGCCTCCAAGGCATGATCTCC
GCTGGGGGCGGAGGCGGAAACTGGGTGGGGGACTTGGATGGGAAGAGGCTCGGGAAAGGG
CTGGCACTGGGCCCTAGTGTCCTCCGCGCCCAAGTTCAAGCTTGCCCGCCTTCCCAGGGG
CTTCCATTCATTTCGGGCCAAGACTACTGCTGCCCTCTCCCCCATACTACTGTAGCTTTG
CGAAGGCACGGCTTGGGGAAGCAGTACCCCAAGTAAAGAGACCACCTGGAGGCCGTGGAT
GTGGATGCAGAGGGAATTGGACAATTAATTTGGACAATTAATTAAGTTGGACGAGGGTCC
GGAAACCTTGGATGAAGTTTTAGGATCATCTAAGTGATGATGGTTTAACACTGGATAAAA
TTCTGAAAGGAGTAGAATTTGAAGCTCTGAGGATTAAATGCCTAGTAGGTTCTGGGAGGC
GCAGAATCGGGTTACACGGAGGTGCGAATGCACAGCATGGGATTCCGGAGGCACAGGTTA
GATAGGGTCTAGGTGGGCAGAATAACATTTTGAGTGAAGGCCCGGGGTCCTTAGGTGAGT
TTGGGGGCCAAGCATCAAGGTCAGTGGCCTAAGGATCCAAACTTTGGGAAACTCTGGCTG
GGCGTCCGCAAGCGACTCCAGGCAGCGCCGCGGGGGACCGGGTGGGGGCCTGTGGCCGGC
CGGGGCGGAGAAGCCGGGGGGTCGGGGTCCCTCCCCCTGGCGCGGGCTCAGGAATCCGCC
GAAGGGCGGGCGGAGGCGCCGGGGTGGGCCGCGGCCGGCGGGCGGGCGGGGGGCGCTTCC
TGGGGCCGCGCGTCCAGTGAGCTGCGCGGTCCGTCCGTCCGTCCGCCCGC
CCGCAGGCACTGCTGGAGTCGACGCGTGAGTGGCCTCCAGCGGAGGGAGGGCGCGGGCCGTTTGGCGGCCGAGTCGGTGCTGCGCGGAGCGGGGAGGCCTGCGCTTCACGACTCGCGGGGCGGGGGCGGGGCGGTCCGGGATTGCGGGCCTGGGCCATAGGCCTGCGAAAGGATTCTGTCCCCAGCCCTGGAAGGTTCCAGCCTCAGCACAGTCCTGAGACGAGACAGCTGGGACCCAGGCTCCCCTTCCAGATAGAGGGAATGGGGGGTGCTGTGGCAGAAACCCCTGACTTCTGCCCACCACCTCCCAGCCTCAGGATGCTCCCTTTTGCCTCCTGCCTCCCCGGGTCTTTGCTGCTCTGGGCGTTTCTGCTGTTGCTCTTGGGAGCAGCGTCCCCACAGGATCCCGAGGAGCCGGACAGCTACACG
GTGGGGACCGTGGGGTCACCAGCTT..........CTGGCCACATCGGGTTCCCTTCCAG
GAATGCACAGATGGCTATGAGTGGGATGCAGACAGCCAGCACTGCCGGG
GTGAGTCTCTGACTGGGGTACTAGC..........GTGCCCAGCAGGCCCCTCTCTGCAG
ATGTCAATGAGTGCCTGACCATCCCGGAGGCTTGCAAGGGTGAGATGAAATGCATCAACCACTACGGGGGTTATTTGTGTCTGCCTCGCTCTGCTGCCGTCATCAGTGATCTCCATGGTGAAGGACCTCCACCGCCAGCGGCCCATGCTCAACAACCAAACCCTTGCCCGCAGGGCTATGAGCCTGATGAACAGGAGAGCTGTGTGG
GTAAGCAAGGGCTGATCTGGTGCCT..........GAAGGCTGAATGCTGTCTCTCACAG
ATGTGGACGAGTGTACCCAGGCTTTGCATGACTGTCGCCCTAGTCAGGACTGCCATAACCTTCCTGGCTCCTACCAGTGCACCTGCCCTGATGGTTACCGAAAAATTGGACCCGAATGTGTGG
GTGAGTTCTGAGTGGCTCTGCTAGG..........TTTCCCTCCCCCACCTCCATCTCAG
ACATAGATGAGTGTCGTTACCGCTATTGCCAGCATCGATGTGTGAACCTGCCGGGCTCTTTTCGATGCCAGTGTGAGCCAGGCTTCCAGTTGGGACCTAACAACCGCTCTTGTGTGG
GTGAGGCTGTGCCAGACAAGGTTCT..........CTCCTGTTTGTCCTCGCACCCTCAG
