MoG+ -Mouse Genome database with high added value-

Target CDS Information

Gene Symbol (Gene ID)

Efemp2 (ENSMUSG00000024909)

Cross Reference

EMBL	AC126029
GO	GO:0005509, GO:0005578, GO:0070062, ...show all
goslim_goa	GO:0003674, GO:0005575, GO:0005576, ...show all
MGI_trans_name	Efemp2-009
OTTP	OTTMUSP00000052423
OTTT	OTTMUST00000094316
UniParc	UPI0001F7937C
Uniprot/SPTREMBL	E9Q2A0
Vega_transcript	Efemp2-009, OTTMUST00000094316
Vega_translation	222089, OTTMUSP00000052423

Definition

protein_id:ENSMUSP00000132194
translation:

MKCINHYGGYLCLPRSAAVISDLHGEGPPPPAAHAQQPNPCPQGYEPDEQESCVDVDECT
QALHDCRPSQDCHNLPGSYQCTCPDGYRKIGPECVDIDECRYRYCQHRCVNLPGSFRCQC
EPGFQLGPNNRSCVDVNECDMGAPCEQRCFNSY

Chromosome

Length
Position(start - end)

2145
5476110 - 5478256

Orient to Chromosome

plus

Link

Location : (19:5476110-5478256)
/

Detail Map

name	Efemp2 (ENSMUSG00000024909)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : Efemp2 note : epidermal growth factor-containing fibulin-like extracellular matrix protein 2 [Source:MGI Symbol;Acc:MGI:1891209]

name	Efemp2 (ENSMUSG00000024909)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000167304

name	Efemp2 (ENSMUSG00000024909)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000166303

name	Efemp2 (ENSMUSG00000024909)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000165485

name	Efemp2 (ENSMUSG00000024909)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000166253

name	Efemp2 (ENSMUSG00000024909)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000167371

name	Efemp2 (ENSMUSG00000024909)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000167855

name	Efemp2 (ENSMUSG00000024909)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000070118

name	Efemp2 (ENSMUSG00000024909)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000169943

name	Efemp2 (ENSMUSG00000024909)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000164204

name	Efemp2 (ENSMUSG00000024909)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000167827

name	Efemp2 (ENSMUSG00000024909)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000164388

name	Efemp2 (ENSMUSG00000024909)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000168330

name	Efemp2 (ENSMUSG00000024909) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:Efemp2-004 Vega_transcript:OTTMUST00000094310 Uniprot/SPTREMBL:E9Q1U0 EMBL:AC126029 GO:GO:0005509 GO:GO:0005578 GO:GO:0070062 GO:GO:1903561 MGI_trans_name:Efemp2-004 Vega_translation:222084 Vega_translation:OTTMUSP00000052418 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005576 goslim_goa:GO:0005578 goslim_goa:GO:0043167 goslim_goa:GO:0043226 OTTP:OTTMUSP00000052418 OTTT:OTTMUST00000094310 UniParc:UPI0001F79381
definition	note : transcript_id=ENSMUST00000167304 protein_id : ENSMUSP00000129982 translation : MLPFASCLPGSLLLWAFLLLLLGAASPQDPEEPDSYTECTDGYEWDADSQHCRDVNECLTIPEACKGEMKCINHYGGYLCLPRSAAVISDLHGEGPPPPAAHAQQPNPCPQGYEPDEQESCVDVDECT

name	Efemp2 (ENSMUSG00000024909) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:Efemp2-005 Vega_transcript:OTTMUST00000094311 Uniprot/SPTREMBL:E9Q8E0 EMBL:AC126029 GO:GO:0005578 GO:GO:0070062 GO:GO:1903561 MGI_trans_name:Efemp2-005 Vega_translation:222085 Vega_translation:OTTMUSP00000052419 goslim_goa:GO:0005575 goslim_goa:GO:0005576 goslim_goa:GO:0005578 goslim_goa:GO:0043226 OTTP:OTTMUSP00000052419 OTTT:OTTMUST00000094311 UniParc:UPI0001F79380
definition	note : transcript_id=ENSMUST00000166303 protein_id : ENSMUSP00000128827 translation : MHSMGFRRHSLRMLPFASCLPGSLLLWAFLLLLLGAASPQDPEEPDSYTECTDGYEWDADSQHCRD