ATGTGAATGAGTGTGACATGGGAGCCCCATGTGAGCAGCGCTGCTTCAACTCCTATGGGACCTTCCTGTGTCGCTGTAACCAGGGCTATGAGCTGCACCGGGATGGCTTCTCCTGCAGCG
GTGAGAGTCACTTGTGCTACTGGAT..........GGTCCTCATCCCCGCCCTCCCTCAG
ATATCGATGAGTGTGGCTACTCCAGTTACCTCTGCCAGTACCGCTGTGTCAACGAGCCAGGCCGATTCTCCTGTCACTGCCCACAAGGCTACCAGCTGCTGGCTACAAGGCTCTGCCAAG
GTACAGGTGCTTGGGTGGGCAGGAG..........TCCAACTCCACCTCCCTTGGCACAG
ATATTGACGAGTGTGAAACAGGTGCACACCAATGTTCTGAGGCCCAAACCTGTGTCAACTTCCATGGGGGTTACCGCTGTGTGGACACCAACCGTTGTGTGGAGCCCTATGTCCAAGTGTCAGACAA
GTGAGTCAACCTGATGGCAGTTTGC..........TCCTGTCACATCTTGGGGTCTCTAG
CCGCTGCCTCTGTCCTGCCTCCAATCCCCTTTGTCGAGAGCAGCCTTCATCCATTGTGCACCGCTACATGAGCATCACCTCAGAGCGAAGTGTGCCTGCTGACGTGTTTCAGATCCAGGCAACCTCTGTCTACCCTGGTGCCTACAATGCCTTTCAGATCCGTTCTGGAAACACACAGGGGGACTTCTACATTAGG
GTAAGGTGCTTCTTTACCCACACTC..........TTCTACTGTCCACTGTACACTGCAG
CAAATCAACAATGTCAGCGCCATGCTGGTCCTCGCCAGGCCAGTGACGGGACCCCGGGAGTACGTGTTGGACCTGGAGATGGTCACCATGAATTCCCTTATGAGCTACCGGGCCAGCTCTGTACTGAGACTCACGGTCTTTGTGGGAGCCTATACCTTCTGAAGACCCTCAGGGAAGGGCCATGTGGGGGCCCCCTTCCCCCTCCCATAGCTTAAGCAGCCCCGGGGGCTTAGGGATGACCGTTCTGCTTAAAGGAACTATGATGTGAAGGACAATAAAGGGAGAAAGAAGGA
GTCCTGGCTGAGGTGGGTGAGTAACCTCAGCCCGGGAAGGGGCTGGCCTGCGAGAGGGGC
AGGTGAGTTCCACACAAGGGGTCCTCTCCAGTCAGGCTGAGGTTTCAGAGCCAAGGTCAT
TCTTCAGAATCAGCCTGAGCAGTGGGCAGTGGTGGCGCACACTTTTAATCCCAGCACTCA
GGGGAGACAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCCTGATCTACAGAGTTCAAG
GACAGCCAGGGCTACACAGAGAAACCCTGTCTCAGGAGGAAGAAAAAAAAAAAAAAAAAA
AAAAGGCCTGAGCAGGGAGTTCTGAAGAGTATGTACCTCAGGTCCTCACTCAAGAGCTTG
GCTGATACTGGGCCCAGGAACCATGTTCTGGTCAGTGCTAGGAGTTTGGGGTTAGCATCC
TAGCTCTACCCCAAGCTCTGCACTTGTACAAGCCTCTGGTCTCCAGTCACTAGAATGAGG
CAGCTGGATTGAGAAACTTTTTGACCGGGGGCCATCTAATTACACTCAAACATACAGTGC
CTTATTGACCCCATCTCTCTGACCAGGGCATTCCCAGCCCCTAAGGAGTGTTTATCTATT
ATCCAGCCATCCATATTTAGGGTCTGGCTCTATGTAAGTACTTATTAAACATGGGTGTGC
ACAACCATGTTTAGCCCAGGAGCTTGCCTTAAAAAGAACCATGGTGTGGTGCCCCACACC
TTTAATTTCAGGTCTTGGAAGGTAGACCCAGAAAAACTGGGAGTTCTAGGCTAGACTGGG
TTACAGAGCAAGTTTTAGGCCAAGCTGGTTTTAGGAATGGGTAAGGACACTGTACAGGAC
TGCGGATCATTGCTTTTTGGAAGAGGAATTGCCTAGTAGGTGTGAGGCTCTGGGTTCCGC
TGCTAGCACCACCACACACAACAGTTGGCTCAGCAGTGTAGTCTTCCAACCCCTGTAGAT
TTCAGAAGGACCTTGGCATTGCTTCCTTAACAGCCGAGAC..........