name	Efemp2 (ENSMUSG00000024909) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS29466.1 Uniprot/SWISSPROT:Q9WVJ9 RefSeq_peptide:NP_067449 RefSeq_mRNA:NM_021474.3 RefSeq_mRNA_predicted:XM_006531808 RefSeq_peptide_predicted:XP_006531870.1 RefSeq_peptide_predicted:XP_006531871.1 RefSeq_peptide_predicted:XP_006531872.1 Vega_transcript:Efemp2-001 Vega_transcript:OTTMUST00000094312 Uniprot/SPTREMBL:Q542X5 UCSC:uc008gdl.2 Fantom:0610011K11 EMBL:AF104223 EMBL:AK075585 EMBL:BC012269 EMBL:CH466612 GO:GO:0005509 GO:GO:0005578 GO:GO:0070062 GO:GO:1903561 MGI_trans_name:Efemp2-001 Vega_translation:222086 Vega_translation:OTTMUSP00000052420 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005576 goslim_goa:GO:0005578 goslim_goa:GO:0043167 goslim_goa:GO:0043226 protein_id:AAD45219.1 protein_id:AAH12269.1 protein_id:BAC35838.1 protein_id:EDL33138.1 protein_id:EDL33139.1 OTTP:OTTMUSP00000052420 OTTT:OTTMUST00000094312 Reactome:R-MMU-1474244 Reactome:R-MMU-1566948 Reactome:R-MMU-2129379 UniParc:UPI0000001914
definition	note : transcript_id=ENSMUST00000165485 protein_id : ENSMUSP00000133016 translation : MLPFASCLPGSLLLWAFLLLLLGAASPQDPEEPDSYTECTDGYEWDADSQHCRDVNECLTIPEACKGEMKCINHYGGYLCLPRSAAVISDLHGEGPPPPAAHAQQPNPCPQGYEPDEQESCVDVDECTQALHDCRPSQDCHNLPGSYQCTCPDGYRKIGPECVDIDECRYRYCQHRCVNLPGSFRCQCEPGFQLGPNNRSCVDVNECDMGAPCEQRCFNSYGTFLCRCNQGYELHRDGFSCSDIDECGYSSYLCQYRCVNEPGRFSCHCPQGYQLLATRLCQDIDECETGAHQCSEAQTCVNFHGGYRCVDTNRCVEPYVQVSDNRCLCPASNPLCREQPSSIVHRYMSITSERSVPADVFQIQATSVYPGAYNAFQIRSGNTQGDFYIRQINNVSAMLVLARPVTGPREYVLDLEMVTMNSLMSYRASSVLRLTVFVGAYTF

name	Efemp2 (ENSMUSG00000024909) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:Efemp2-010 Vega_transcript:OTTMUST00000094314 Uniprot/SPTREMBL:E9Q3F3 UCSC:uc008gdl.2 EMBL:AC126029 GO:GO:0005509 GO:GO:0005578 GO:GO:0070062 GO:GO:1903561 MGI_trans_name:Efemp2-010 Vega_translation:222087 Vega_translation:OTTMUSP00000052421 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005576 goslim_goa:GO:0005578 goslim_goa:GO:0043167 goslim_goa:GO:0043226 OTTP:OTTMUSP00000052421 OTTT:OTTMUST00000094314 UniParc:UPI0001F7937F
definition	note : transcript_id=ENSMUST00000166253 protein_id : ENSMUSP00000127312 translation : MLPFASCLPGSLLLWAFLLLLLGAASPQDPEEPDSYTECTDGYEWDADSQHCRDIDECRYRYCQHRCVNLPGSFRCQCEPGFQLGPNNRSCVDVNECDMGAPCEQRCFNSYGTFLCRCNQGYELHRDGFSCSDIDECGYSSYLCQYRCVNEPGRFSCHCPQGYQLLATRLCQDIDECETGAHQCSEAQTCVNFHGGYRCVDTNRCVEPYVQVSDNRCLCPASNPLCREQPSSIVHRYMSITSERSVPADVFQIQATSVYPGAYNAFQIRSGNTQGDFYIR

name	Efemp2 (ENSMUSG00000024909) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:Efemp2-003 Vega_transcript:OTTMUST00000094315 Uniprot/SPTREMBL:E9Q3N9 UCSC:uc008gdl.2 EMBL:AC126029 GO:GO:0005509 GO:GO:0005578 GO:GO:0070062 GO:GO:1903561 MGI_trans_name:Efemp2-003 Vega_translation:222088 Vega_translation:OTTMUSP00000052422 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005576 goslim_goa:GO:0005578 goslim_goa:GO:0043167 goslim_goa:GO:0043226 OTTP:OTTMUSP00000052422 OTTT:OTTMUST00000094315 UniParc:UPI0001F7937E
definition	note : transcript_id=ENSMUST00000167371 protein_id : ENSMUSP00000129746 translation : MLPFASCLPGSLLLWAFLLLLLGAASPQDPEEPDSYTECTDGYEWDADSQHCRDVNECLTIPEACKGEMKCINHYGGYLCLPRSAAVISDLHGEGPPPPAAHAQQPNPCPQGYEPDEQESCVDIDECRYRYCQHRCVNLPGSFRCQCEPGFQLGPNNRSCVDVNECDMGAPCEQRCFNSYGTFLCRCNQGYELHRDGFSCSDIDECGYSSYLCQYRCVNEPGRFSCHCPQGYQLLATRLCQDIDECETGAHQCSEAQTCVNFHGGYRCVDTNRCVEPYVQVSDNRCLCPASNPLCREQPSSIVHRYMSITSERSVPADVFQIQATSVYPGAYNAFQIRSGNTQGDFYIRQINNVSAMLVLARPVTGPREYVLDLEMVTMNSLMSYRASSVLRLTVFVGAYTF

name	Efemp2 (ENSMUSG00000024909) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:Efemp2-009 Vega_transcript:OTTMUST00000094316 Uniprot/SPTREMBL:E9Q2A0 EMBL:AC126029 GO:GO:0005509 GO:GO:0005578 GO:GO:0070062 GO:GO:1903561 MGI_trans_name:Efemp2-009 Vega_translation:222089 Vega_translation:OTTMUSP00000052423 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005576 goslim_goa:GO:0005578 goslim_goa:GO:0043167 goslim_goa:GO:0043226 OTTP:OTTMUSP00000052423 OTTT:OTTMUST00000094316 UniParc:UPI0001F7937C
definition	note : transcript_id=ENSMUST00000167855 protein_id : ENSMUSP00000132194 translation : MKCINHYGGYLCLPRSAAVISDLHGEGPPPPAAHAQQPNPCPQGYEPDEQESCVDVDECTQALHDCRPSQDCHNLPGSYQCTCPDGYRKIGPECVDIDECRYRYCQHRCVNLPGSFRCQCEPGFQLGPNNRSCVDVNECDMGAPCEQRCFNSY

name	Efemp2 (ENSMUSG00000024909) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS50358.1 RefSeq_peptide:NP_001157824 RefSeq_mRNA:NM_001164352.1 RefSeq_peptide_predicted:XP_006531870.1 RefSeq_peptide_predicted:XP_006531872.1 Vega_transcript:Efemp2-002 Vega_transcript:OTTMUST00000094317 Uniprot/SPTREMBL:G5E8D6 UCSC:uc012bgy.1 EMBL:AC126029 EMBL:CH466612 GO:GO:0005509 GO:GO:0005578 GO:GO:0070062 GO:GO:0070062 GO:GO:1903561 GO:GO:1903561 MGI_trans_name:Efemp2-002 Vega_translation:222090 Vega_translation:OTTMUSP00000052424 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005576 goslim_goa:GO:0005578 goslim_goa:GO:0043167 goslim_goa:GO:0043226 protein_id:EDL33141.1 OTTP:OTTMUSP00000052424 OTTT:OTTMUST00000094317 UniParc:UPI0000355AC2
definition	note : transcript_id=ENSMUST00000070118 protein_id : ENSMUSP00000064719 translation : MGGAVAETPDFCPPPPSLRMLPFASCLPGSLLLWAFLLLLLGAASPQDPEEPDSYTECTDGYEWDADSQHCRDVNECLTIPEACKGEMKCINHYGGYLCLPRSAAVISDLHGEGPPPPAAHAQQPNPCPQGYEPDEQESCVDVDECTQALHDCRPSQDCHNLPGSYQCTCPDGYRKIGPECVDIDECRYRYCQHRCVNLPGSFRCQCEPGFQLGPNNRSCVDVNECDMGAPCEQRCFNSYGTFLCRCNQGYELHRDGFSCSDIDECGYSSYLCQYRCVNEPGRFSCHCPQGYQLLATRLCQDIDECETGAHQCSEAQTCVNFHGGYRCVDTNRCVEPYVQVSDNRCLCPASNPLCREQPSSIVHRYMSITSERSVPADVFQIQATSVYPGAYNAFQIRSGNTQGDFYIRQINNVSAMLVLARPVTGPREYVLDLEMVTMNSLMSYRASSVLRLTVFVGAYTF

name	Efemp2 (ENSMUSG00000024909) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:Efemp2-014 Vega_transcript:OTTMUST00000094319 Uniprot/SPTREMBL:E9PYW6 EMBL:AC126029 GO:GO:0005578 GO:GO:0070062 GO:GO:1903561 MGI_trans_name:Efemp2-014 Vega_translation:222091 Vega_translation:OTTMUSP00000052425 goslim_goa:GO:0005575 goslim_goa:GO:0005576 goslim_goa:GO:0005578 goslim_goa:GO:0043226 OTTP:OTTMUSP00000052425 OTTT:OTTMUST00000094319 UniParc:UPI0001F7937D
definition	note : transcript_id=ENSMUST00000169943 protein_id : ENSMUSP00000126477 translation : MLPFASCLPGSLLLWAFLLLLLGAASPQDPEEPDSYTECTDGYEWDADSQHCRGPAQVTGCAQQAPLCRCQRVPDHPGGLQG

name	Efemp2 (ENSMUSG00000024909) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:Efemp2-007 Vega_transcript:OTTMUST00000094320 Uniprot/SPTREMBL:F7AYH6 GO:GO:0005509 GO:GO:0005578 GO:GO:0070062 GO:GO:1903561 MGI_trans_name:Efemp2-007 Vega_translation:222092 Vega_translation:OTTMUSP00000052426 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005576 goslim_goa:GO:0005578 goslim_goa:GO:0043167 goslim_goa:GO:0043226 OTTP:OTTMUSP00000052426 OTTT:OTTMUST00000094320 UniParc:UPI0001F79378
definition	codon_start : 3 note : transcript_id=ENSMUST00000164204 protein_id : ENSMUSP00000128414 translation : XLLLLGAASPQDPEEPDSYTECTDGYEWDADSQHCRDVNECLTIPEACKGEMKCINHYGGYLCLPRSAAVISDLHDGHHEFPYELPGQLCTETHGLCGSLYLLKTLREGPCGGPLPPPIA