Sequence Detail Report

Gene Symbol (Gene ID)	Efemp2 (ENSMUSG00000024909)
Transcript ID	ENSMUST00000070118

		SNP Information
Strain :
Sequence Retrieve :
Exon translate : CDS Start ( 1 ) - End ( 463 ) -
Strand :	forward reverse
Show sequence :	nucleotide amino acid
Color information

No.	Exon / Intron	Start	End	Start Phase	End Phase	Length	Sequence
	5' upstream sequence						..........GGAAGACCGGGTTATCGCCGCTAGCGGTCTGGGCCAGGCACGGGAACCCT GGACACGCAACCCTTTCCCGTCTAGGCCCGCCTTGAGACGTGGGCAACGCGAAGTCCCGC CCATTCACCCCTTCCTGGGCGCTGGAGGCACCCAGACTCCGCCTCCAAGGCATGATCTCC GCTGGGGGCGGAGGCGGAAACTGGGTGGGGGACTTGGATGGGAAGAGGCTCGGGAAAGGG CTGGCACTGGGCCCTAGTGTCCTCCGCGCCCAAGTTCAAGCTTGCCCGCCTTCCCAGGGG CTTCCATTCATTTCGGGCCAAGACTACTGCTGCCCTCTCCCCCATACTACTGTAGCTTTG CGAAGGCACGGCTTGGGGAAGCAGTACCCCAAGTAAAGAGACCACCTGGAGGCCGTGGAT GTGGATGCAGAGGGAATTGGACAATTAATTTGGACAATTAATTAAGTTGGACGAGGGTCC GGAAACCTTGGATGAAGTTTTAGGATCATCTAAGTGATGATGGTTTAACACTGGATAAAA TTCTGAAAGGAGTAGAATTTGAAGCTCTGAGGATTAAATGCCTAGTAGGTTCTGGGAGGC GCAGAATCGGGTTACACGGAGGTGCGAATGCACAGCATGGGATTCCGGAGGCACAGGTTA GATAGGGTCTAGGTGGGCAGAATAACATTTTGAGTGAAGGCCCGGGGTCCTTAGGTGAGT TTGGGGGCCAAGCATCAAGGTCAGTGGCCTAAGGATCCAAACTTTGGGAAACTCTGGCTG GGCGTCCGCAAGCGACTCCAGGCAGCGCCGCGGGGGACCGGGTGGGGGCCTGTGGCCGGC CGGGGCGGAGAAGCCGGGGGGTCGGGGTCCCTCCCCCTGGCGCGGGCTCAGGAATCCGCC GAAGGGCGGGCGGAGGCGCCGGGGTGGGCCGCGGCCGGCGGGCGGGCGGGGGGCGCTTCC TGGGGCCGCGCGTCCAGTGAGCTGCGCGGTCCGTCCGTCCGTCCGCCCGC
1	EXON 1	5474750	5475178	-	0	429	CCGCAGGCACTGCTGGAGTCGACGCGTGAGTGGCCTCCAGCGGAGGGAGGGCGCGGGCCG TTTGGCGGCCGAGTCGGTGCTGCGCGGAGCGGGGAGGCCTGCGCTTCACGACTCGCGGGG CGGGGGCGGGGCGGTCCGGGATTGCGGGCCTGGGCCATAGGCCTGCGAAAGGATTCTGTC CCCAGCCCTGGAAGGTTCCAGCCTCAGCACAGTCCTGAGACGAGACAGCTGGGACCCAGG CTCCCCTTCCAGATAGAGGGAATGGGGGGTGCTGTGGCAGAAACCCCTGACTTCTGCCCA CCACCTCCCAGCCTCAGGATGCTCCCTTTTGCCTCCTGCCTCCCCGGGTCTTTGCTGCTC TGGGCGTTTCTGCTGTTGCTCTTGGGAGCAGCGTCCCCACAGGATCCCGAGGAGCCGGAC AGCTACACG