name	Efemp2 (ENSMUSG00000024909) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:Efemp2-006 Vega_transcript:OTTMUST00000094321 Uniprot/SPTREMBL:E9Q2T8 UCSC:uc012bgy.1 EMBL:AC126029 GO:GO:0005509 GO:GO:0005578 GO:GO:0070062 GO:GO:1903561 MGI_trans_name:Efemp2-006 Vega_translation:222093 Vega_translation:OTTMUSP00000052427 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005576 goslim_goa:GO:0005578 goslim_goa:GO:0043167 goslim_goa:GO:0043226 OTTP:OTTMUSP00000052427 OTTT:OTTMUST00000094321 UniParc:UPI0001F79379
definition	note : transcript_id=ENSMUST00000167827 protein_id : ENSMUSP00000127478 translation : MKCINHYGGYLCLPRSAAVISDLHGEGPPPPAAHAQQPNPCPQGYEPDEQESCVDVDECTQALHDCRPSQDCHNLPGSYQCTCPDGYRKIGPECVDIDECRYRYCQHRCVNLPGSFRCQCEPGFQLGPNNRSCVDVNECDMGAPCEQRCFNSYGTFLCRCNQGYELHRDGFSCSDIDECGYSSYLCQYRCV

name	Efemp2 (ENSMUSG00000024909) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:Efemp2-011 Vega_transcript:OTTMUST00000094322 Uniprot/SPTREMBL:F6Z1C2 GO:GO:0005509 GO:GO:0005578 GO:GO:0070062 GO:GO:1903561 MGI_trans_name:Efemp2-011 Vega_translation:222094 Vega_translation:OTTMUSP00000052428 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005576 goslim_goa:GO:0005578 goslim_goa:GO:0043167 goslim_goa:GO:0043226 OTTP:OTTMUSP00000052428 OTTT:OTTMUST00000094322 UniParc:UPI0001F7937A
definition	codon_start : 3 note : transcript_id=ENSMUST00000164388 protein_id : ENSMUSP00000131979 translation : XYSSYLCQYRCVNEPGRFSCHCPQGYQLLATRLCQDIDECETGAHQCSEAQTCVNFHGGYRCVDTNRCVEPYVQVSDNRCLCPASNPLCREQPSSIVHRYMSITSERSVPADVFQIQATSVYPGAYNAFQIRSGNTQGDFYIRVRCFFTHTQLTQVI

name	Efemp2 (ENSMUSG00000024909) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:Efemp2-008 Vega_transcript:OTTMUST00000094323 Uniprot/SPTREMBL:F6R0V7 EMBL:AC126029 GO:GO:0005578 GO:GO:0070062 GO:GO:1903561 MGI_trans_name:Efemp2-008 Vega_translation:222095 Vega_translation:OTTMUSP00000052429 goslim_goa:GO:0005575 goslim_goa:GO:0005576 goslim_goa:GO:0005578 goslim_goa:GO:0043226 OTTP:OTTMUSP00000052429 OTTT:OTTMUST00000094323 UniParc:UPI0001F7937B
definition	note : transcript_id=ENSMUST00000168330 protein_id : ENSMUSP00000130003 translation : SCWLQGSAKILTSVKQVHTNVLRPKPVSTSMGVTAVWTPTVVWSPMSKCQTTFIHCAPLHEHHLRAKCAC

name
type	misc_feature
link
xref
definition	note : contig AC126029.3 1..173330(-1)

name	Efemp2 (ENSMUSG00000024909)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000094313 Vega_transcript:OTTMUST00000094313 MGI_trans_name:Efemp2-012 OTTT:OTTMUST00000094313
definition	note : retained_intron note : transcript_id=ENSMUST00000166558

name	Efemp2 (ENSMUSG00000024909)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000094318 Vega_transcript:OTTMUST00000094318 MGI_trans_name:Efemp2-013 OTTT:OTTMUST00000094318
definition	note : retained_intron note : transcript_id=ENSMUST00000167920

Polymorphisms
Exon
Sequence

Polymorphisms Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Efemp2 (ENSMUSG00000024909)
Transcript ID	ENSMUST00000167855

Reports
substitution
cSNPs	1
Insertion	9
Deletion	13
SNPs	-1kb 5469769(c.-6341A>G), 5469996(c.-6114C>T), 5470027(c.-6083A>G), 5470096(c.-6014G>A), 5470163(c.-5947C>T), 5470364(c.-5746A>G), 5470560(c.-5550C>A), 5470793(c.-5317A>G), 5470794(c.-5316A>G), 5470871(c.-5239T>C), 5471132(c.-4978G>A), 5471168(c.-4942A>G), 5471286(c.-4824A>G), 5471318(c.-4792T>C), 5471430(c.-4680C>T), 5471605(c.-4505A>G), 5471719(c.-4391G>C), 5472418(c.-3692T>C), 5472458(c.-3652C>T), 5472725(c.-3385G>T), 5473055(c.-3055T>C), 5473117(c.-2993T>C), 5473320(c.-2790G>A), 5473568(c.-2542T>C), 5473586(c.-2524G>A), 5473690(c.-2420T>A), 5473758(c.-2352T>G), 5473765(c.-2345T>C), 5474055(c.-2055A>G), 5474063(c.-2047A>C), 5474095(c.-2015T>C), 5474102(c.-2008C>A), 5474103(c.-2007T>A), 5474219(c.-1891T>C), 5474530(c.-1580G>A), 5'UTR 5476073(c.-37C>T), CDS 5476244(c.135C>T), 3'UTR INTRON 5475468(c.-45+12T>A), 5475601(c.-45+145T>C), 5475705(c.-45+249T>C), 5475777(c.-44-289C>A), 5475798(c.-44-268C>G), 5475804(c.-44-262C>T), 5476290(c.163+18G>T), 5476295(c.163+23T>C), 5476536(c.163+264G>A), 5476544(c.163+272T>A), 5476593(c.163+321G>C), 5476649(c.163+377G>A), 5476684(c.163+412T>C), 5476708(c.163+436G>T), 5476784(c.163+512C>T), 5476786(c.163+514T>C), 5476787(c.163+515G>A), 5476809(c.163+537C>T), 5476843(c.163+571G>C), 5476865(c.163+593G>T), 5476902(c.163+630C>A), 5476931(c.164-631C>T), 5476932(c.164-630T>C), 5476934(c.164-628C>T), 5476965(c.164-597G>A), 5477267(c.164-295G>A), 5477393(c.164-169T>C), 5477857(c.287-70T>A), 5477862(c.287-65G>A), 5477864(c.287-63G>A), 5478093(c.403+50C>G), 5478100(c.403+57G>A), 5478126(c.404-75T>G), 5478162(c.404-39A>T), 5478164(c.404-37A>C), +1kb 5478342(c.86G>A), 5478365(c.109C>T), 5478601(c.345T>C), 5478628(c.372G>A), 5478629(c.373A>G), 5478712(c.456G>A), 5479035(c.779C>T), 5479124(c.868C>T), 5479201(c.945C>T), 5479279(c.1023C>T), 5479651(c.1395G>A), 5479927(c.1671T>G), 5479931(c.1675T>C), 5480043(c.1787C>T), 5480445(c.2189A>G), 5480460(c.2204T>C), 5480462(c.2206T>C), 5480508(c.2252G>A), 5480528(c.2272C>A), 5480558(c.2302C>T), 5480938(c.2682T>G), 5481089(c.2833G>A), 5481361(c.3105T>C), 5481390(c.3134A>G), 5481448(c.3192C>T), 5481554(c.3298C>A), 5481627(c.3371C>T), 5481790(c.3534C>T), 5482016(c.3760C>T), 5482459(c.4203G>T), 5482631(c.4375A>G), 5482692(c.4436G>A), 5482959(c.4703C>T), 5483094(c.4838A>G), 5483160(c.*4904C>T),
Insertions	-1kb 5472556 (c.-3554_-3553insCTCAC), 5473205 (c.-2905_-2904insT), 5474689 (c.-1424_-1421dupCGGG), 5'UTR CDS 3'UTR INTRON 5476644 (c.163+375dupG), 5476647 (c.163+375dupG), +1kb 5478351 (c.95_96insG), 5482450 (c.4194_4195insGTCTAT), 5482496 (c.4240_4241insA), 5482501 (c.*4245dupA),
Deletions	-1kb 5470333 (c.-5776_-5769delGGAAGGCA), 5471574 (c.-4535_-4533delAAC), 5471775 (c.-4334_-4332delCTT), 5471852 (c.-4257delC), 5472547 (c.-3562_-3561delCT), 5473014 (c.-3095_-3091delTTTTA), 5473710 (c.-2399_-2392delACAAACAA), 5473745 (c.-2364_-2363delTT), 5474741 (c.-1368_-1365delCCGC), 5'UTR CDS 3'UTR INTRON 5476458 (c.163+199delT), 5476607 (c.163+336_163+338delGTT), 5477375 (c.164-172_164-168delTTTTT), +1kb 5478377 (c.122_130delTCTGCCGCC),
coding sequence substitutions
premature termination by the nucleotide substitution	0
synonymous num	1
non-synonymous num	0
synonymous substitutions	5476244 (p.Tyr45Tyr),
non-synonymous substitutions
B6 transcript (ENSMUST00000167855)	MKCINHYGGYLCLPRSAAVISDLHGEGPPPPAAHAQQPNPCPQGYEPDEQESCVDVDECT QALHDCRPSQDCHNLPGSYQCTCPDGYRKIGPECVDIDECRYRYCQHRCVNLPGSFRCQC EPGFQLGPNNRSCVDVNECDMGAPCEQRCFNSY
MSMv4 transcript	MKCINHYGGYLCLPRSAAVISDLHGEGPPPPAAHAQQPNPCPQGYEPDEQESCVDVDECT QALHDCRPSQDCHNLPGSYQCTCPDGYRKIGPECVDIDECRYRYCQHRCVNLPGSFRCQC EPGFQLGPNNRSCVDVNECDMGAPCEQRCFNSY
homology	100.00 (153 / 153)