	INTRON 1 - 2	5475179	5475407			229	GTGGGGACCGTGGGGTCACCAGCTT..........CTGGCCACATCGGGTTCCCTTCCAG
2	EXON 2	5475408	5475456	0	1	49	GAATGCACAGATGGCTATGAGTGGGATGCAGACAGCCAGCACTGCCGGG
	INTRON 2 - 3	5475457	5476065			609	GTGAGTCTCTGACTGGGGTACTAGC..........GTGCCCAGCAGGCCCCTCTCTGCAG
3	EXON 3	5476066	5476272	1	1	207	ATGTCAATGAGTGCCTGACCATCCCGGAGGCTTGCAAGGGTGAGATGAAATGCATCAACC ACTACGGGGGTTATTTGTGTCTGCCTCGCTCTGCTGCCGTCATCAGTGATCTCCATGGTG AAGGACCTCCACCGCCAGCGGCCCATGCTCAACAACCAAACCCTTGCCCGCAGGGCTATG AGCCTGATGAACAGGAGAGCTGTGTGG
	INTRON 3 - 4	5476273	5477561			1289	GTAAGCAAGGGCTGATCTGGTGCCT..........GAAGGCTGAATGCTGTCTCTCACAG
4	EXON 4	5477562	5477684	1	1	123	ATGTGGACGAGTGTACCCAGGCTTTGCATGACTGTCGCCCTAGTCAGGACTGCCATAACC TTCCTGGCTCCTACCAGTGCACCTGCCCTGATGGTTACCGAAAAATTGGACCCGAATGTG TGG
	INTRON 4 - 5	5477685	5477926			242	GTGAGTTCTGAGTGGCTCTGCTAGG..........TTTCCCTCCCCCACCTCCATCTCAG
5	EXON 5	5477927	5478043	1	1	117	ACATAGATGAGTGTCGTTACCGCTATTGCCAGCATCGATGTGTGAACCTGCCGGGCTCTT TTCGATGCCAGTGTGAGCCAGGCTTCCAGTTGGGACCTAACAACCGCTCTTGTGTGG
	INTRON 5 - 6	5478044	5478200			157	GTGAGGCTGTGCCAGACAAGGTTCT..........CTCCTGTTTGTCCTCGCACCCTCAG
6	EXON 6	5478201	5478320	1	1	120	ATGTGAATGAGTGTGACATGGGAGCCCCATGTGAGCAGCGCTGCTTCAACTCCTATGGGA CCTTCCTGTGTCGCTGTAACCAGGGCTATGAGCTGCACCGGGATGGCTTCTCCTGCAGCG
	INTRON 6 - 7	5478321	5480029			1709	GTGAGAGTCACTTGTGCTACTGGAT..........GGTCCTCATCCCCGCCCTCCCTCAG
7	EXON 7	5480030	5480149	1	1	120	ATATCGATGAGTGTGGCTACTCCAGTTACCTCTGCCAGTACCGCTGTGTCAACGAGCCAG GCCGATTCTCCTGTCACTGCCCACAAGGCTACCAGCTGCTGGCTACAAGGCTCTGCCAAG
	INTRON 7 - 8	5480150	5480233			84	GTACAGGTGCTTGGGTGGGCAGGAG..........TCCAACTCCACCTCCCTTGGCACAG
8	EXON 8	5480234	5480360	1	2	127	ATATTGACGAGTGTGAAACAGGTGCACACCAATGTTCTGAGGCCCAAACCTGTGTCAACT TCCATGGGGGTTACCGCTGTGTGGACACCAACCGTTGTGTGGAGCCCTATGTCCAAGTGT CAGACAA