Exon Detail Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Efemp2 (ENSMUSG00000024909)
Transcript ID	ENSMUST00000167855


..........TAAGGAAGACCGGGTTATCGCCGCTAGCGGTCTGGGCCAGGCACGGGAAC
CCTGGACACGCAACCCTTTCCCGTCTAGGCCCGCCTTGAGACGTGGGCAACGCGAAGTCC
CGCCCATTCACCCCTTCCTGGGCGCTGGAGGCACCCAGACTCCGCCTCCAAGGCATGATC
TCCGCTGGGGGCGGAGGCGGAAACTGGGTGGGGGACTTGGATGGGAAGAGGCTCGGGAAA
GGGCTGGCACTGGGCCCTAGTGTCCTCCGCGCCCAAGTTCAAGCTTGCCCGCCTTCCCAG
GGGCTTCCATTCATTTCGGGCCAAGACTACTGCTGCCCTCTCCCCCATACTACTGTAGCT
TTGCGAAGGCACGGCTTGGGGAAGCAGTACCCCAAGTAAAGAGACCACCTGGAGGCCGTG
GATGTGGATGCAGAGGGAATTGGACAATTAATTTGGACAATTAATTAAGTTGGACGAGGG
TCCGGAAACCTTGGATGAAGTTTTAGGATCATCTAAGTGATGATGGTTTAACACTGGATA
AAATTCTGAAAGGAGTAGAATTTGAAGCTCTGAGGATTAAATGCCTAGTAGGTTCTGGGA
GGCGCAGAATCGGGTTACACGGAGGTGCGAATGCACAGCATGGGATTCCGGAGGCACAGG
TTAGATAGGGTCTAGGTGGGCAGAATAACATTTTGAGTGAAGGCCCGGGGTCCTTAGGTG
AGTTTGGGGGCCAAGCATCAAGGTCAGTGGCCTAAGGATCCAAACTTTGGGAAACTCTGG
CTGGGCGTCCGCAAGCGACTCCAGGCAGCGCCGCGGGGGACCGGGTGGGGGCCTGTGGCC
GGCCGGGGCGGAGAAGCCGGGGGGTCGGGGTCCCTCCCCCTGGCGCGGGCTCAGGAATCC
GCCGAAGGGCGGGCGGAGGCGCCGGGGTGGGCCGCGGCCGGCGGGCGGGCGGGGGGCGCT
TCCTGGGGCCGCGCGTCCAGTGAGCTGCGCGGTCCGTCCGTCCGTCCGCC
CGCCCGCAGGCACTGCTGGAGTCGACGC
GTGAGTGGCCTCCAGCGGAGGGAGG..........GCTCTTGGGAGCAGCGTCCCCACAG
GATCCCGAGGAGCCGGACAGCTACACG
GTGGGGACCGTGGGGTCACCAGCTT..........CTGGCCACATCGGGTTCCCTTCCAG
GAATGCACAGATGGCTATGAGTGGGATGCAGACAGCCAGCACTGCCGGG
GTGAGTCTCTGACTGGGGTACTAGC..........GTGCCCAGCAGGCCCCTCTCTGCAG
ATGTCAATGAGTGCCTGACCATCCCGGAGGCTTGCAAGGGTGAGATGAAATGCATCAACCACTACGGGGGTTATTTGTGTCTGCCTCGCTCTGCTGCCGTCATCAGTGATCTCCATGGTGAAGGACCTCCACCGCCAGCGGCCCATGCTCAACAACCAAACCCTTGCCCGCAGGGCTATGAGCCTGATGAACAGGAGAGCTGTGTGG
GTAAGCAAGGGCTGATCTGGTGCCT..........GAAGGCTGAATGCTGTCTCTCACAG
ATGTGGACGAGTGTACCCAGGCTTTGCATGACTGTCGCCCTAGTCAGGACTGCCATAACCTTCCTGGCTCCTACCAGTGCACCTGCCCTGATGGTTACCGAAAAATTGGACCCGAATGTGTGG
GTGAGTTCTGAGTGGCTCTGCTAGG..........TTTCCCTCCCCCACCTCCATCTCAG
ACATAGATGAGTGTCGTTACCGCTATTGCCAGCATCGATGTGTGAACCTGCCGGGCTCTTTTCGATGCCAGTGTGAGCCAGGCTTCCAGTTGGGACCTAACAACCGCTCTTGTGTGG
GTGAGGCTGTGCCAGACAAGGTTCT..........CTCCTGTTTGTCCTCGCACCCTCAG
ATGTGAATGAGTGTGACATGGGAGCCCCATGTGAGCAGCGCTGCTTCAACTCCTAT
GGGACCTTCCTGTGTCGCTGTAACCAGGGCTATGAGCTGCACCGGGATGGCTTCTCCTGC
AGCGGTGAGAGTCACTTGTGCTACTGGATACAGCATCCCCCCCCCCCCTGCCTCCCCCCC
CTCTGCCGCCTCCCTTAGCACTTGCAACATATTGGAGCAACTCCAGGCGCATGGTCATTT
GCTTGGGGCTTCCGCACGTCTCCTTGCACTCACAGGCCTCCCTAAGCTCCGTCTTGAGCT
TGTCGTTTGGCACTCCCAGCTTGAGGGGATGCTATGCTAGGGGCTTCTGAAGCTTGCCAG
AGAGACAGAGAAGATGGAGGTGCCAGTCTTCCTGAAAGTTGAGTCGACTTGCATTGGAAT
CCTACACTGGGAGAAGTTTTCTCTTCTTTCTGGGCACATGTCTACTGCAGACAGGTTATT
TGAGTATTAGGGGCAGTGATAACAGGCTTCATCAAATCTCAGGCAGAAATAGTGGGAAGC
ACCATTTGTTTATCACTTAAAATTTTCAGTCTCATTTAGTCTGGCCAGGGATGATTGACT
TTTGTAAAACAGGACATTAATATTCCTCCAGGTTGGCAGAACTGTGGAAAGCAAGCAGAG
AGGTCAGAGAAAGTACTGACTTTCATCTTTCCACTTACTGAGATTGACATGACTGTCCAA
GTTCAGAGGGGAAAGATGAGCCGGGCTGGGGTGTGAGCCCAGGCGTCTCACTGTGTTACC
TGGCATGCCCTCATTTACTTTATGCTTTACCGGGAAGCACAGGATCATTGGTGTTCGGTT
GTGTGAAAGGAACAAAAGCAAAGAGATAGGATGCTGCTCGGGGTAGGGTGGGGGGCACAC
ACTTAGCCCAAGTCTGGGCATTCTGACTGCATATTGCAAGACTTGAAAAGAACAGAGCGG
CTATCCCCTTGGGGCACCTGCTCATTTGACTGGCACAATGTGGATCCTTTCTAAAATGGG
TTAGTAGGACTTAGGCCCAAGCCTCTAGATTCTTGCTGCT..........

No.	Exon / Intron	Start	End	Start Phase	End Phase	Length	Sequence
	5' upstream sequence						..........TAAGGAAGACCGGGTTATCGCCGCTAGCGGTCTGGGCCAGGCACGGGAAC CCTGGACACGCAACCCTTTCCCGTCTAGGCCCGCCTTGAGACGTGGGCAACGCGAAGTCC CGCCCATTCACCCCTTCCTGGGCGCTGGAGGCACCCAGACTCCGCCTCCAAGGCATGATC TCCGCTGGGGGCGGAGGCGGAAACTGGGTGGGGGACTTGGATGGGAAGAGGCTCGGGAAA GGGCTGGCACTGGGCCCTAGTGTCCTCCGCGCCCAAGTTCAAGCTTGCCCGCCTTCCCAG GGGCTTCCATTCATTTCGGGCCAAGACTACTGCTGCCCTCTCCCCCATACTACTGTAGCT TTGCGAAGGCACGGCTTGGGGAAGCAGTACCCCAAGTAAAGAGACCACCTGGAGGCCGTG GATGTGGATGCAGAGGGAATTGGACAATTAATTTGGACAATTAATTAAGTTGGACGAGGG TCCGGAAACCTTGGATGAAGTTTTAGGATCATCTAAGTGATGATGGTTTAACACTGGATA AAATTCTGAAAGGAGTAGAATTTGAAGCTCTGAGGATTAAATGCCTAGTAGGTTCTGGGA GGCGCAGAATCGGGTTACACGGAGGTGCGAATGCACAGCATGGGATTCCGGAGGCACAGG TTAGATAGGGTCTAGGTGGGCAGAATAACATTTTGAGTGAAGGCCCGGGGTCCTTAGGTG AGTTTGGGGGCCAAGCATCAAGGTCAGTGGCCTAAGGATCCAAACTTTGGGAAACTCTGG CTGGGCGTCCGCAAGCGACTCCAGGCAGCGCCGCGGGGGACCGGGTGGGGGCCTGTGGCC GGCCGGGGCGGAGAAGCCGGGGGGTCGGGGTCCCTCCCCCTGGCGCGGGCTCAGGAATCC GCCGAAGGGCGGGCGGAGGCGCCGGGGTGGGCCGCGGCCGGCGGGCGGGCGGGGGGCGCT TCCTGGGGCCGCGCGTCCAGTGAGCTGCGCGGTCCGTCCGTCCGTCCGCC
1	EXON 1	5474747	5474774	-	-	28	CGCCCGCAGGCACTGCTGGAGTCGACGC
	INTRON 1 - 2	5474775	5475151			377	GTGAGTGGCCTCCAGCGGAGGGAGG..........GCTCTTGGGAGCAGCGTCCCCACAG
2	EXON 2	5475152	5475178	-	-	27	GATCCCGAGGAGCCGGACAGCTACACG
	INTRON 2 - 3	5475179	5475407			229	GTGGGGACCGTGGGGTCACCAGCTT..........CTGGCCACATCGGGTTCCCTTCCAG
3	EXON 3	5475408	5475456	-	-	49	GAATGCACAGATGGCTATGAGTGGGATGCAGACAGCCAGCACTGCCGGG
	INTRON 3 - 4	5475457	5476065			609	GTGAGTCTCTGACTGGGGTACTAGC..........GTGCCCAGCAGGCCCCTCTCTGCAG
4	EXON 4	5476066	5476272	-	1	207	ATGTCAATGAGTGCCTGACCATCCCGGAGGCTTGCAAGGGTGAGATGAAATGCATCAACC ACTACGGGGGTTATTTGTGTCTGCCTCGCTCTGCTGCCGTCATCAGTGATCTCCATGGTG AAGGACCTCCACCGCCAGCGGCCCATGCTCAACAACCAAACCCTTGCCCGCAGGGCTATG AGCCTGATGAACAGGAGAGCTGTGTGG
	INTRON 4 - 5	5476273	5477561			1289	GTAAGCAAGGGCTGATCTGGTGCCT..........GAAGGCTGAATGCTGTCTCTCACAG