	INTRON 8 - 9	5480361	5480545			185	GTGAGTCAACCTGATGGCAGTTTGC..........TCCTGTCACATCTTGGGGTCTCTAG
9	EXON 9	5480546	5480741	2	0	196	CCGCTGCCTCTGTCCTGCCTCCAATCCCCTTTGTCGAGAGCAGCCTTCATCCATTGTGCA CCGCTACATGAGCATCACCTCAGAGCGAAGTGTGCCTGCTGACGTGTTTCAGATCCAGGC AACCTCTGTCTACCCTGGTGCCTACAATGCCTTTCAGATCCGTTCTGGAAACACACAGGG GGACTTCTACATTAGG
	INTRON 9 - 10	5480742	5481560			819	GTAAGGTGCTTCTTTACCCACACTC..........TTCTACTGTCCACTGTACACTGCAG
10	EXON 10	5481561	5481853	0	-	293	CAAATCAACAATGTCAGCGCCATGCTGGTCCTCGCCAGGCCAGTGACGGGACCCCGGGAG TACGTGTTGGACCTGGAGATGGTCACCATGAATTCCCTTATGAGCTACCGGGCCAGCTCT GTACTGAGACTCACGGTCTTTGTGGGAGCCTATACCTTCTGAAGACCCTCAGGGAAGGGC CATGTGGGGGCCCCCTTCCCCCTCCCATAGCTTAAGCAGCCCCGGGGGCTTAGGGATGAC CGTTCTGCTTAAAGGAACTATGATGTGAAGGACAATAAAGGGAGAAAGAAGGA
	3' upstream sequence						GTCCTGGCTGAGGTGGGTGAGTAACCTCAGCCCGGGAAGGGGCTGGCCTGCGAGAGGGGC AGGTGAGTTCCACACAAGGGGTCCTCTCCAGTCAGGCTGAGGTTTCAGAGCCAAGGTCAT TCTTCAGAATCAGCCTGAGCAGTGGGCAGTGGTGGCGCACACTTTTAATCCCAGCACTCA GGGGAGACAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCCTGATCTACAGAGTTCAAG GACAGCCAGGGCTACACAGAGAAACCCTGTCTCAGGAGGAAGAAAAAAAAAAAAAAAAAA AAAAGGCCTGAGCAGGGAGTTCTGAAGAGTATGTACCTCAGGTCCTCACTCAAGAGCTTG GCTGATACTGGGCCCAGGAACCATGTTCTGGTCAGTGCTAGGAGTTTGGGGTTAGCATCC TAGCTCTACCCCAAGCTCTGCACTTGTACAAGCCTCTGGTCTCCAGTCACTAGAATGAGG CAGCTGGATTGAGAAACTTTTTGACCGGGGGCCATCTAATTACACTCAAACATACAGTGC CTTATTGACCCCATCTCTCTGACCAGGGCATTCCCAGCCCCTAAGGAGTGTTTATCTATT ATCCAGCCATCCATATTTAGGGTCTGGCTCTATGTAAGTACTTATTAAACATGGGTGTGC ACAACCATGTTTAGCCCAGGAGCTTGCCTTAAAAAGAACCATGGTGTGGTGCCCCACACC TTTAATTTCAGGTCTTGGAAGGTAGACCCAGAAAAACTGGGAGTTCTAGGCTAGACTGGG TTACAGAGCAAGTTTTAGGCCAAGCTGGTTTTAGGAATGGGTAAGGACACTGTACAGGAC TGCGGATCATTGCTTTTTGGAAGAGGAATTGCCTAGTAGGTGTGAGGCTCTGGGTTCCGC TGCTAGCACCACCACACACAACAGTTGGCTCAGCAGTGTAGTCTTCCAACCCCTGTAGAT TTCAGAAGGACCTTGGCATTGCTTCCTTAACAGCCGAGAC..........