5	EXON 5	5477562	5477684	1	1	123	ATGTGGACGAGTGTACCCAGGCTTTGCATGACTGTCGCCCTAGTCAGGACTGCCATAACC TTCCTGGCTCCTACCAGTGCACCTGCCCTGATGGTTACCGAAAAATTGGACCCGAATGTG TGG
	INTRON 5 - 6	5477685	5477926			242	GTGAGTTCTGAGTGGCTCTGCTAGG..........TTTCCCTCCCCCACCTCCATCTCAG
6	EXON 6	5477927	5478043	1	1	117	ACATAGATGAGTGTCGTTACCGCTATTGCCAGCATCGATGTGTGAACCTGCCGGGCTCTT TTCGATGCCAGTGTGAGCCAGGCTTCCAGTTGGGACCTAACAACCGCTCTTGTGTGG
	INTRON 6 - 7	5478044	5478200			157	GTGAGGCTGTGCCAGACAAGGTTCT..........CTCCTGTTTGTCCTCGCACCCTCAG
7	EXON 7	5478201	5478256	1	-	56	ATGTGAATGAGTGTGACATGGGAGCCCCATGTGAGCAGCGCTGCTTCAACTCCTAT
	3' upstream sequence						GGGACCTTCCTGTGTCGCTGTAACCAGGGCTATGAGCTGCACCGGGATGGCTTCTCCTGC AGCGGTGAGAGTCACTTGTGCTACTGGATACAGCATCCCCCCCCCCCCTGCCTCCCCCCC CTCTGCCGCCTCCCTTAGCACTTGCAACATATTGGAGCAACTCCAGGCGCATGGTCATTT GCTTGGGGCTTCCGCACGTCTCCTTGCACTCACAGGCCTCCCTAAGCTCCGTCTTGAGCT TGTCGTTTGGCACTCCCAGCTTGAGGGGATGCTATGCTAGGGGCTTCTGAAGCTTGCCAG AGAGACAGAGAAGATGGAGGTGCCAGTCTTCCTGAAAGTTGAGTCGACTTGCATTGGAAT CCTACACTGGGAGAAGTTTTCTCTTCTTTCTGGGCACATGTCTACTGCAGACAGGTTATT TGAGTATTAGGGGCAGTGATAACAGGCTTCATCAAATCTCAGGCAGAAATAGTGGGAAGC ACCATTTGTTTATCACTTAAAATTTTCAGTCTCATTTAGTCTGGCCAGGGATGATTGACT TTTGTAAAACAGGACATTAATATTCCTCCAGGTTGGCAGAACTGTGGAAAGCAAGCAGAG AGGTCAGAGAAAGTACTGACTTTCATCTTTCCACTTACTGAGATTGACATGACTGTCCAA GTTCAGAGGGGAAAGATGAGCCGGGCTGGGGTGTGAGCCCAGGCGTCTCACTGTGTTACC TGGCATGCCCTCATTTACTTTATGCTTTACCGGGAAGCACAGGATCATTGGTGTTCGGTT GTGTGAAAGGAACAAAAGCAAAGAGATAGGATGCTGCTCGGGGTAGGGTGGGGGGCACAC ACTTAGCCCAAGTCTGGGCATTCTGACTGCATATTGCAAGACTTGAAAAGAACAGAGCGG CTATCCCCTTGGGGCACCTGCTCATTTGACTGGCACAATGTGGATCCTTTCTAAAATGGG TTAGTAGGACTTAGGCCCAAGCCTCTAGATTCTTGCTGCT..........

Sequence Detail Report

Gene Symbol (Gene ID)	Efemp2 (ENSMUSG00000024909)
Transcript ID	ENSMUST00000167855

		SNP Information
Strain :
Sequence Retrieve :
Exon translate : CDS Start ( 1 ) - End ( 153 ) -
Strand :	forward reverse
Show sequence :	nucleotide amino acid
Color information